RNA–Protein interactions for RNA: ENST00000397647.7

PAX8-204, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-204ENST00000397647 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
PAX8-204ENST00000397647 PLEKHH2Q8IVE3 1493 aa17.44■□□□□ 0.38
PAX8-204ENST00000397647 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
PAX8-204ENST00000397647 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
PAX8-204ENST00000397647 RLBP1P12271 317 aa17.43■□□□□ 0.38
PAX8-204ENST00000397647 WDR7Q9Y4E6 1490 aa17.43■□□□□ 0.38
PAX8-204ENST00000397647 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
PAX8-204ENST00000397647 PCDHB15Q9Y5E8 787 aa17.43■□□□□ 0.38
PAX8-204ENST00000397647 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
PAX8-204ENST00000397647 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
PAX8-204ENST00000397647 FAM43AQ8N2R8 423 aa17.42■□□□□ 0.38
PAX8-204ENST00000397647 PANK2Q9BZ23 570 aa17.42■□□□□ 0.38
PAX8-204ENST00000397647 SENP3Q9H4L4 574 aaPredicted RBP17.42■□□□□ 0.38
PAX8-204ENST00000397647 ADCY10Q96PN6 1610 aa17.41■□□□□ 0.38
PAX8-204ENST00000397647 E9PSI1 815 aa17.41■□□□□ 0.38
PAX8-204ENST00000397647 BECN1Q14457 450 aa17.4■□□□□ 0.38
PAX8-204ENST00000397647 NKTRP30414 1462 aaKnown RBP17.4■□□□□ 0.38
PAX8-204ENST00000397647 PRDM15P57071 1507 aaPredicted RBP17.4■□□□□ 0.38
PAX8-204ENST00000397647 UBE2Q2Q8WVN8 375 aa17.4■□□□□ 0.38
PAX8-204ENST00000397647 TBC1D2Q9BYX2 928 aa17.4■□□□□ 0.38
PAX8-204ENST00000397647 CARD14Q9BXL6 1004 aa17.39■□□□□ 0.37
PAX8-204ENST00000397647 SHANK2Q9UPX8 1470 aa17.39■□□□□ 0.37
PAX8-204ENST00000397647 WWC1Q8IX03 1113 aa17.39■□□□□ 0.37
PAX8-204ENST00000397647 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
PAX8-204ENST00000397647 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
PAX8-204ENST00000397647 IFT140Q96RY7 1462 aa17.38■□□□□ 0.37
PAX8-204ENST00000397647 CCDC141Q6ZP82 1450 aa17.37■□□□□ 0.37
PAX8-204ENST00000397647 EIF3AQ14152 1382 aaKnown RBP17.37■□□□□ 0.37
PAX8-204ENST00000397647 CFAP70Q5T0N1 1121 aa17.36■□□□□ 0.37
PAX8-204ENST00000397647 RSPH6AQ9H0K4 717 aa17.35■□□□□ 0.37
PAX8-204ENST00000397647 MFAP1P55081 439 aaKnown RBP17.35■□□□□ 0.37
PAX8-204ENST00000397647 ANTXR1Q9H6X2 564 aa17.35■□□□□ 0.37
PAX8-204ENST00000397647 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
PAX8-204ENST00000397647 XRCC6P12956 609 aaKnown RBP eCLIP17.35■□□□□ 0.37
PAX8-204ENST00000397647 SYCP2Q9BX26 1530 aa17.35■□□□□ 0.37
PAX8-204ENST00000397647 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
PAX8-204ENST00000397647 INSRP06213 1382 aa17.33■□□□□ 0.37
PAX8-204ENST00000397647 SAMD9LQ8IVG5 1584 aa17.33■□□□□ 0.37
PAX8-204ENST00000397647 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
PAX8-204ENST00000397647 PDE3AQ14432 1141 aa17.32■□□□□ 0.36
PAX8-204ENST00000397647 NAP1L5Q96NT1 182 aaPredicted RBP17.32■□□□□ 0.36
PAX8-204ENST00000397647 MAPK8IP3Q9UPT6 1336 aa17.32■□□□□ 0.36
PAX8-204ENST00000397647 MYO5CQ9NQX4 1742 aa17.31■□□□□ 0.36
PAX8-204ENST00000397647 CDCA8Q53HL2 280 aa17.31■□□□□ 0.36
PAX8-204ENST00000397647 TCP11L2Q8N4U5 519 aa17.31■□□□□ 0.36
PAX8-204ENST00000397647 TBC1D32Q96NH3 1257 aa17.3■□□□□ 0.36
PAX8-204ENST00000397647 ABCA8O94911 1581 aa17.3■□□□□ 0.36
PAX8-204ENST00000397647 ARHGAP5Q13017 1502 aa17.3■□□□□ 0.36
PAX8-204ENST00000397647 GOLGA6L3A6NEY3 463 aa17.29■□□□□ 0.36
PAX8-204ENST00000397647 ASXL1Q8IXJ9 1541 aa17.29■□□□□ 0.36
PAX8-204ENST00000397647 AFAP1Q8N556 730 aa17.29■□□□□ 0.36
PAX8-204ENST00000397647 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
PAX8-204ENST00000397647 SLC12A5Q9H2X9 1139 aa17.28■□□□□ 0.36
PAX8-204ENST00000397647 CHGAP10645 457 aaKnown RBP17.28■□□□□ 0.36
PAX8-204ENST00000397647 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
PAX8-204ENST00000397647 TSR2Q969E8 191 aaKnown RBP17.28■□□□□ 0.36
PAX8-204ENST00000397647 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
PAX8-204ENST00000397647 MCM4P33991 863 aa17.27■□□□□ 0.36
PAX8-204ENST00000397647 L1TD1Q5T7N2 865 aaKnown RBP17.27■□□□□ 0.35
PAX8-204ENST00000397647 SYNJ2O15056 1496 aa17.26■□□□□ 0.35
PAX8-204ENST00000397647 NLRP1Q9C000 1473 aa17.26■□□□□ 0.35
PAX8-204ENST00000397647 CDC42BPBQ9Y5S2 1711 aa17.26■□□□□ 0.35
PAX8-204ENST00000397647 PIK3C2GO75747 1445 aa17.26■□□□□ 0.35
PAX8-204ENST00000397647 PMFBP1Q8TBY8 1022 aa17.25■□□□□ 0.35
PAX8-204ENST00000397647 TRAK1Q9UPV9 953 aa17.25■□□□□ 0.35
PAX8-204ENST00000397647 ADGRF5Q8IZF2 1346 aa17.25■□□□□ 0.35
PAX8-204ENST00000397647 TRAK2O60296 914 aa17.25■□□□□ 0.35
PAX8-204ENST00000397647 C22orf23Q9BZE7 217 aa17.25■□□□□ 0.35
PAX8-204ENST00000397647 FTSJ3Q8IY81 847 aaKnown RBP17.24■□□□□ 0.35
PAX8-204ENST00000397647 ARHGEF5Q12774 1597 aa17.23■□□□□ 0.35
PAX8-204ENST00000397647 MTHFSP49914 203 aa17.23■□□□□ 0.35
PAX8-204ENST00000397647 RWDD1Q9H446 243 aaPredicted RBP17.23■□□□□ 0.35
PAX8-204ENST00000397647 NUTM2DQ5VT03 806 aaPredicted RBP17.22■□□□□ 0.35
PAX8-204ENST00000397647 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
PAX8-204ENST00000397647 SCAF11Q99590 1463 aaKnown RBP17.21■□□□□ 0.35
PAX8-204ENST00000397647 TMEM132EQ6IEE7 984 aa17.21■□□□□ 0.35
PAX8-204ENST00000397647 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
PAX8-204ENST00000397647 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
PAX8-204ENST00000397647 ERCC6Q03468 1493 aa17.21■□□□□ 0.34
PAX8-204ENST00000397647 ITPRIPQ8IWB1 547 aa17.2■□□□□ 0.34
PAX8-204ENST00000397647 RUNDC1Q96C34 613 aa17.2■□□□□ 0.34
PAX8-204ENST00000397647 SAFB2Q14151 953 aaKnown RBP eCLIP17.2■□□□□ 0.34
PAX8-204ENST00000397647 EIF2AK4Q9P2K8 1649 aaKnown RBP17.2■□□□□ 0.34
PAX8-204ENST00000397647 NUP160Q12769 1436 aa17.2■□□□□ 0.34
PAX8-204ENST00000397647 KIF3BO15066 747 aa17.18■□□□□ 0.34
PAX8-204ENST00000397647 TTC37Q6PGP7 1564 aa17.18■□□□□ 0.34
PAX8-204ENST00000397647 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
PAX8-204ENST00000397647 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
PAX8-204ENST00000397647 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
PAX8-204ENST00000397647 FSD2A1L4K1 749 aa17.16■□□□□ 0.34
PAX8-204ENST00000397647 DZIP1LQ8IYY4 767 aaKnown RBP17.16■□□□□ 0.34
PAX8-204ENST00000397647 CHMP5Q9NZZ3 219 aa17.16■□□□□ 0.34
PAX8-204ENST00000397647 LAMC1P11047 1609 aa17.16■□□□□ 0.34
PAX8-204ENST00000397647 EXOSC9Q06265 439 aaKnown RBP17.16■□□□□ 0.34
PAX8-204ENST00000397647 TRAPPC8Q9Y2L5 1435 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 LNPKQ9C0E8 428 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 ABCC2Q92887 1545 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 ERBB4Q15303 1308 aa17.15■□□□□ 0.34
PAX8-204ENST00000397647 UNC13BO14795 1591 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms