RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
CAPN3-207ENST00000397200 THEMISQ8N1K5 641 aaPredicted RBP21.23■□□□□ 0.99
CAPN3-207ENST00000397200 KDM2AQ9Y2K7 1162 aa21.22■□□□□ 0.99
CAPN3-207ENST00000397200 STAC3Q96MF2 364 aa21.21■□□□□ 0.99
CAPN3-207ENST00000397200 TMEM2Q9UHN6 1383 aa21.21■□□□□ 0.99
CAPN3-207ENST00000397200 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
CAPN3-207ENST00000397200 MYOM2P54296 1465 aa21.19■□□□□ 0.98
CAPN3-207ENST00000397200 PPP1R15AO75807 674 aaPredicted RBP21.19■□□□□ 0.98
CAPN3-207ENST00000397200 SLIT1O75093 1534 aa21.19■□□□□ 0.98
CAPN3-207ENST00000397200 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
CAPN3-207ENST00000397200 HDGFP51858 240 aaKnown RBP21.18■□□□□ 0.98
CAPN3-207ENST00000397200 ARHGAP23Q9P227 1491 aa21.17■□□□□ 0.98
CAPN3-207ENST00000397200 VGFO15240 615 aaPredicted RBP21.17■□□□□ 0.98
CAPN3-207ENST00000397200 NUTM2DQ5VT03 806 aaPredicted RBP21.17■□□□□ 0.98
CAPN3-207ENST00000397200 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.17■□□□□ 0.98
CAPN3-207ENST00000397200 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
CAPN3-207ENST00000397200 LMTK3Q96Q04 1460 aa21.14■□□□□ 0.97
CAPN3-207ENST00000397200 ADGRF5Q8IZF2 1346 aa21.14■□□□□ 0.97
CAPN3-207ENST00000397200 PRAG1Q86YV5 1406 aa21.14■□□□□ 0.97
CAPN3-207ENST00000397200 NRXN1Q9ULB1 1477 aa21.13■□□□□ 0.97
CAPN3-207ENST00000397200 TXNDC2Q86VQ3 553 aa21.12■□□□□ 0.97
CAPN3-207ENST00000397200 SCAF11Q99590 1463 aaKnown RBP21.11■□□□□ 0.97
CAPN3-207ENST00000397200 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
CAPN3-207ENST00000397200 LTKP29376 864 aa21.1■□□□□ 0.97
CAPN3-207ENST00000397200 PIK3C2GO75747 1445 aa21.1■□□□□ 0.97
CAPN3-207ENST00000397200 POLR1AO95602 1720 aaPredicted RBP21.09■□□□□ 0.97
CAPN3-207ENST00000397200 ANKLE2Q86XL3 938 aa21.09■□□□□ 0.97
CAPN3-207ENST00000397200 TRPM1Q7Z4N2 1603 aa21.08■□□□□ 0.96
CAPN3-207ENST00000397200 KIAA1210Q9ULL0 1709 aa21.07■□□□□ 0.96
CAPN3-207ENST00000397200 HSPA2P54652 639 aa21.07■□□□□ 0.96
CAPN3-207ENST00000397200 PLEKHG1Q9ULL1 1385 aa21.06■□□□□ 0.96
CAPN3-207ENST00000397200 LAMC1P11047 1609 aa21.06■□□□□ 0.96
CAPN3-207ENST00000397200 IQGAP1P46940 1657 aa21.05■□□□□ 0.96
CAPN3-207ENST00000397200 MIER1Q8N108 512 aa21.05■□□□□ 0.96
CAPN3-207ENST00000397200 BCANQ96GW7 911 aa21.05■□□□□ 0.96
CAPN3-207ENST00000397200 SENP3Q9H4L4 574 aaPredicted RBP21.05■□□□□ 0.96
CAPN3-207ENST00000397200 SETBP1Q9Y6X0 1596 aa21.05■□□□□ 0.96
CAPN3-207ENST00000397200 RALGAPBQ86X10 1494 aa21.05■□□□□ 0.96
CAPN3-207ENST00000397200 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
CAPN3-207ENST00000397200 CFAP70Q5T0N1 1121 aa21.03■□□□□ 0.96
CAPN3-207ENST00000397200 AEBP2Q6ZN18 517 aaPredicted RBP21.02■□□□□ 0.96
CAPN3-207ENST00000397200 C14orf93Q9H972 538 aaKnown RBP21.02■□□□□ 0.96
CAPN3-207ENST00000397200 ALKQ9UM73 1620 aa21.02■□□□□ 0.96
CAPN3-207ENST00000397200 NCKAP5LQ9HCH0 1330 aa21.01■□□□□ 0.95
CAPN3-207ENST00000397200 ROCK2O75116 1388 aaKnown RBP21.01■□□□□ 0.95
CAPN3-207ENST00000397200 MED14O60244 1454 aa21■□□□□ 0.95
CAPN3-207ENST00000397200 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
CAPN3-207ENST00000397200 SETD1AO15047 1707 aaKnown RBP20.99■□□□□ 0.95
CAPN3-207ENST00000397200 NBPF1Q3BBV0 1214 aa20.98■□□□□ 0.95
CAPN3-207ENST00000397200 DIP2AQ14689 1571 aa20.98■□□□□ 0.95
CAPN3-207ENST00000397200 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
CAPN3-207ENST00000397200 STRCQ7RTU9 1775 aa20.97■□□□□ 0.95
CAPN3-207ENST00000397200 GPRASP1Q5JY77 1395 aa20.96■□□□□ 0.95
CAPN3-207ENST00000397200 CARD11Q9BXL7 1154 aa20.96■□□□□ 0.95
CAPN3-207ENST00000397200 SLC26A8Q96RN1 970 aa20.95■□□□□ 0.94
CAPN3-207ENST00000397200 ADGRB1O14514 1584 aa20.95■□□□□ 0.94
CAPN3-207ENST00000397200 ASXL1Q8IXJ9 1541 aa20.94■□□□□ 0.94
CAPN3-207ENST00000397200 TBX22Q9Y458 520 aa20.93■□□□□ 0.94
CAPN3-207ENST00000397200 TMEM132EQ6IEE7 984 aa20.93■□□□□ 0.94
CAPN3-207ENST00000397200 METP08581 1390 aa20.91■□□□□ 0.94
CAPN3-207ENST00000397200 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.93
CAPN3-207ENST00000397200 USP47Q96K76 1375 aa20.87■□□□□ 0.93
CAPN3-207ENST00000397200 CENPBP07199 599 aaPredicted RBP20.87■□□□□ 0.93
CAPN3-207ENST00000397200 PIK3R4Q99570 1358 aa20.87■□□□□ 0.93
CAPN3-207ENST00000397200 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
CAPN3-207ENST00000397200 EIF4G2P78344 907 aaKnown RBP eCLIP20.86■□□□□ 0.93
CAPN3-207ENST00000397200 STK26Q9P289 416 aa20.86■□□□□ 0.93
CAPN3-207ENST00000397200 KNDC1Q76NI1 1749 aa20.85■□□□□ 0.93
CAPN3-207ENST00000397200 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
CAPN3-207ENST00000397200 DMRT2Q9Y5R5 561 aa20.85■□□□□ 0.93
CAPN3-207ENST00000397200 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
CAPN3-207ENST00000397200 EIF3AQ14152 1382 aaKnown RBP20.84■□□□□ 0.93
CAPN3-207ENST00000397200 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
CAPN3-207ENST00000397200 PTPRUQ92729 1446 aa20.83■□□□□ 0.92
CAPN3-207ENST00000397200 ABCC11Q96J66 1382 aa20.82■□□□□ 0.92
CAPN3-207ENST00000397200 HSPA5P11021 654 aaKnown RBP20.82■□□□□ 0.92
CAPN3-207ENST00000397200 XRN1Q8IZH2 1706 aaKnown RBP20.81■□□□□ 0.92
CAPN3-207ENST00000397200 TECPR2O15040 1411 aa20.81■□□□□ 0.92
CAPN3-207ENST00000397200 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
CAPN3-207ENST00000397200 AMOTL2Q9Y2J4 779 aa20.81■□□□□ 0.92
CAPN3-207ENST00000397200 CPS1P31327 1500 aa20.8■□□□□ 0.92
CAPN3-207ENST00000397200 NWD1Q149M9 1564 aa20.78■□□□□ 0.92
CAPN3-207ENST00000397200 ST20-MTHFSA0A0A6YYL1 179 aa20.78■□□□□ 0.92
CAPN3-207ENST00000397200 KCNA6P17658 529 aa20.77■□□□□ 0.92
CAPN3-207ENST00000397200 PTCH1Q13635 1447 aa20.77■□□□□ 0.91
CAPN3-207ENST00000397200 CENPJQ9HC77 1338 aaPredicted RBP20.76■□□□□ 0.91
CAPN3-207ENST00000397200 HIRIP3Q9BW71 556 aaPredicted RBP20.76■□□□□ 0.91
CAPN3-207ENST00000397200 POGKQ9P215 609 aa20.76■□□□□ 0.91
CAPN3-207ENST00000397200 QRICH2Q9H0J4 1663 aa20.76■□□□□ 0.91
CAPN3-207ENST00000397200 SIRT1Q96EB6 747 aa20.75■□□□□ 0.91
CAPN3-207ENST00000397200 PRAM1Q96QH2 718 aa20.75■□□□□ 0.91
CAPN3-207ENST00000397200 FAM135BQ49AJ0 1406 aa20.75■□□□□ 0.91
CAPN3-207ENST00000397200 ROBO2Q9HCK4 1378 aa20.75■□□□□ 0.91
CAPN3-207ENST00000397200 DDX10Q13206 875 aaKnown RBP20.74■□□□□ 0.91
CAPN3-207ENST00000397200 STRCP1A6NGW2 1772 aa20.73■□□□□ 0.91
CAPN3-207ENST00000397200 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
CAPN3-207ENST00000397200 SAFB2Q14151 953 aaKnown RBP eCLIP20.72■□□□□ 0.91
CAPN3-207ENST00000397200 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
CAPN3-207ENST00000397200 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
CAPN3-207ENST00000397200 PLEKHH1Q9ULM0 1364 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms