RNA–Protein interactions for RNA: ENST00000397035.7

ATP2A3-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-204ENST00000397035 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
ATP2A3-204ENST00000397035 RRAGDQ9NQL2 400 aaPredicted RBP18.81■□□□□ 0.6
ATP2A3-204ENST00000397035 DDX19BQ9UMR2 479 aa18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 ABCC5O15440 1437 aa18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 EIF3AQ14152 1382 aaKnown RBP18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 XRCC6P12956 609 aaKnown RBP eCLIP18.8■□□□□ 0.61e-8■■□□□ 12.6
ATP2A3-204ENST00000397035 CAVIN1Q6NZI2 390 aaKnown RBP18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 MTHFSP49914 203 aa18.8■□□□□ 0.6
ATP2A3-204ENST00000397035 NESP48681 1621 aa18.79■□□□□ 0.6
ATP2A3-204ENST00000397035 C1orf115Q9H7X2 142 aa18.79■□□□□ 0.6
ATP2A3-204ENST00000397035 KIAA1211Q6ZU35 1233 aa18.79■□□□□ 0.6
ATP2A3-204ENST00000397035 TAOK2Q9UL54 1235 aa18.79■□□□□ 0.6
ATP2A3-204ENST00000397035 PRDM2Q13029 1718 aa18.79■□□□□ 0.6
ATP2A3-204ENST00000397035 BICRAQ9NZM4 1560 aa18.78■□□□□ 0.6
ATP2A3-204ENST00000397035 BIVM-ERCC5R4GMW8 1640 aa18.78■□□□□ 0.6
ATP2A3-204ENST00000397035 ZMYND15Q9H091 742 aa18.78■□□□□ 0.6
ATP2A3-204ENST00000397035 CHAF1AQ13111 956 aaPredicted RBP18.78■□□□□ 0.6
ATP2A3-204ENST00000397035 CFAP70Q5T0N1 1121 aa18.78■□□□□ 0.6
ATP2A3-204ENST00000397035 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
ATP2A3-204ENST00000397035 DRC7Q8IY82 874 aa18.76■□□□□ 0.59
ATP2A3-204ENST00000397035 EPRSP07814 1512 aaKnown RBP18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 SLC4A10Q6U841 1118 aa18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 KANK1Q14678 1352 aa18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 WWC1Q8IX03 1113 aa18.75■□□□□ 0.59
ATP2A3-204ENST00000397035 RIPK4P57078 832 aa18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 TRIM6-TRIM34B2RNG4 842 aa18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 ST18O60284 1047 aa18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 RRP9O43818 475 aaKnown RBP18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 EFCAB2Q5VUJ9 269 aa18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.74■□□□□ 0.59
ATP2A3-204ENST00000397035 A0A0U1RQG5 324 aaPredicted RBP18.73■□□□□ 0.59
ATP2A3-204ENST00000397035 TNNQ9UQP3 1299 aa18.73■□□□□ 0.59
ATP2A3-204ENST00000397035 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
ATP2A3-204ENST00000397035 SLC12A5Q9H2X9 1139 aa18.73■□□□□ 0.59
ATP2A3-204ENST00000397035 DISP3Q9P2K9 1392 aa18.72■□□□□ 0.59
ATP2A3-204ENST00000397035 MCCP23508 829 aa18.72■□□□□ 0.59
ATP2A3-204ENST00000397035 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
ATP2A3-204ENST00000397035 SPAG9O60271 1321 aaKnown RBP18.71■□□□□ 0.59
ATP2A3-204ENST00000397035 ROCK1Q13464 1354 aa18.71■□□□□ 0.59
ATP2A3-204ENST00000397035 NPM1P06748 294 aaKnown RBP eCLIP18.71■□□□□ 0.59
ATP2A3-204ENST00000397035 RSPH4AQ5TD94 716 aa18.71■□□□□ 0.59
ATP2A3-204ENST00000397035 KCNJ4P48050 445 aa18.71■□□□□ 0.58
ATP2A3-204ENST00000397035 SPINK5Q9NQ38 1064 aaPredicted RBP18.71■□□□□ 0.58
ATP2A3-204ENST00000397035 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
ATP2A3-204ENST00000397035 TOPBP1Q92547 1522 aa18.7■□□□□ 0.58
ATP2A3-204ENST00000397035 PRPF40AO75400 957 aaKnown RBP18.7■□□□□ 0.58
ATP2A3-204ENST00000397035 PCDHB15Q9Y5E8 787 aa18.7■□□□□ 0.58
ATP2A3-204ENST00000397035 GOLGA6L4A6NEF3 574 aa18.7■□□□□ 0.58
ATP2A3-204ENST00000397035 NOB1Q9ULX3 412 aaKnown RBP18.69■□□□□ 0.58
ATP2A3-204ENST00000397035 C9orf84Q5VXU9 1444 aa18.69■□□□□ 0.58
ATP2A3-204ENST00000397035 MVPQ14764 893 aaKnown RBP18.69■□□□□ 0.58
ATP2A3-204ENST00000397035 PLEKHH1Q9ULM0 1364 aa18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 CDK11BP21127 795 aaKnown RBP18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 RARSP54136 660 aaKnown RBP18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 SYAP1Q96A49 352 aaPredicted RBP18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 TBC1D32Q96NH3 1257 aa18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
ATP2A3-204ENST00000397035 TPM2P07951 284 aa18.67■□□□□ 0.58
ATP2A3-204ENST00000397035 NGEFQ8N5V2 710 aa18.67■□□□□ 0.58
ATP2A3-204ENST00000397035 PEG3Q9GZU2 1588 aa18.67■□□□□ 0.58
ATP2A3-204ENST00000397035 RILPL2Q969X0 211 aa18.67■□□□□ 0.58
ATP2A3-204ENST00000397035 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
ATP2A3-204ENST00000397035 TNPO1Q92973 898 aaKnown RBP18.66■□□□□ 0.58
ATP2A3-204ENST00000397035 HMOX1P09601 288 aa18.65■□□□□ 0.58
ATP2A3-204ENST00000397035 HDGFL2Q7Z4V5 671 aaPredicted RBP18.65■□□□□ 0.58
ATP2A3-204ENST00000397035 CHMP3Q9Y3E7 222 aa18.65■□□□□ 0.58
ATP2A3-204ENST00000397035 CCDC173Q0VFZ6 552 aa18.65■□□□□ 0.58
ATP2A3-204ENST00000397035 KDM2BQ8NHM5 1336 aa18.63■□□□□ 0.57
ATP2A3-204ENST00000397035 PARD3Q8TEW0 1356 aa18.63■□□□□ 0.57
ATP2A3-204ENST00000397035 NKTRP30414 1462 aaKnown RBP18.63■□□□□ 0.57
ATP2A3-204ENST00000397035 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
ATP2A3-204ENST00000397035 SSFA2P28290 1259 aa18.63■□□□□ 0.57
ATP2A3-204ENST00000397035 CLCN1P35523 988 aa18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 ESF1Q9H501 851 aaKnown RBP18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 NAP1L2Q9ULW6 460 aaPredicted RBP18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 NUCB2P80303 420 aa18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 XPCQ01831 940 aaPredicted RBP18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 CABP2Q9NPB3 220 aa18.62■□□□□ 0.57
ATP2A3-204ENST00000397035 TMEM57Q8N5G2 664 aa18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 CFAP44Q96MT7 982 aa18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 K7ELQ4 463 aaPredicted RBP18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 RLBP1P12271 317 aa18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 ATF7IPQ6VMQ6 1270 aa18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 ERCC6Q03468 1493 aa18.61■□□□□ 0.57
ATP2A3-204ENST00000397035 TROQ12816 1431 aaPredicted RBP18.6■□□□□ 0.57
ATP2A3-204ENST00000397035 UQCRHLA0A096LP55 91 aa18.6■□□□□ 0.57
ATP2A3-204ENST00000397035 UQCRHP07919 91 aa18.6■□□□□ 0.57
ATP2A3-204ENST00000397035 ZRSR1Q15695 479 aaKnown RBP18.6■□□□□ 0.57
ATP2A3-204ENST00000397035 AAMPQ13685 434 aa18.59■□□□□ 0.57
ATP2A3-204ENST00000397035 ZSCAN30Q86W11 494 aa18.59■□□□□ 0.57
ATP2A3-204ENST00000397035 HECW1Q76N89 1606 aa18.59■□□□□ 0.57
ATP2A3-204ENST00000397035 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
ATP2A3-204ENST00000397035 CDC45O75419 566 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms