RNA–Protein interactions for RNA: ENST00000396689.2

SPEG-204, Transcript of SPEG complex locus, humanhuman

TSL 1 (best) BASIC

Gene SPEG, Length 1,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-204ENST00000396689 ZFYVE9O95405 1425 aa27.62■■■□□ 2.01
SPEG-204ENST00000396689 KCNA6P17658 529 aa27.62■■■□□ 2.01
SPEG-204ENST00000396689 XIRP1Q702N8 1843 aaKnown RBP27.62■■■□□ 2.01
SPEG-204ENST00000396689 NUP155O75694 1391 aa27.6■■■□□ 2.01
SPEG-204ENST00000396689 PLEKHG1Q9ULL1 1385 aa27.59■■■□□ 2.01
SPEG-204ENST00000396689 MED1Q15648 1581 aaPredicted RBP27.58■■■□□ 2.01
SPEG-204ENST00000396689 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.58■■■□□ 2.01
SPEG-204ENST00000396689 NKTRP30414 1462 aaKnown RBP27.57■■■□□ 2
SPEG-204ENST00000396689 NWD1Q149M9 1564 aa27.57■■■□□ 2
SPEG-204ENST00000396689 RIMS2Q9UQ26 1411 aa27.56■■■□□ 2
SPEG-204ENST00000396689 SLC26A8Q96RN1 970 aa27.53■■■□□ 2
SPEG-204ENST00000396689 CHD2O14647 1828 aaKnown RBP27.51■■□□□ 1.99
SPEG-204ENST00000396689 PPP1R15AO75807 674 aaPredicted RBP27.51■■□□□ 1.99
SPEG-204ENST00000396689 TMEM94Q12767 1356 aa27.5■■□□□ 1.99
SPEG-204ENST00000396689 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
SPEG-204ENST00000396689 DIP2AQ14689 1571 aa27.49■■□□□ 1.99
SPEG-204ENST00000396689 BCANQ96GW7 911 aa27.49■■□□□ 1.99
SPEG-204ENST00000396689 SPHKAPQ2M3C7 1700 aa27.48■■□□□ 1.99
SPEG-204ENST00000396689 FAM135BQ49AJ0 1406 aa27.48■■□□□ 1.99
SPEG-204ENST00000396689 CHGAP10645 457 aaKnown RBP27.47■■□□□ 1.99
SPEG-204ENST00000396689 PROSER2Q86WR7 435 aaPredicted RBP27.47■■□□□ 1.99
SPEG-204ENST00000396689 NAIPQ13075 1403 aa27.47■■□□□ 1.99
SPEG-204ENST00000396689 PIK3R4Q99570 1358 aa27.47■■□□□ 1.99
SPEG-204ENST00000396689 NCOA3Q9Y6Q9 1424 aa27.45■■□□□ 1.98
SPEG-204ENST00000396689 MSH6P52701 1360 aa27.4■■□□□ 1.98
SPEG-204ENST00000396689 ADAMTS13Q76LX8 1427 aa27.4■■□□□ 1.98
SPEG-204ENST00000396689 HFM1A2PYH4 1435 aa27.39■■□□□ 1.97
SPEG-204ENST00000396689 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
SPEG-204ENST00000396689 TRPM2O94759 1503 aa27.36■■□□□ 1.97
SPEG-204ENST00000396689 NUTM2DQ5VT03 806 aaPredicted RBP27.35■■□□□ 1.97
SPEG-204ENST00000396689 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
SPEG-204ENST00000396689 RBM33Q96EV2 1170 aaKnown RBP27.32■■□□□ 1.96
SPEG-204ENST00000396689 KIF1BO60333 1816 aa27.32■■□□□ 1.96
SPEG-204ENST00000396689 SETBP1Q9Y6X0 1596 aa27.31■■□□□ 1.96
SPEG-204ENST00000396689 CLTCL1P53675 1640 aa27.3■■□□□ 1.96
SPEG-204ENST00000396689 SLAIN2Q9P270 581 aa27.28■■□□□ 1.96
SPEG-204ENST00000396689 TRIM52Q96A61 297 aa27.27■■□□□ 1.96
SPEG-204ENST00000396689 PHF23Q9BUL5 403 aaPredicted RBP27.26■■□□□ 1.95
SPEG-204ENST00000396689 RGS17Q9UGC6 210 aaPredicted RBP27.26■■□□□ 1.95
SPEG-204ENST00000396689 NRXN3Q9Y4C0 1643 aa27.26■■□□□ 1.95
SPEG-204ENST00000396689 ZNF326Q5BKZ1 582 aaKnown RBP27.25■■□□□ 1.95
SPEG-204ENST00000396689 C19orf44Q9H6X5 657 aa27.25■■□□□ 1.95
SPEG-204ENST00000396689 CADPS2Q86UW7 1296 aa27.24■■□□□ 1.95
SPEG-204ENST00000396689 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
SPEG-204ENST00000396689 NEXMIFQ5QGS0 1516 aa27.22■■□□□ 1.95
SPEG-204ENST00000396689 AMOTL2Q9Y2J4 779 aa27.22■■□□□ 1.95
SPEG-204ENST00000396689 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
SPEG-204ENST00000396689 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.21■■□□□ 1.95
SPEG-204ENST00000396689 SLC4A1APQ9BWU0 796 aaKnown RBP27.21■■□□□ 1.95
SPEG-204ENST00000396689 DCCP43146 1447 aa27.21■■□□□ 1.95
SPEG-204ENST00000396689 PTPRUQ92729 1446 aa27.19■■□□□ 1.94
SPEG-204ENST00000396689 C14orf37Q86TY3 774 aa27.19■■□□□ 1.94
SPEG-204ENST00000396689 RPGRIP1LQ68CZ1 1315 aa27.18■■□□□ 1.94
SPEG-204ENST00000396689 PHLPP1O60346 1717 aa27.17■■□□□ 1.94
SPEG-204ENST00000396689 ATF3P18847 181 aa27.17■■□□□ 1.94
SPEG-204ENST00000396689 VGFO15240 615 aaPredicted RBP27.16■■□□□ 1.94
SPEG-204ENST00000396689 JCADQ9P266 1359 aa27.12■■□□□ 1.93
SPEG-204ENST00000396689 AHDC1Q5TGY3 1603 aaPredicted RBP27.11■■□□□ 1.93
SPEG-204ENST00000396689 METP08581 1390 aa27.1■■□□□ 1.93
SPEG-204ENST00000396689 COL16A1Q07092 1604 aaPredicted RBP27.09■■□□□ 1.93
SPEG-204ENST00000396689 PPLO60437 1756 aa27.08■■□□□ 1.93
SPEG-204ENST00000396689 PRAG1Q86YV5 1406 aa27.07■■□□□ 1.92
SPEG-204ENST00000396689 SETD1AO15047 1707 aaKnown RBP27.05■■□□□ 1.92
SPEG-204ENST00000396689 FOXD1Q16676 465 aa27.05■■□□□ 1.92
SPEG-204ENST00000396689 PTCH1Q13635 1447 aa27.05■■□□□ 1.92
SPEG-204ENST00000396689 ADGRL3Q9HAR2 1447 aa27.05■■□□□ 1.92
SPEG-204ENST00000396689 POTEAQ6S8J7 498 aa27.04■■□□□ 1.92
SPEG-204ENST00000396689 MPHOSPH9Q99550 1183 aa27.04■■□□□ 1.92
SPEG-204ENST00000396689 CCDC144AA2RUR9 1427 aa27.03■■□□□ 1.92
SPEG-204ENST00000396689 SPATA31A6Q5VVP1 1343 aa27.02■■□□□ 1.92
SPEG-204ENST00000396689 MST1RQ04912 1400 aa27■■□□□ 1.91
SPEG-204ENST00000396689 BRINP3Q76B58 766 aa27■■□□□ 1.91
SPEG-204ENST00000396689 SHPRHQ149N8 1683 aa27■■□□□ 1.91
SPEG-204ENST00000396689 SETD5Q9C0A6 1442 aa26.99■■□□□ 1.91
SPEG-204ENST00000396689 ASXL1Q8IXJ9 1541 aa26.97■■□□□ 1.91
SPEG-204ENST00000396689 NALCNQ8IZF0 1738 aa26.97■■□□□ 1.91
SPEG-204ENST00000396689 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
SPEG-204ENST00000396689 NHSL1Q5SYE7 1610 aa26.95■■□□□ 1.91
SPEG-204ENST00000396689 SPATA31E1Q6ZUB1 1445 aa26.95■■□□□ 1.9
SPEG-204ENST00000396689 IFT172Q9UG01 1749 aa26.94■■□□□ 1.9
SPEG-204ENST00000396689 LRP6O75581 1613 aa26.9■■□□□ 1.9
SPEG-204ENST00000396689 ROBO2Q9HCK4 1378 aa26.9■■□□□ 1.9
SPEG-204ENST00000396689 RGL3Q3MIN7 710 aa26.89■■□□□ 1.9
SPEG-204ENST00000396689 LAMC1P11047 1609 aa26.88■■□□□ 1.89
SPEG-204ENST00000396689 LRRC59Q96AG4 307 aaKnown RBP26.88■■□□□ 1.89
SPEG-204ENST00000396689 ADGRF5Q8IZF2 1346 aa26.88■■□□□ 1.89
SPEG-204ENST00000396689 RAB3GAP2Q9H2M9 1393 aa26.86■■□□□ 1.89
SPEG-204ENST00000396689 C1orf167Q5SNV9 1468 aa26.86■■□□□ 1.89
SPEG-204ENST00000396689 TECPR2O15040 1411 aa26.85■■□□□ 1.89
SPEG-204ENST00000396689 ZNF772Q68DY9 489 aaPredicted RBP26.83■■□□□ 1.89
SPEG-204ENST00000396689 PIK3C2GO75747 1445 aa26.82■■□□□ 1.88
SPEG-204ENST00000396689 KNDC1Q76NI1 1749 aa26.82■■□□□ 1.88
SPEG-204ENST00000396689 CDC42BPGQ6DT37 1551 aa26.81■■□□□ 1.88
SPEG-204ENST00000396689 MEX3CQ5U5Q3 659 aaKnown RBP26.81■■□□□ 1.88
SPEG-204ENST00000396689 LRPPRCP42704 1394 aaKnown RBP26.81■■□□□ 1.88
SPEG-204ENST00000396689 ABCC11Q96J66 1382 aa26.81■■□□□ 1.88
SPEG-204ENST00000396689 HRCP23327 699 aa26.78■■□□□ 1.88
SPEG-204ENST00000396689 SIRT1Q96EB6 747 aa26.77■■□□□ 1.88
SPEG-204ENST00000396689 MYOM2P54296 1465 aa26.76■■□□□ 1.87
SPEG-204ENST00000396689 NRXN1Q9ULB1 1477 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms