RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 CPS1P31327 1500 aa16.68■□□□□ 0.26
NDUFA9-202ENST00000396655 PPP4R3CPQ6ZMV5 832 aa16.67■□□□□ 0.26
NDUFA9-202ENST00000396655 TMEM131LA2VDJ0 1609 aa16.64■□□□□ 0.25
NDUFA9-202ENST00000396655 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.64■□□□□ 0.25
NDUFA9-202ENST00000396655 MED1Q15648 1581 aaPredicted RBP16.64■□□□□ 0.25
NDUFA9-202ENST00000396655 ZFYVE9O95405 1425 aa16.62■□□□□ 0.25
NDUFA9-202ENST00000396655 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
NDUFA9-202ENST00000396655 SPHKAPQ2M3C7 1700 aa16.6■□□□□ 0.25
NDUFA9-202ENST00000396655 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
NDUFA9-202ENST00000396655 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
NDUFA9-202ENST00000396655 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
NDUFA9-202ENST00000396655 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
NDUFA9-202ENST00000396655 TRPM2O94759 1503 aa16.57■□□□□ 0.24
NDUFA9-202ENST00000396655 CHGAP10645 457 aaKnown RBP16.57■□□□□ 0.24
NDUFA9-202ENST00000396655 HSPA1LP34931 641 aa16.57■□□□□ 0.24
NDUFA9-202ENST00000396655 PPP1R15AO75807 674 aaPredicted RBP16.56■□□□□ 0.24
NDUFA9-202ENST00000396655 KCNA6P17658 529 aa16.56■□□□□ 0.24
NDUFA9-202ENST00000396655 TBX22Q9Y458 520 aa16.56■□□□□ 0.24
NDUFA9-202ENST00000396655 TOM1O60784 492 aa16.55■□□□□ 0.24
NDUFA9-202ENST00000396655 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
NDUFA9-202ENST00000396655 SETD5Q9C0A6 1442 aa16.54■□□□□ 0.24
NDUFA9-202ENST00000396655 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
NDUFA9-202ENST00000396655 SLC26A8Q96RN1 970 aa16.54■□□□□ 0.24
NDUFA9-202ENST00000396655 SCAF1Q9H7N4 1312 aaKnown RBP16.53■□□□□ 0.24
NDUFA9-202ENST00000396655 HRCP23327 699 aa16.53■□□□□ 0.24
NDUFA9-202ENST00000396655 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
NDUFA9-202ENST00000396655 BCANQ96GW7 911 aa16.52■□□□□ 0.24
NDUFA9-202ENST00000396655 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.24
NDUFA9-202ENST00000396655 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
NDUFA9-202ENST00000396655 DIP2AQ14689 1571 aa16.5■□□□□ 0.23
NDUFA9-202ENST00000396655 KIF1BO60333 1816 aa16.49■□□□□ 0.23
NDUFA9-202ENST00000396655 RPGRIP1LQ68CZ1 1315 aa16.49■□□□□ 0.23
NDUFA9-202ENST00000396655 CLTCL1P53675 1640 aa16.49■□□□□ 0.23
NDUFA9-202ENST00000396655 ZNF326Q5BKZ1 582 aaKnown RBP16.49■□□□□ 0.23
NDUFA9-202ENST00000396655 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
NDUFA9-202ENST00000396655 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
NDUFA9-202ENST00000396655 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
NDUFA9-202ENST00000396655 CHD2O14647 1828 aaKnown RBP16.47■□□□□ 0.23
NDUFA9-202ENST00000396655 VGFO15240 615 aaPredicted RBP16.46■□□□□ 0.23
NDUFA9-202ENST00000396655 PROSER2Q86WR7 435 aaPredicted RBP16.46■□□□□ 0.23
NDUFA9-202ENST00000396655 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
NDUFA9-202ENST00000396655 RAB3GAP2Q9H2M9 1393 aa16.45■□□□□ 0.22
NDUFA9-202ENST00000396655 SETBP1Q9Y6X0 1596 aa16.45■□□□□ 0.22
NDUFA9-202ENST00000396655 TMEM94Q12767 1356 aa16.44■□□□□ 0.22
NDUFA9-202ENST00000396655 NUTM2DQ5VT03 806 aaPredicted RBP16.44■□□□□ 0.22
NDUFA9-202ENST00000396655 NEXMIFQ5QGS0 1516 aa16.44■□□□□ 0.22
NDUFA9-202ENST00000396655 CCDC144AA2RUR9 1427 aa16.44■□□□□ 0.22
NDUFA9-202ENST00000396655 XIRP1Q702N8 1843 aaKnown RBP16.43■□□□□ 0.22
NDUFA9-202ENST00000396655 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
NDUFA9-202ENST00000396655 NRXN3Q9Y4C0 1643 aa16.39■□□□□ 0.21
NDUFA9-202ENST00000396655 MAPK8IP2Q13387 824 aaPredicted RBP16.39■□□□□ 0.21
NDUFA9-202ENST00000396655 AMOTL2Q9Y2J4 779 aa16.39■□□□□ 0.21
NDUFA9-202ENST00000396655 SPATA31E1Q6ZUB1 1445 aa16.38■□□□□ 0.21
NDUFA9-202ENST00000396655 MSH6P52701 1360 aa16.38■□□□□ 0.21
NDUFA9-202ENST00000396655 ANKRD30BQ9BXX2 1392 aa16.38■□□□□ 0.21
NDUFA9-202ENST00000396655 FAM135BQ49AJ0 1406 aa16.37■□□□□ 0.21
NDUFA9-202ENST00000396655 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
NDUFA9-202ENST00000396655 PPLO60437 1756 aa16.36■□□□□ 0.21
NDUFA9-202ENST00000396655 KCNA4P22459 653 aa16.35■□□□□ 0.21
NDUFA9-202ENST00000396655 PTPRUQ92729 1446 aa16.35■□□□□ 0.21
NDUFA9-202ENST00000396655 METP08581 1390 aa16.34■□□□□ 0.21
NDUFA9-202ENST00000396655 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
NDUFA9-202ENST00000396655 XRN1Q8IZH2 1706 aaKnown RBP16.33■□□□□ 0.2
NDUFA9-202ENST00000396655 RGL3Q3MIN7 710 aa16.32■□□□□ 0.2
NDUFA9-202ENST00000396655 CADPS2Q86UW7 1296 aa16.32■□□□□ 0.2
NDUFA9-202ENST00000396655 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
NDUFA9-202ENST00000396655 RBM33Q96EV2 1170 aaKnown RBP16.32■□□□□ 0.2
NDUFA9-202ENST00000396655 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
NDUFA9-202ENST00000396655 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
NDUFA9-202ENST00000396655 DCCP43146 1447 aa16.3■□□□□ 0.2
NDUFA9-202ENST00000396655 IFT172Q9UG01 1749 aa16.29■□□□□ 0.2
NDUFA9-202ENST00000396655 ATF3P18847 181 aa16.29■□□□□ 0.2
NDUFA9-202ENST00000396655 C14orf37Q86TY3 774 aa16.29■□□□□ 0.2
NDUFA9-202ENST00000396655 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
NDUFA9-202ENST00000396655 ADGRF5Q8IZF2 1346 aa16.28■□□□□ 0.2
NDUFA9-202ENST00000396655 PTCH1Q13635 1447 aa16.28■□□□□ 0.2
NDUFA9-202ENST00000396655 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.26■□□□□ 0.19
NDUFA9-202ENST00000396655 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
NDUFA9-202ENST00000396655 PIK3C2GO75747 1445 aa16.26■□□□□ 0.19
NDUFA9-202ENST00000396655 NRXN1Q9ULB1 1477 aa16.25■□□□□ 0.19
NDUFA9-202ENST00000396655 MYOM2P54296 1465 aa16.24■□□□□ 0.19
NDUFA9-202ENST00000396655 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
NDUFA9-202ENST00000396655 ADGRL3Q9HAR2 1447 aa16.23■□□□□ 0.19
NDUFA9-202ENST00000396655 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
NDUFA9-202ENST00000396655 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
NDUFA9-202ENST00000396655 TECPR2O15040 1411 aa16.22■□□□□ 0.19
NDUFA9-202ENST00000396655 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
NDUFA9-202ENST00000396655 ROBO2Q9HCK4 1378 aa16.22■□□□□ 0.19
NDUFA9-202ENST00000396655 LRPPRCP42704 1394 aaKnown RBP16.21■□□□□ 0.19
NDUFA9-202ENST00000396655 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
NDUFA9-202ENST00000396655 LAMC1P11047 1609 aa16.19■□□□□ 0.18
NDUFA9-202ENST00000396655 CNKSR2Q8WXI2 1034 aa16.18■□□□□ 0.18
NDUFA9-202ENST00000396655 DHX57Q6P158 1386 aaKnown RBP16.17■□□□□ 0.18
NDUFA9-202ENST00000396655 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
NDUFA9-202ENST00000396655 MST1RQ04912 1400 aa16.17■□□□□ 0.18
NDUFA9-202ENST00000396655 TMEM132EQ6IEE7 984 aa16.16■□□□□ 0.18
NDUFA9-202ENST00000396655 BRINP3Q76B58 766 aa16.16■□□□□ 0.18
NDUFA9-202ENST00000396655 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
NDUFA9-202ENST00000396655 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
NDUFA9-202ENST00000396655 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms