RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 MSH6P52701 1360 aa27.09■■□□□ 1.93
EXOSC3-202ENST00000396521 XIRP1Q702N8 1843 aaKnown RBP27.09■■□□□ 1.93
EXOSC3-202ENST00000396521 RGS17Q9UGC6 210 aaPredicted RBP27.09■■□□□ 1.93
EXOSC3-202ENST00000396521 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.08■■□□□ 1.93
EXOSC3-202ENST00000396521 PLEKHG1Q9ULL1 1385 aa27.08■■□□□ 1.93
EXOSC3-202ENST00000396521 PPP1R15AO75807 674 aaPredicted RBP27.06■■□□□ 1.92
EXOSC3-202ENST00000396521 SLAIN2Q9P270 581 aa27.06■■□□□ 1.92
EXOSC3-202ENST00000396521 TBX22Q9Y458 520 aa27.05■■□□□ 1.92
EXOSC3-202ENST00000396521 NWD1Q149M9 1564 aa27.05■■□□□ 1.92
EXOSC3-202ENST00000396521 ZFYVE9O95405 1425 aa27.04■■□□□ 1.92
EXOSC3-202ENST00000396521 NCOA3Q9Y6Q9 1424 aa27.04■■□□□ 1.92
EXOSC3-202ENST00000396521 RIMS2Q9UQ26 1411 aa27.01■■□□□ 1.91
EXOSC3-202ENST00000396521 RBM33Q96EV2 1170 aaKnown RBP27■■□□□ 1.91
EXOSC3-202ENST00000396521 ROBO1Q9Y6N7 1651 aa26.98■■□□□ 1.91
EXOSC3-202ENST00000396521 JCADQ9P266 1359 aa26.97■■□□□ 1.91
EXOSC3-202ENST00000396521 ROCK1Q13464 1354 aa26.96■■□□□ 1.91
EXOSC3-202ENST00000396521 PIK3R4Q99570 1358 aa26.96■■□□□ 1.91
EXOSC3-202ENST00000396521 CHGAP10645 457 aaKnown RBP26.93■■□□□ 1.9
EXOSC3-202ENST00000396521 POTEAQ6S8J7 498 aa26.93■■□□□ 1.9
EXOSC3-202ENST00000396521 CADPS2Q86UW7 1296 aa26.93■■□□□ 1.9
EXOSC3-202ENST00000396521 TMEM131LA2VDJ0 1609 aa26.92■■□□□ 1.9
EXOSC3-202ENST00000396521 C19orf44Q9H6X5 657 aa26.92■■□□□ 1.9
EXOSC3-202ENST00000396521 C14orf37Q86TY3 774 aa26.91■■□□□ 1.9
EXOSC3-202ENST00000396521 UNC13BO14795 1591 aa26.88■■□□□ 1.89
EXOSC3-202ENST00000396521 CHD2O14647 1828 aaKnown RBP26.88■■□□□ 1.89
EXOSC3-202ENST00000396521 ATF3P18847 181 aa26.88■■□□□ 1.89
EXOSC3-202ENST00000396521 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
EXOSC3-202ENST00000396521 DIP2AQ14689 1571 aa26.87■■□□□ 1.89
EXOSC3-202ENST00000396521 SPATA31A6Q5VVP1 1343 aa26.87■■□□□ 1.89
EXOSC3-202ENST00000396521 ADAMTS13Q76LX8 1427 aa26.85■■□□□ 1.89
EXOSC3-202ENST00000396521 NUP155O75694 1391 aa26.84■■□□□ 1.89
EXOSC3-202ENST00000396521 PHLPP1O60346 1717 aa26.81■■□□□ 1.88
EXOSC3-202ENST00000396521 AMOTL2Q9Y2J4 779 aa26.8■■□□□ 1.88
EXOSC3-202ENST00000396521 ZNF772Q68DY9 489 aaPredicted RBP26.79■■□□□ 1.88
EXOSC3-202ENST00000396521 IQGAP3Q86VI3 1631 aa26.79■■□□□ 1.88
EXOSC3-202ENST00000396521 NUTM2DQ5VT03 806 aaPredicted RBP26.78■■□□□ 1.88
EXOSC3-202ENST00000396521 MYO5BQ9ULV0 1848 aa26.77■■□□□ 1.88
EXOSC3-202ENST00000396521 E9PCH4 1651 aa26.77■■□□□ 1.88
EXOSC3-202ENST00000396521 TRPM2O94759 1503 aa26.77■■□□□ 1.88
EXOSC3-202ENST00000396521 DCCP43146 1447 aa26.75■■□□□ 1.87
EXOSC3-202ENST00000396521 MEX3CQ5U5Q3 659 aaKnown RBP26.75■■□□□ 1.87
EXOSC3-202ENST00000396521 COL16A1Q07092 1604 aaPredicted RBP26.75■■□□□ 1.87
EXOSC3-202ENST00000396521 AHDC1Q5TGY3 1603 aaPredicted RBP26.72■■□□□ 1.87
EXOSC3-202ENST00000396521 BRINP3Q76B58 766 aa26.71■■□□□ 1.87
EXOSC3-202ENST00000396521 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.86
EXOSC3-202ENST00000396521 ITGAEP38570 1179 aa26.68■■□□□ 1.86
EXOSC3-202ENST00000396521 PTPRUQ92729 1446 aa26.67■■□□□ 1.86
EXOSC3-202ENST00000396521 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
EXOSC3-202ENST00000396521 SETBP1Q9Y6X0 1596 aa26.65■■□□□ 1.86
EXOSC3-202ENST00000396521 LRP6O75581 1613 aa26.65■■□□□ 1.86
EXOSC3-202ENST00000396521 LRRC59Q96AG4 307 aaKnown RBP26.63■■□□□ 1.85
EXOSC3-202ENST00000396521 SHPRHQ149N8 1683 aa26.62■■□□□ 1.85
EXOSC3-202ENST00000396521 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
EXOSC3-202ENST00000396521 RXRBP28702 533 aa26.61■■□□□ 1.85
EXOSC3-202ENST00000396521 METP08581 1390 aa26.58■■□□□ 1.84
EXOSC3-202ENST00000396521 MST1RQ04912 1400 aa26.57■■□□□ 1.84
EXOSC3-202ENST00000396521 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
EXOSC3-202ENST00000396521 XRN1Q8IZH2 1706 aaKnown RBP26.56■■□□□ 1.84
EXOSC3-202ENST00000396521 ADGRL3Q9HAR2 1447 aa26.56■■□□□ 1.84
EXOSC3-202ENST00000396521 CDK12Q9NYV4 1490 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 NUTM2BA6NNL0 878 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 NUTM2EB1AL46 878 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 VGFO15240 615 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 NUTM2AQ8IVF1 878 aaPredicted RBP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 UPF1Q92900 1129 aaKnown RBP eCLIP26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 TRIM52Q96A61 297 aa26.55■■□□□ 1.84
EXOSC3-202ENST00000396521 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
EXOSC3-202ENST00000396521 SPHKAPQ2M3C7 1700 aa26.53■■□□□ 1.84
EXOSC3-202ENST00000396521 AFF2P51816 1311 aa26.5■■□□□ 1.83
EXOSC3-202ENST00000396521 RPGRIP1LQ68CZ1 1315 aa26.49■■□□□ 1.83
EXOSC3-202ENST00000396521 NEXMIFQ5QGS0 1516 aa26.47■■□□□ 1.83
EXOSC3-202ENST00000396521 SETD1AO15047 1707 aaKnown RBP26.47■■□□□ 1.83
EXOSC3-202ENST00000396521 PTCH1Q13635 1447 aa26.46■■□□□ 1.83
EXOSC3-202ENST00000396521 RBM6P78332 1123 aaKnown RBP26.45■■□□□ 1.82
EXOSC3-202ENST00000396521 NHSL1Q5SYE7 1610 aa26.45■■□□□ 1.82
EXOSC3-202ENST00000396521 PNPLA6Q8IY17 1366 aa26.45■■□□□ 1.82
EXOSC3-202ENST00000396521 NAIPQ13075 1403 aa26.44■■□□□ 1.82
EXOSC3-202ENST00000396521 RRBP1Q9P2E9 1410 aaKnown RBP26.44■■□□□ 1.82
EXOSC3-202ENST00000396521 PPARGC1BQ86YN6 1023 aaKnown RBP26.43■■□□□ 1.82
EXOSC3-202ENST00000396521 QTRT2Q9H974 415 aaKnown RBP26.43■■□□□ 1.82
EXOSC3-202ENST00000396521 PRAG1Q86YV5 1406 aa26.42■■□□□ 1.82
EXOSC3-202ENST00000396521 C8orf37Q96NL8 207 aa26.42■■□□□ 1.82
EXOSC3-202ENST00000396521 CLTCL1P53675 1640 aa26.42■■□□□ 1.82
EXOSC3-202ENST00000396521 C1orf167Q5SNV9 1468 aa26.42■■□□□ 1.82
EXOSC3-202ENST00000396521 NGLY1Q96IV0 654 aa26.4■■□□□ 1.82
EXOSC3-202ENST00000396521 SOS2Q07890 1332 aaPredicted RBP26.39■■□□□ 1.82
EXOSC3-202ENST00000396521 DDX17Q92841 729 aaKnown RBP26.38■■□□□ 1.81
EXOSC3-202ENST00000396521 HFM1A2PYH4 1435 aa26.38■■□□□ 1.81
EXOSC3-202ENST00000396521 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
EXOSC3-202ENST00000396521 ROBO2Q9HCK4 1378 aa26.36■■□□□ 1.81
EXOSC3-202ENST00000396521 KIF1BO60333 1816 aa26.36■■□□□ 1.81
EXOSC3-202ENST00000396521 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
EXOSC3-202ENST00000396521 LAMC1P11047 1609 aa26.33■■□□□ 1.81
EXOSC3-202ENST00000396521 ADAMTS2O95450 1211 aa26.33■■□□□ 1.81
EXOSC3-202ENST00000396521 ORAI2Q96SN7 254 aa26.33■■□□□ 1.81
EXOSC3-202ENST00000396521 FNBP4Q8N3X1 1017 aaPredicted RBP26.3■■□□□ 1.8
EXOSC3-202ENST00000396521 TRPC5Q9UL62 973 aaPredicted RBP26.3■■□□□ 1.8
EXOSC3-202ENST00000396521 NPHP3Q7Z494 1330 aa26.3■■□□□ 1.8
EXOSC3-202ENST00000396521 USP21Q9UK80 565 aa26.29■■□□□ 1.8
EXOSC3-202ENST00000396521 RGS12O14924 1447 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 176.7 ms