RNA–Protein interactions for RNA: ENST00000396401.7

TCEA1-201, Transcript of transcription elongation factor A1, humanhuman

TSL 1 (best) BASIC

Gene TCEA1, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-201ENST00000396401 FAM161AQ3B820 660 aa23.12■■□□□ 1.29
TCEA1-201ENST00000396401 USP35Q9P2H5 1018 aa23.11■■□□□ 1.29
TCEA1-201ENST00000396401 IGHDP01880 384 aa23.11■■□□□ 1.29
TCEA1-201ENST00000396401 ZNF521Q96K83 1311 aa23.11■■□□□ 1.29
TCEA1-201ENST00000396401 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
TCEA1-201ENST00000396401 PREX2Q70Z35 1606 aa23.1■■□□□ 1.29
TCEA1-201ENST00000396401 GSE1Q14687 1217 aa23.1■■□□□ 1.29
TCEA1-201ENST00000396401 AFAP1Q8N556 730 aa23.09■■□□□ 1.29
TCEA1-201ENST00000396401 RRP7AQ9Y3A4 280 aaKnown RBP23.09■■□□□ 1.29
TCEA1-201ENST00000396401 PANK1Q8TE04 598 aa23.08■■□□□ 1.28
TCEA1-201ENST00000396401 SEC24BO95487 1268 aa23.07■■□□□ 1.28
TCEA1-201ENST00000396401 RSPH4AQ5TD94 716 aa23.07■■□□□ 1.28
TCEA1-201ENST00000396401 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
TCEA1-201ENST00000396401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.06■■□□□ 1.284e-8■■■■■ 52.5
TCEA1-201ENST00000396401 COG6Q9Y2V7 657 aa23.05■■□□□ 1.28
TCEA1-201ENST00000396401 BCL2L13Q9BXK5 485 aa23.04■■□□□ 1.28
TCEA1-201ENST00000396401 TNNQ9UQP3 1299 aa23.04■■□□□ 1.28
TCEA1-201ENST00000396401 CFAP70Q5T0N1 1121 aa23.04■■□□□ 1.28
TCEA1-201ENST00000396401 UNC13BO14795 1591 aa23.04■■□□□ 1.28
TCEA1-201ENST00000396401 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.02■■□□□ 1.28
TCEA1-201ENST00000396401 CARD14Q9BXL6 1004 aa23.02■■□□□ 1.27
TCEA1-201ENST00000396401 CANXP27824 592 aaKnown RBP23.01■■□□□ 1.27
TCEA1-201ENST00000396401 TRAPPC8Q9Y2L5 1435 aa23■■□□□ 1.27
TCEA1-201ENST00000396401 SLKQ9H2G2 1235 aaPredicted RBP23■■□□□ 1.27
TCEA1-201ENST00000396401 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
TCEA1-201ENST00000396401 IQGAP3Q86VI3 1631 aa22.99■■□□□ 1.27
TCEA1-201ENST00000396401 ARXQ96QS3 562 aa22.98■■□□□ 1.27
TCEA1-201ENST00000396401 EIF2AK4Q9P2K8 1649 aaKnown RBP22.97■■□□□ 1.27
TCEA1-201ENST00000396401 CLUAP1Q96AJ1 413 aa22.96■■□□□ 1.27
TCEA1-201ENST00000396401 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
TCEA1-201ENST00000396401 LAMC1P11047 1609 aa22.94■■□□□ 1.26
TCEA1-201ENST00000396401 TRMT2AQ8IZ69 625 aaKnown RBP22.94■■□□□ 1.26
TCEA1-201ENST00000396401 MAST1Q9Y2H9 1570 aa22.94■■□□□ 1.26
TCEA1-201ENST00000396401 SPRYD3Q8NCJ5 442 aa22.94■■□□□ 1.26
TCEA1-201ENST00000396401 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
TCEA1-201ENST00000396401 NKTRP30414 1462 aaKnown RBP22.93■■□□□ 1.26
TCEA1-201ENST00000396401 USP19O94966 1318 aa22.93■■□□□ 1.26
TCEA1-201ENST00000396401 MADDQ8WXG6 1647 aa22.93■■□□□ 1.26
TCEA1-201ENST00000396401 INSRP06213 1382 aa22.93■■□□□ 1.26
TCEA1-201ENST00000396401 RNF17Q9BXT8 1623 aaKnown RBP22.92■■□□□ 1.26
TCEA1-201ENST00000396401 CHGAP10645 457 aaKnown RBP22.92■■□□□ 1.26
TCEA1-201ENST00000396401 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
TCEA1-201ENST00000396401 SPAG9O60271 1321 aaKnown RBP22.91■■□□□ 1.26
TCEA1-201ENST00000396401 SCAF11Q99590 1463 aaKnown RBP22.91■■□□□ 1.26
TCEA1-201ENST00000396401 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
TCEA1-201ENST00000396401 RLBP1P12271 317 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 EFCAB2Q5VUJ9 269 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 CENPJQ9HC77 1338 aaPredicted RBP22.9■■□□□ 1.26
TCEA1-201ENST00000396401 KIF3BO15066 747 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 CDCA8Q53HL2 280 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 POGKQ9P215 609 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 ATP10AO60312 1499 aa22.9■■□□□ 1.26
TCEA1-201ENST00000396401 E9PSI1 815 aa22.89■■□□□ 1.26
TCEA1-201ENST00000396401 WWC1Q8IX03 1113 aa22.89■■□□□ 1.26
TCEA1-201ENST00000396401 IQGAP1P46940 1657 aa22.87■■□□□ 1.25
TCEA1-201ENST00000396401 PIK3C2GO75747 1445 aa22.87■■□□□ 1.25
TCEA1-201ENST00000396401 MYOM1P52179 1685 aa22.87■■□□□ 1.25
TCEA1-201ENST00000396401 SLC12A5Q9H2X9 1139 aa22.87■■□□□ 1.25
TCEA1-201ENST00000396401 TRAK1Q9UPV9 953 aa22.87■■□□□ 1.25
TCEA1-201ENST00000396401 PLXNC1O60486 1568 aa22.86■■□□□ 1.25
TCEA1-201ENST00000396401 NUTM2DQ5VT03 806 aaPredicted RBP22.86■■□□□ 1.25
TCEA1-201ENST00000396401 PCDHB15Q9Y5E8 787 aa22.86■■□□□ 1.25
TCEA1-201ENST00000396401 EIF3AQ14152 1382 aaKnown RBP22.85■■□□□ 1.25
TCEA1-201ENST00000396401 CLTCL1P53675 1640 aa22.85■■□□□ 1.25
TCEA1-201ENST00000396401 SYNMO15061 1565 aa22.84■■□□□ 1.25
TCEA1-201ENST00000396401 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
TCEA1-201ENST00000396401 EIF5BO60841 1220 aaKnown RBP22.82■■□□□ 1.24
TCEA1-201ENST00000396401 TCP11L2Q8N4U5 519 aa22.81■■□□□ 1.24
TCEA1-201ENST00000396401 MORC1Q86VD1 984 aa22.81■■□□□ 1.24
TCEA1-201ENST00000396401 ERVK-7P63135 1459 aa22.8■■□□□ 1.24
TCEA1-201ENST00000396401 PLCH2O75038 1416 aa22.8■■□□□ 1.24
TCEA1-201ENST00000396401 RARSP54136 660 aaKnown RBP22.78■■□□□ 1.24
TCEA1-201ENST00000396401 CGNL1Q0VF96 1302 aa22.78■■□□□ 1.24
TCEA1-201ENST00000396401 CHD1O14646 1710 aa22.77■■□□□ 1.24
TCEA1-201ENST00000396401 SAFB2Q14151 953 aaKnown RBP eCLIP22.77■■□□□ 1.24
TCEA1-201ENST00000396401 SPHKAPQ2M3C7 1700 aa22.77■■□□□ 1.24
TCEA1-201ENST00000396401 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
TCEA1-201ENST00000396401 PDZRN3Q9UPQ7 1066 aa22.76■■□□□ 1.23
TCEA1-201ENST00000396401 MTHFSP49914 203 aa22.75■■□□□ 1.23
TCEA1-201ENST00000396401 NSD3Q9BZ95 1437 aa22.75■■□□□ 1.23
TCEA1-201ENST00000396401 PDE3AQ14432 1141 aa22.75■■□□□ 1.23
TCEA1-201ENST00000396401 TRPM2O94759 1503 aa22.75■■□□□ 1.23
TCEA1-201ENST00000396401 ABCC2Q92887 1545 aa22.75■■□□□ 1.23
TCEA1-201ENST00000396401 TSR2Q969E8 191 aaKnown RBP22.74■■□□□ 1.23
TCEA1-201ENST00000396401 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
TCEA1-201ENST00000396401 CLASP1Q7Z460 1538 aa22.74■■□□□ 1.23
TCEA1-201ENST00000396401 CEP152O94986 1710 aa22.73■■□□□ 1.23
TCEA1-201ENST00000396401 GZF1Q9H116 711 aaPredicted RBP22.73■■□□□ 1.23
TCEA1-201ENST00000396401 ABCC1P33527 1531 aa22.73■■□□□ 1.23
TCEA1-201ENST00000396401 SCAPERQ9BY12 1400 aa22.73■■□□□ 1.23
TCEA1-201ENST00000396401 PTPRTO14522 1441 aa22.69■■□□□ 1.22
TCEA1-201ENST00000396401 TBC1D2Q9BYX2 928 aa22.69■■□□□ 1.22
TCEA1-201ENST00000396401 NPC1L1Q9UHC9 1359 aa22.69■■□□□ 1.22
TCEA1-201ENST00000396401 U2AF1L5P0DN76 240 aaPredicted RBP22.68■■□□□ 1.22
TCEA1-201ENST00000396401 U2AF1Q01081 240 aaKnown RBP eCLIP22.68■■□□□ 1.224e-7■■■■□ 24.2
TCEA1-201ENST00000396401 RUNDC1Q96C34 613 aa22.68■■□□□ 1.22
TCEA1-201ENST00000396401 MAPK8IP3Q9UPT6 1336 aa22.68■■□□□ 1.22
TCEA1-201ENST00000396401 NLRP1Q9C000 1473 aa22.68■■□□□ 1.22
TCEA1-201ENST00000396401 ABCA6Q8N139 1617 aa22.67■■□□□ 1.22
TCEA1-201ENST00000396401 MFAP1P55081 439 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms