RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
GREB1-206ENST00000396123 PHF14O94880 888 aa16.13■□□□□ 0.17
GREB1-206ENST00000396123 NBPF8Q3BBV2 869 aa16.13■□□□□ 0.17
GREB1-206ENST00000396123 SKOR2Q2VWA4 1001 aaPredicted RBP16.12■□□□□ 0.17
GREB1-206ENST00000396123 DDX49Q9Y6V7 483 aaKnown RBP16.12■□□□□ 0.17
GREB1-206ENST00000396123 TEFQ10587 303 aa16.12■□□□□ 0.17
GREB1-206ENST00000396123 FOXD4L5Q5VV16 416 aaPredicted RBP16.12■□□□□ 0.17
GREB1-206ENST00000396123 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
GREB1-206ENST00000396123 FOXD4L4Q8WXT5 416 aaPredicted RBP16.12■□□□□ 0.17
GREB1-206ENST00000396123 KIAA1107Q9UPP5 1409 aa16.12■□□□□ 0.17
GREB1-206ENST00000396123 REC8O95072 547 aa16.11■□□□□ 0.17
GREB1-206ENST00000396123 AFAP1Q8N556 730 aa16.11■□□□□ 0.17
GREB1-206ENST00000396123 GNAI1P63096 354 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 C1orf141Q5JVX7 400 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 SYNJ2O15056 1496 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 CDCA7LQ96GN5 454 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 TPM4P67936 248 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 TMX4Q9H1E5 349 aaPredicted RBP16.1■□□□□ 0.17
GREB1-206ENST00000396123 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 CFAP70Q5T0N1 1121 aa16.1■□□□□ 0.17
GREB1-206ENST00000396123 PPP2R1AP30153 589 aa16.09■□□□□ 0.17
GREB1-206ENST00000396123 NBPF1Q3BBV0 1214 aa16.09■□□□□ 0.17
GREB1-206ENST00000396123 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
GREB1-206ENST00000396123 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
GREB1-206ENST00000396123 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.09■□□□□ 0.17
GREB1-206ENST00000396123 ROCK1Q13464 1354 aa16.09■□□□□ 0.17
GREB1-206ENST00000396123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.08■□□□□ 0.17
GREB1-206ENST00000396123 CCDC34Q96HJ3 373 aa16.08■□□□□ 0.17
GREB1-206ENST00000396123 TOPBP1Q92547 1522 aa16.08■□□□□ 0.16
GREB1-206ENST00000396123 HMGXB3Q12766 1538 aa16.08■□□□□ 0.16
GREB1-206ENST00000396123 MTHFSP49914 203 aa16.08■□□□□ 0.16
GREB1-206ENST00000396123 CHMP5Q9NZZ3 219 aa16.08■□□□□ 0.16
GREB1-206ENST00000396123 CABP2Q9NPB3 220 aa16.08■□□□□ 0.16
GREB1-206ENST00000396123 C9orf84Q5VXU9 1444 aa16.07■□□□□ 0.16
GREB1-206ENST00000396123 ATP6V1DQ9Y5K8 247 aa16.07■□□□□ 0.16
GREB1-206ENST00000396123 POLA1P09884 1462 aaPredicted RBP16.07■□□□□ 0.16
GREB1-206ENST00000396123 NESP48681 1621 aa16.07■□□□□ 0.16
GREB1-206ENST00000396123 TCP11L2Q8N4U5 519 aa16.07■□□□□ 0.16
GREB1-206ENST00000396123 TROQ12816 1431 aaPredicted RBP16.06■□□□□ 0.16
GREB1-206ENST00000396123 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
GREB1-206ENST00000396123 HMOX1P09601 288 aa16.06■□□□□ 0.16
GREB1-206ENST00000396123 DIAPH3Q9NSV4 1193 aa16.06■□□□□ 0.16
GREB1-206ENST00000396123 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.05■□□□□ 0.16
GREB1-206ENST00000396123 LNPKQ9C0E8 428 aa16.05■□□□□ 0.16
GREB1-206ENST00000396123 PNISRQ8TF01 805 aaKnown RBP16.05■□□□□ 0.16
GREB1-206ENST00000396123 C9orf78Q9NZ63 289 aaPredicted RBP16.05■□□□□ 0.16
GREB1-206ENST00000396123 PRG4Q92954 1404 aaPredicted RBP16.05■□□□□ 0.16
GREB1-206ENST00000396123 NEXNQ0ZGT2 675 aa16.04■□□□□ 0.16
GREB1-206ENST00000396123 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
GREB1-206ENST00000396123 FKBP5Q13451 457 aaPredicted RBP16.04■□□□□ 0.16
GREB1-206ENST00000396123 C22orf23Q9BZE7 217 aa16.03■□□□□ 0.16
GREB1-206ENST00000396123 WDR97A6NE52 1622 aa16.03■□□□□ 0.16
GREB1-206ENST00000396123 SF3A1Q15459 793 aaKnown RBP16.03■□□□□ 0.16
GREB1-206ENST00000396123 NECTIN2Q92692 538 aa16.02■□□□□ 0.16
GREB1-206ENST00000396123 HECW1Q76N89 1606 aa16.02■□□□□ 0.16
GREB1-206ENST00000396123 DAPK1P53355 1430 aa16.02■□□□□ 0.16
GREB1-206ENST00000396123 CHMP4CQ96CF2 233 aa16.02■□□□□ 0.16
GREB1-206ENST00000396123 H3BQV1 296 aa16.02■□□□□ 0.15
GREB1-206ENST00000396123 IFFO2Q5TF58 517 aa16.02■□□□□ 0.15
GREB1-206ENST00000396123 INTS3Q68E01 1043 aaKnown RBP16.01■□□□□ 0.15
GREB1-206ENST00000396123 TSPYL4Q9UJ04 414 aa16.01■□□□□ 0.15
GREB1-206ENST00000396123 FOXD4L6Q3SYB3 417 aaPredicted RBP16.01■□□□□ 0.15
GREB1-206ENST00000396123 FOXD4L3Q6VB84 417 aaPredicted RBP16.01■□□□□ 0.15
GREB1-206ENST00000396123 IFT140Q96RY7 1462 aa16.01■□□□□ 0.15
GREB1-206ENST00000396123 ZKSCAN1P17029 563 aaPredicted RBP16.01■□□□□ 0.15
GREB1-206ENST00000396123 FAM184AQ8NB25 1140 aa16.01■□□□□ 0.15
GREB1-206ENST00000396123 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
GREB1-206ENST00000396123 MRC2Q9UBG0 1479 aa16.01■□□□□ 0.15
GREB1-206ENST00000396123 NAIPQ13075 1403 aa16■□□□□ 0.15
GREB1-206ENST00000396123 CLSTN1O94985 981 aa16■□□□□ 0.15
GREB1-206ENST00000396123 FAM69CQ0P6D2 419 aa16■□□□□ 0.15
GREB1-206ENST00000396123 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
GREB1-206ENST00000396123 PLEKHH2Q8IVE3 1493 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 PDE3AQ14432 1141 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 ANO2Q9NQ90 1003 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 AKNAQ7Z591 1439 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 SCAPERQ9BY12 1400 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 IFIT2P09913 472 aaKnown RBP15.99■□□□□ 0.15
GREB1-206ENST00000396123 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
GREB1-206ENST00000396123 ARID3AQ99856 593 aa15.99■□□□□ 0.15
GREB1-206ENST00000396123 DDX58O95786 925 aaKnown RBP15.98■□□□□ 0.15
GREB1-206ENST00000396123 NFKBIBQ15653 356 aa15.98■□□□□ 0.15
GREB1-206ENST00000396123 CCDC184Q52MB2 194 aa15.98■□□□□ 0.15
GREB1-206ENST00000396123 PSME1Q06323 249 aa15.98■□□□□ 0.15
GREB1-206ENST00000396123 GTF2E1P29083 439 aaPredicted RBP15.97■□□□□ 0.15
GREB1-206ENST00000396123 NUCB2P80303 420 aa15.97■□□□□ 0.15
GREB1-206ENST00000396123 LRRFIP1Q32MZ4 808 aaKnown RBP15.97■□□□□ 0.15
GREB1-206ENST00000396123 SMG6Q86US8 1419 aaKnown RBP15.97■□□□□ 0.15
GREB1-206ENST00000396123 DNMBPQ6XZF7 1577 aa15.96■□□□□ 0.15
GREB1-206ENST00000396123 SLC12A5Q9H2X9 1139 aa15.96■□□□□ 0.15
GREB1-206ENST00000396123 FRAT2O75474 233 aaPredicted RBP15.96■□□□□ 0.15
GREB1-206ENST00000396123 HSP90AB4PQ58FF6 505 aa15.96■□□□□ 0.15
GREB1-206ENST00000396123 EXOSC9Q06265 439 aaKnown RBP15.96■□□□□ 0.15
GREB1-206ENST00000396123 RSPH6AQ9H0K4 717 aa15.96■□□□□ 0.15
GREB1-206ENST00000396123 CDC45O75419 566 aa15.95■□□□□ 0.14
GREB1-206ENST00000396123 G3BP1Q13283 466 aaKnown RBP eCLIP15.95■□□□□ 0.142e-8■■□□□ 12.5
GREB1-206ENST00000396123 RASSF8Q8NHQ8 419 aa15.95■□□□□ 0.14
GREB1-206ENST00000396123 G3V3G9 751 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms