RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 SCAF11Q99590 1463 aaKnown RBP14.77□□□□□ -0.04
THUMPD1-202ENST00000396083 POLR1AO95602 1720 aaPredicted RBP14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 NEURL4Q96JN8 1562 aa14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 NPHP4O75161 1426 aaPredicted RBP14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 KIF1BO60333 1816 aa14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 KDM2AQ9Y2K7 1162 aa14.76□□□□□ -0.05
THUMPD1-202ENST00000396083 ANKRD30BQ9BXX2 1392 aa14.74□□□□□ -0.05
THUMPD1-202ENST00000396083 SLIT1O75093 1534 aa14.73□□□□□ -0.05
THUMPD1-202ENST00000396083 ARHGAP23Q9P227 1491 aa14.73□□□□□ -0.05
THUMPD1-202ENST00000396083 DHX57Q6P158 1386 aaKnown RBP14.72□□□□□ -0.05
THUMPD1-202ENST00000396083 ACIN1Q9UKV3 1341 aaKnown RBP14.72□□□□□ -0.05
THUMPD1-202ENST00000396083 ZFYVE9O95405 1425 aa14.72□□□□□ -0.05
THUMPD1-202ENST00000396083 HDGFP51858 240 aaKnown RBP14.71□□□□□ -0.05
THUMPD1-202ENST00000396083 IQGAP1P46940 1657 aa14.71□□□□□ -0.05
THUMPD1-202ENST00000396083 DCAF11Q8TEB1 546 aa14.7□□□□□ -0.06
THUMPD1-202ENST00000396083 ADGRF5Q8IZF2 1346 aa14.69□□□□□ -0.06
THUMPD1-202ENST00000396083 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.69□□□□□ -0.06
THUMPD1-202ENST00000396083 KDM5AP29375 1690 aaKnown RBP14.68□□□□□ -0.06
THUMPD1-202ENST00000396083 SPATA31E1Q6ZUB1 1445 aa14.67□□□□□ -0.06
THUMPD1-202ENST00000396083 MED14O60244 1454 aa14.67□□□□□ -0.06
THUMPD1-202ENST00000396083 VGFO15240 615 aaPredicted RBP14.67□□□□□ -0.06
THUMPD1-202ENST00000396083 NEXMIFQ5QGS0 1516 aa14.67□□□□□ -0.06
THUMPD1-202ENST00000396083 PLEKHG1Q9ULL1 1385 aa14.66□□□□□ -0.06
THUMPD1-202ENST00000396083 TMEM132EQ6IEE7 984 aa14.65□□□□□ -0.06
THUMPD1-202ENST00000396083 CCER1Q8TC90 406 aaPredicted RBP14.64□□□□□ -0.07
THUMPD1-202ENST00000396083 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
THUMPD1-202ENST00000396083 STK26Q9P289 416 aa14.63□□□□□ -0.07
THUMPD1-202ENST00000396083 KCNA6P17658 529 aa14.63□□□□□ -0.07
THUMPD1-202ENST00000396083 ADAMTS13Q76LX8 1427 aa14.63□□□□□ -0.07
THUMPD1-202ENST00000396083 METP08581 1390 aa14.62□□□□□ -0.07
THUMPD1-202ENST00000396083 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
THUMPD1-202ENST00000396083 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
THUMPD1-202ENST00000396083 PPLO60437 1756 aa14.62□□□□□ -0.07
THUMPD1-202ENST00000396083 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 PROSER2Q86WR7 435 aaPredicted RBP14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 L3MBTL2Q969R5 705 aa14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 AMOTL2Q9Y2J4 779 aa14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 C14orf37Q86TY3 774 aa14.61□□□□□ -0.07
THUMPD1-202ENST00000396083 TBX22Q9Y458 520 aa14.6□□□□□ -0.07
THUMPD1-202ENST00000396083 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
THUMPD1-202ENST00000396083 NRXN3Q9Y4C0 1643 aa14.59□□□□□ -0.07
THUMPD1-202ENST00000396083 PIP4K2BP78356 416 aa14.57□□□□□ -0.08
THUMPD1-202ENST00000396083 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
THUMPD1-202ENST00000396083 PTPRUQ92729 1446 aa14.57□□□□□ -0.08
THUMPD1-202ENST00000396083 UBAP1LF5GYI3 381 aa14.56□□□□□ -0.08
THUMPD1-202ENST00000396083 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
THUMPD1-202ENST00000396083 IFT172Q9UG01 1749 aa14.55□□□□□ -0.08
THUMPD1-202ENST00000396083 ALKQ9UM73 1620 aa14.55□□□□□ -0.08
THUMPD1-202ENST00000396083 TONSLQ96HA7 1378 aa14.54□□□□□ -0.08
THUMPD1-202ENST00000396083 SETBP1Q9Y6X0 1596 aa14.54□□□□□ -0.08
THUMPD1-202ENST00000396083 LRRC7Q96NW7 1537 aa14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 PIK3C2GO75747 1445 aa14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 WAPLQ7Z5K2 1190 aa14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 NBPF1Q3BBV0 1214 aa14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 TRAK1Q9UPV9 953 aa14.53□□□□□ -0.08
THUMPD1-202ENST00000396083 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
THUMPD1-202ENST00000396083 NUTM2FA1L443 756 aa14.51□□□□□ -0.09
THUMPD1-202ENST00000396083 PELP1Q8IZL8 1130 aaKnown RBP14.51□□□□□ -0.09
THUMPD1-202ENST00000396083 C14orf93Q9H972 538 aaKnown RBP14.51□□□□□ -0.09
THUMPD1-202ENST00000396083 ROBO2Q9HCK4 1378 aa14.5□□□□□ -0.09
THUMPD1-202ENST00000396083 CPS1P31327 1500 aa14.5□□□□□ -0.09
THUMPD1-202ENST00000396083 MYOM2P54296 1465 aa14.49□□□□□ -0.09
THUMPD1-202ENST00000396083 NBPF8Q3BBV2 869 aa14.48□□□□□ -0.09
THUMPD1-202ENST00000396083 SETD1AO15047 1707 aaKnown RBP14.48□□□□□ -0.09
THUMPD1-202ENST00000396083 DIP2AQ14689 1571 aa14.48□□□□□ -0.09
THUMPD1-202ENST00000396083 HIRIP3Q9BW71 556 aaPredicted RBP14.48□□□□□ -0.09
THUMPD1-202ENST00000396083 XIRP1Q702N8 1843 aaKnown RBP14.48□□□□□ -0.09
THUMPD1-202ENST00000396083 ASXL1Q8IXJ9 1541 aa14.47□□□□□ -0.09
THUMPD1-202ENST00000396083 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
THUMPD1-202ENST00000396083 PIK3R4Q99570 1358 aa14.46□□□□□ -0.09
THUMPD1-202ENST00000396083 TOM1O60784 492 aa14.46□□□□□ -0.09
THUMPD1-202ENST00000396083 FBXO41Q8TF61 875 aa14.46□□□□□ -0.09
THUMPD1-202ENST00000396083 PRAM1Q96QH2 718 aa14.46□□□□□ -0.09
THUMPD1-202ENST00000396083 YTHDC2Q9H6S0 1430 aaKnown RBP14.46□□□□□ -0.09
THUMPD1-202ENST00000396083 NRXN1Q9ULB1 1477 aa14.46□□□□□ -0.1
THUMPD1-202ENST00000396083 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
THUMPD1-202ENST00000396083 MSH6P52701 1360 aa14.45□□□□□ -0.1
THUMPD1-202ENST00000396083 POGKQ9P215 609 aa14.45□□□□□ -0.1
THUMPD1-202ENST00000396083 NKTRP30414 1462 aaKnown RBP14.45□□□□□ -0.1
THUMPD1-202ENST00000396083 NWD1Q149M9 1564 aa14.45□□□□□ -0.1
THUMPD1-202ENST00000396083 ATF3P18847 181 aa14.44□□□□□ -0.1
THUMPD1-202ENST00000396083 XRN1Q8IZH2 1706 aaKnown RBP14.43□□□□□ -0.1
THUMPD1-202ENST00000396083 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
THUMPD1-202ENST00000396083 MINK1Q8N4C8 1332 aaPredicted RBP14.42□□□□□ -0.1
THUMPD1-202ENST00000396083 ROCK2O75116 1388 aaKnown RBP14.42□□□□□ -0.1
THUMPD1-202ENST00000396083 LRPPRCP42704 1394 aaKnown RBP14.42□□□□□ -0.1
THUMPD1-202ENST00000396083 SLAIN2Q9P270 581 aa14.41□□□□□ -0.1
THUMPD1-202ENST00000396083 STAC3Q96MF2 364 aa14.4□□□□□ -0.1
THUMPD1-202ENST00000396083 ADGRB1O14514 1584 aa14.4□□□□□ -0.1
THUMPD1-202ENST00000396083 DDX17Q92841 729 aaKnown RBP14.4□□□□□ -0.1
THUMPD1-202ENST00000396083 ABCC11Q96J66 1382 aa14.39□□□□□ -0.11
THUMPD1-202ENST00000396083 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
THUMPD1-202ENST00000396083 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.39□□□□□ -0.11
THUMPD1-202ENST00000396083 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
THUMPD1-202ENST00000396083 LAMC1P11047 1609 aa14.38□□□□□ -0.11
THUMPD1-202ENST00000396083 NALCNQ8IZF0 1738 aa14.38□□□□□ -0.11
THUMPD1-202ENST00000396083 PTCH1Q13635 1447 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms