RNA–Protein interactions for RNA: ENST00000395303.7

HLA-DMA-202, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

BASIC

Gene HLA-DMA, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-202ENST00000395303 ACIN1Q9UKV3 1341 aaKnown RBP20.02■□□□□ 0.8
HLA-DMA-202ENST00000395303 TOM1O60784 492 aa20.01■□□□□ 0.79
HLA-DMA-202ENST00000395303 TRIM52Q96A61 297 aa20.01■□□□□ 0.79
HLA-DMA-202ENST00000395303 CLTCL1P53675 1640 aa20.01■□□□□ 0.79
HLA-DMA-202ENST00000395303 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
HLA-DMA-202ENST00000395303 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
HLA-DMA-202ENST00000395303 PIP4K2BP78356 416 aa20■□□□□ 0.79
HLA-DMA-202ENST00000395303 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
HLA-DMA-202ENST00000395303 LRRC7Q96NW7 1537 aa19.99■□□□□ 0.79
HLA-DMA-202ENST00000395303 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
HLA-DMA-202ENST00000395303 SCAF1Q9H7N4 1312 aaKnown RBP19.99■□□□□ 0.79
HLA-DMA-202ENST00000395303 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
HLA-DMA-202ENST00000395303 RIMS2Q9UQ26 1411 aa19.95■□□□□ 0.78
HLA-DMA-202ENST00000395303 RAB3GAP2Q9H2M9 1393 aa19.95■□□□□ 0.78
HLA-DMA-202ENST00000395303 HRCP23327 699 aa19.91■□□□□ 0.78
HLA-DMA-202ENST00000395303 HDGFP51858 240 aaKnown RBP19.91■□□□□ 0.78
HLA-DMA-202ENST00000395303 MPHOSPH9Q99550 1183 aa19.91■□□□□ 0.78
HLA-DMA-202ENST00000395303 PLEKHG1Q9ULL1 1385 aa19.91■□□□□ 0.78
HLA-DMA-202ENST00000395303 XIRP1Q702N8 1843 aaKnown RBP19.9■□□□□ 0.78
HLA-DMA-202ENST00000395303 CHGAP10645 457 aaKnown RBP19.9■□□□□ 0.78
HLA-DMA-202ENST00000395303 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
HLA-DMA-202ENST00000395303 CHD2O14647 1828 aaKnown RBP19.9■□□□□ 0.78
HLA-DMA-202ENST00000395303 NEXMIFQ5QGS0 1516 aa19.87■□□□□ 0.77
HLA-DMA-202ENST00000395303 DIP2AQ14689 1571 aa19.87■□□□□ 0.77
HLA-DMA-202ENST00000395303 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
HLA-DMA-202ENST00000395303 PPLO60437 1756 aa19.86■□□□□ 0.77
HLA-DMA-202ENST00000395303 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
HLA-DMA-202ENST00000395303 ADAMTS13Q76LX8 1427 aa19.84■□□□□ 0.77
HLA-DMA-202ENST00000395303 SETBP1Q9Y6X0 1596 aa19.83■□□□□ 0.77
HLA-DMA-202ENST00000395303 FOXD1Q16676 465 aa19.83■□□□□ 0.77
HLA-DMA-202ENST00000395303 IFT172Q9UG01 1749 aa19.82■□□□□ 0.76
HLA-DMA-202ENST00000395303 PPP1R15AO75807 674 aaPredicted RBP19.81■□□□□ 0.76
HLA-DMA-202ENST00000395303 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
HLA-DMA-202ENST00000395303 SLC26A8Q96RN1 970 aa19.8■□□□□ 0.76
HLA-DMA-202ENST00000395303 TBX22Q9Y458 520 aa19.8■□□□□ 0.76
HLA-DMA-202ENST00000395303 KCNA6P17658 529 aa19.79■□□□□ 0.76
HLA-DMA-202ENST00000395303 NKTRP30414 1462 aaKnown RBP19.79■□□□□ 0.76
HLA-DMA-202ENST00000395303 RPGRIP1LQ68CZ1 1315 aa19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 ZNF326Q5BKZ1 582 aaKnown RBP19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 SETD1AO15047 1707 aaKnown RBP19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 PIK3R4Q99570 1358 aa19.78■□□□□ 0.76
HLA-DMA-202ENST00000395303 SENP3Q9H4L4 574 aaPredicted RBP19.77■□□□□ 0.76
HLA-DMA-202ENST00000395303 TMEM94Q12767 1356 aa19.74■□□□□ 0.75
HLA-DMA-202ENST00000395303 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
HLA-DMA-202ENST00000395303 BCANQ96GW7 911 aa19.74■□□□□ 0.75
HLA-DMA-202ENST00000395303 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
HLA-DMA-202ENST00000395303 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
HLA-DMA-202ENST00000395303 FAM135BQ49AJ0 1406 aa19.73■□□□□ 0.75
HLA-DMA-202ENST00000395303 VGFO15240 615 aaPredicted RBP19.72■□□□□ 0.75
HLA-DMA-202ENST00000395303 PTPRUQ92729 1446 aa19.7■□□□□ 0.74
HLA-DMA-202ENST00000395303 ROBO1Q9Y6N7 1651 aa19.68■□□□□ 0.74
HLA-DMA-202ENST00000395303 RGS17Q9UGC6 210 aaPredicted RBP19.68■□□□□ 0.74
HLA-DMA-202ENST00000395303 NCOA3Q9Y6Q9 1424 aa19.68■□□□□ 0.74
HLA-DMA-202ENST00000395303 PROSER2Q86WR7 435 aaPredicted RBP19.66■□□□□ 0.74
HLA-DMA-202ENST00000395303 RBM33Q96EV2 1170 aaKnown RBP19.65■□□□□ 0.74
HLA-DMA-202ENST00000395303 METP08581 1390 aa19.65■□□□□ 0.74
HLA-DMA-202ENST00000395303 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
HLA-DMA-202ENST00000395303 MYOM2P54296 1465 aa19.63■□□□□ 0.73
HLA-DMA-202ENST00000395303 NRXN1Q9ULB1 1477 aa19.63■□□□□ 0.73
HLA-DMA-202ENST00000395303 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
HLA-DMA-202ENST00000395303 AMOTL2Q9Y2J4 779 aa19.63■□□□□ 0.73
HLA-DMA-202ENST00000395303 ADGRF5Q8IZF2 1346 aa19.62■□□□□ 0.73
HLA-DMA-202ENST00000395303 TRIM26Q12899 539 aaPredicted RBP19.62■□□□□ 0.73
HLA-DMA-202ENST00000395303 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
HLA-DMA-202ENST00000395303 PIK3C2GO75747 1445 aa19.61■□□□□ 0.73
HLA-DMA-202ENST00000395303 LAMC1P11047 1609 aa19.6■□□□□ 0.73
HLA-DMA-202ENST00000395303 KNDC1Q76NI1 1749 aa19.59■□□□□ 0.73
HLA-DMA-202ENST00000395303 MSH6P52701 1360 aa19.58■□□□□ 0.73
HLA-DMA-202ENST00000395303 PTCH1Q13635 1447 aa19.57■□□□□ 0.72
HLA-DMA-202ENST00000395303 ASXL1Q8IXJ9 1541 aa19.56■□□□□ 0.72
HLA-DMA-202ENST00000395303 PHLPP1O60346 1717 aa19.56■□□□□ 0.72
HLA-DMA-202ENST00000395303 NALCNQ8IZF0 1738 aa19.56■□□□□ 0.72
HLA-DMA-202ENST00000395303 STAC3Q96MF2 364 aa19.54■□□□□ 0.72
HLA-DMA-202ENST00000395303 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
HLA-DMA-202ENST00000395303 COL16A1Q07092 1604 aaPredicted RBP19.54■□□□□ 0.72
HLA-DMA-202ENST00000395303 DCCP43146 1447 aa19.53■□□□□ 0.72
HLA-DMA-202ENST00000395303 POTEAQ6S8J7 498 aa19.53■□□□□ 0.72
HLA-DMA-202ENST00000395303 DHX57Q6P158 1386 aaKnown RBP19.53■□□□□ 0.72
HLA-DMA-202ENST00000395303 TECPR2O15040 1411 aa19.52■□□□□ 0.72
HLA-DMA-202ENST00000395303 C19orf44Q9H6X5 657 aa19.51■□□□□ 0.71
HLA-DMA-202ENST00000395303 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
HLA-DMA-202ENST00000395303 ADGRL3Q9HAR2 1447 aa19.51■□□□□ 0.71
HLA-DMA-202ENST00000395303 LRPPRCP42704 1394 aaKnown RBP19.5■□□□□ 0.71
HLA-DMA-202ENST00000395303 ROBO2Q9HCK4 1378 aa19.5■□□□□ 0.71
HLA-DMA-202ENST00000395303 ABCC11Q96J66 1382 aa19.48■□□□□ 0.71
HLA-DMA-202ENST00000395303 JCADQ9P266 1359 aa19.48■□□□□ 0.71
HLA-DMA-202ENST00000395303 KIAA1210Q9ULL0 1709 aa19.48■□□□□ 0.71
HLA-DMA-202ENST00000395303 CADPS2Q86UW7 1296 aa19.47■□□□□ 0.71
HLA-DMA-202ENST00000395303 AHDC1Q5TGY3 1603 aaPredicted RBP19.47■□□□□ 0.71
HLA-DMA-202ENST00000395303 ADGRB1O14514 1584 aa19.46■□□□□ 0.71
HLA-DMA-202ENST00000395303 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
HLA-DMA-202ENST00000395303 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
HLA-DMA-202ENST00000395303 DCAF11Q8TEB1 546 aa19.46■□□□□ 0.71
HLA-DMA-202ENST00000395303 LRP6O75581 1613 aa19.44■□□□□ 0.7
HLA-DMA-202ENST00000395303 ATF3P18847 181 aa19.44■□□□□ 0.7
HLA-DMA-202ENST00000395303 CFAP70Q5T0N1 1121 aa19.44■□□□□ 0.7
HLA-DMA-202ENST00000395303 SIRT1Q96EB6 747 aa19.44■□□□□ 0.7
HLA-DMA-202ENST00000395303 MST1RQ04912 1400 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms