RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SHANK2Q9UPX8 1470 aa18.51■□□□□ 0.55
CLIP2-203ENST00000395060 ERBINQ96RT1 1412 aa18.51■□□□□ 0.55
CLIP2-203ENST00000395060 PLEKHH2Q8IVE3 1493 aa18.51■□□□□ 0.55
CLIP2-203ENST00000395060 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
CLIP2-203ENST00000395060 BLMP54132 1417 aaPredicted RBP18.49■□□□□ 0.55
CLIP2-203ENST00000395060 CDC42BPBQ9Y5S2 1711 aa18.49■□□□□ 0.55
CLIP2-203ENST00000395060 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
CLIP2-203ENST00000395060 CLUAP1Q96AJ1 413 aa18.49■□□□□ 0.55
CLIP2-203ENST00000395060 SLFN5Q08AF3 891 aa18.47■□□□□ 0.55
CLIP2-203ENST00000395060 TNNQ9UQP3 1299 aa18.47■□□□□ 0.55
CLIP2-203ENST00000395060 FAM135AQ9P2D6 1515 aa18.46■□□□□ 0.55
CLIP2-203ENST00000395060 ARHGEF12Q9NZN5 1544 aa18.45■□□□□ 0.54
CLIP2-203ENST00000395060 ZMYM4Q5VZL5 1548 aa18.44■□□□□ 0.54
CLIP2-203ENST00000395060 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
CLIP2-203ENST00000395060 COL17A1Q9UMD9 1497 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-203ENST00000395060 ABCC2Q92887 1545 aa18.43■□□□□ 0.54
CLIP2-203ENST00000395060 A2MP01023 1474 aa18.43■□□□□ 0.54
CLIP2-203ENST00000395060 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
CLIP2-203ENST00000395060 PREX2Q70Z35 1606 aa18.42■□□□□ 0.54
CLIP2-203ENST00000395060 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
CLIP2-203ENST00000395060 ARHGEF5Q12774 1597 aa18.42■□□□□ 0.54
CLIP2-203ENST00000395060 TRAPPC8Q9Y2L5 1435 aa18.42■□□□□ 0.54
CLIP2-203ENST00000395060 KDM5DQ9BY66 1539 aa18.41■□□□□ 0.54
CLIP2-203ENST00000395060 MAGI2Q86UL8 1455 aa18.41■□□□□ 0.54
CLIP2-203ENST00000395060 USP19O94966 1318 aa18.41■□□□□ 0.54
CLIP2-203ENST00000395060 E9PCH4 1651 aa18.41■□□□□ 0.54
CLIP2-203ENST00000395060 RRAGDQ9NQL2 400 aaPredicted RBP18.39■□□□□ 0.53
CLIP2-203ENST00000395060 PLA2R1Q13018 1463 aa18.39■□□□□ 0.53
CLIP2-203ENST00000395060 ZNF521Q96K83 1311 aa18.38■□□□□ 0.53
CLIP2-203ENST00000395060 PLCH2O75038 1416 aa18.38■□□□□ 0.53
CLIP2-203ENST00000395060 BECN1Q14457 450 aa18.37■□□□□ 0.53
CLIP2-203ENST00000395060 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
CLIP2-203ENST00000395060 KIF3BO15066 747 aa18.36■□□□□ 0.53
CLIP2-203ENST00000395060 SHROOM2Q13796 1616 aa18.35■□□□□ 0.53
CLIP2-203ENST00000395060 PANK2Q9BZ23 570 aa18.35■□□□□ 0.53
CLIP2-203ENST00000395060 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
CLIP2-203ENST00000395060 RLBP1P12271 317 aa18.34■□□□□ 0.53
CLIP2-203ENST00000395060 FAM43AQ8N2R8 423 aa18.34■□□□□ 0.53
CLIP2-203ENST00000395060 E9PSI1 815 aa18.33■□□□□ 0.53
CLIP2-203ENST00000395060 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.53
CLIP2-203ENST00000395060 UPF2Q9HAU5 1272 aaKnown RBP18.33■□□□□ 0.52
CLIP2-203ENST00000395060 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
CLIP2-203ENST00000395060 NAP1L5Q96NT1 182 aaPredicted RBP18.32■□□□□ 0.52
CLIP2-203ENST00000395060 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
CLIP2-203ENST00000395060 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
CLIP2-203ENST00000395060 GPRASP1Q5JY77 1395 aa18.31■□□□□ 0.52
CLIP2-203ENST00000395060 UBE2Q2Q8WVN8 375 aa18.31■□□□□ 0.52
CLIP2-203ENST00000395060 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
CLIP2-203ENST00000395060 MYO5CQ9NQX4 1742 aa18.31■□□□□ 0.52
CLIP2-203ENST00000395060 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
CLIP2-203ENST00000395060 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
CLIP2-203ENST00000395060 WDR7Q9Y4E6 1490 aa18.29■□□□□ 0.52
CLIP2-203ENST00000395060 CFAP70Q5T0N1 1121 aa18.29■□□□□ 0.52
CLIP2-203ENST00000395060 RSPH6AQ9H0K4 717 aa18.29■□□□□ 0.52
CLIP2-203ENST00000395060 SCAPERQ9BY12 1400 aa18.29■□□□□ 0.52
CLIP2-203ENST00000395060 CGNL1Q0VF96 1302 aa18.28■□□□□ 0.52
CLIP2-203ENST00000395060 CHGAP10645 457 aaKnown RBP18.27■□□□□ 0.52
CLIP2-203ENST00000395060 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
CLIP2-203ENST00000395060 EIF3AQ14152 1382 aaKnown RBP18.27■□□□□ 0.52
CLIP2-203ENST00000395060 TRMT2AQ8IZ69 625 aaKnown RBP18.27■□□□□ 0.51
CLIP2-203ENST00000395060 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
CLIP2-203ENST00000395060 XRCC6P12956 609 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLIP2-203ENST00000395060 FOXD4L1Q9NU39 408 aa18.25■□□□□ 0.51
CLIP2-203ENST00000395060 MAPK8IP3Q9UPT6 1336 aa18.25■□□□□ 0.51
CLIP2-203ENST00000395060 PRDM15P57071 1507 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-203ENST00000395060 CLASP1Q7Z460 1538 aa18.25■□□□□ 0.51
CLIP2-203ENST00000395060 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
CLIP2-203ENST00000395060 GOLGA6L3A6NEY3 463 aa18.24■□□□□ 0.51
CLIP2-203ENST00000395060 CDCA8Q53HL2 280 aa18.24■□□□□ 0.51
CLIP2-203ENST00000395060 TCP11L2Q8N4U5 519 aa18.23■□□□□ 0.51
CLIP2-203ENST00000395060 RARSP54136 660 aaKnown RBP18.23■□□□□ 0.51
CLIP2-203ENST00000395060 ANTXR1Q9H6X2 564 aa18.23■□□□□ 0.51
CLIP2-203ENST00000395060 PDE3AQ14432 1141 aa18.22■□□□□ 0.51
CLIP2-203ENST00000395060 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
CLIP2-203ENST00000395060 GGT6Q6P531 493 aa18.21■□□□□ 0.51
CLIP2-203ENST00000395060 FANCAO15360 1455 aa18.21■□□□□ 0.51
CLIP2-203ENST00000395060 L1TD1Q5T7N2 865 aaKnown RBP18.21■□□□□ 0.51
CLIP2-203ENST00000395060 TSR2Q969E8 191 aaKnown RBP18.21■□□□□ 0.51
CLIP2-203ENST00000395060 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.51
CLIP2-203ENST00000395060 FTSJ3Q8IY81 847 aaKnown RBP18.21■□□□□ 0.5
CLIP2-203ENST00000395060 ABCC1P33527 1531 aa18.2■□□□□ 0.5
CLIP2-203ENST00000395060 MAST1Q9Y2H9 1570 aa18.2■□□□□ 0.5
CLIP2-203ENST00000395060 SLC12A5Q9H2X9 1139 aa18.19■□□□□ 0.5
CLIP2-203ENST00000395060 UNC13BO14795 1591 aa18.19■□□□□ 0.5
CLIP2-203ENST00000395060 UHRF1BP1LA0JNW5 1464 aa18.19■□□□□ 0.5
CLIP2-203ENST00000395060 MCM4P33991 863 aa18.19■□□□□ 0.5
CLIP2-203ENST00000395060 TRAK1Q9UPV9 953 aa18.19■□□□□ 0.5
CLIP2-203ENST00000395060 PNNQ9H307 717 aaKnown RBP18.18■□□□□ 0.5
CLIP2-203ENST00000395060 ASXL1Q8IXJ9 1541 aa18.18■□□□□ 0.5
CLIP2-203ENST00000395060 PMFBP1Q8TBY8 1022 aa18.18■□□□□ 0.5
CLIP2-203ENST00000395060 TRAK2O60296 914 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 PLXNC1O60486 1568 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 OSCARQ8IYS5 282 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 INSRP06213 1382 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 NUTM2DQ5VT03 806 aaPredicted RBP18.17■□□□□ 0.5
CLIP2-203ENST00000395060 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 ASXL2Q76L83 1435 aa18.17■□□□□ 0.5
CLIP2-203ENST00000395060 SAFB2Q14151 953 aaKnown RBP eCLIP18.16■□□□□ 0.5
CLIP2-203ENST00000395060 KANK1Q14678 1352 aa18.16■□□□□ 0.5
CLIP2-203ENST00000395060 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms