RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 TMEM2Q9UHN6 1383 aa12.81□□□□□ -0.36
APLF-202ENST00000394342 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
APLF-202ENST00000394342 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
APLF-202ENST00000394342 IQSEC2Q5JU85 1478 aa12.79□□□□□ -0.36
APLF-202ENST00000394342 EID1Q9Y6B2 187 aa12.79□□□□□ -0.36
APLF-202ENST00000394342 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
APLF-202ENST00000394342 CERKQ8TCT0 537 aa12.78□□□□□ -0.36
APLF-202ENST00000394342 CHD2O14647 1828 aaKnown RBP12.78□□□□□ -0.36
APLF-202ENST00000394342 ZFYVE9O95405 1425 aa12.78□□□□□ -0.36
APLF-202ENST00000394342 CPS1P31327 1500 aa12.78□□□□□ -0.36
APLF-202ENST00000394342 LTKP29376 864 aa12.77□□□□□ -0.37
APLF-202ENST00000394342 XIRP1Q702N8 1843 aaKnown RBP12.76□□□□□ -0.37
APLF-202ENST00000394342 ZNF335Q9H4Z2 1342 aaPredicted RBP12.76□□□□□ -0.37
APLF-202ENST00000394342 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
APLF-202ENST00000394342 PPLO60437 1756 aa12.76□□□□□ -0.37
APLF-202ENST00000394342 RAB3GAP2Q9H2M9 1393 aa12.75□□□□□ -0.37
APLF-202ENST00000394342 HDGFP51858 240 aaKnown RBP12.74□□□□□ -0.37
APLF-202ENST00000394342 FBXO41Q8TF61 875 aa12.74□□□□□ -0.37
APLF-202ENST00000394342 IFT172Q9UG01 1749 aa12.74□□□□□ -0.37
APLF-202ENST00000394342 CHGAP10645 457 aaKnown RBP12.73□□□□□ -0.37
APLF-202ENST00000394342 DIP2AQ14689 1571 aa12.73□□□□□ -0.37
APLF-202ENST00000394342 PLEKHG1Q9ULL1 1385 aa12.72□□□□□ -0.37
APLF-202ENST00000394342 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
APLF-202ENST00000394342 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
APLF-202ENST00000394342 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.72□□□□□ -0.37
APLF-202ENST00000394342 MPHOSPH9Q99550 1183 aa12.72□□□□□ -0.37
APLF-202ENST00000394342 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
APLF-202ENST00000394342 NRXN3Q9Y4C0 1643 aa12.71□□□□□ -0.37
APLF-202ENST00000394342 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
APLF-202ENST00000394342 NWD1Q149M9 1564 aa12.71□□□□□ -0.37
APLF-202ENST00000394342 HRCP23327 699 aa12.7□□□□□ -0.38
APLF-202ENST00000394342 SETBP1Q9Y6X0 1596 aa12.69□□□□□ -0.38
APLF-202ENST00000394342 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
APLF-202ENST00000394342 CCDC144AA2RUR9 1427 aa12.68□□□□□ -0.38
APLF-202ENST00000394342 SETD1AO15047 1707 aaKnown RBP12.68□□□□□ -0.38
APLF-202ENST00000394342 LRRC7Q96NW7 1537 aa12.67□□□□□ -0.38
APLF-202ENST00000394342 ZNF326Q5BKZ1 582 aaKnown RBP12.66□□□□□ -0.38
APLF-202ENST00000394342 NKTRP30414 1462 aaKnown RBP12.65□□□□□ -0.38
APLF-202ENST00000394342 ADAMTS13Q76LX8 1427 aa12.65□□□□□ -0.38
APLF-202ENST00000394342 BCANQ96GW7 911 aa12.65□□□□□ -0.38
APLF-202ENST00000394342 NUTM2DQ5VT03 806 aaPredicted RBP12.64□□□□□ -0.39
APLF-202ENST00000394342 SLC26A8Q96RN1 970 aa12.64□□□□□ -0.39
APLF-202ENST00000394342 TBX22Q9Y458 520 aa12.64□□□□□ -0.39
APLF-202ENST00000394342 XRN1Q8IZH2 1706 aaKnown RBP12.64□□□□□ -0.39
APLF-202ENST00000394342 RPGRIP1LQ68CZ1 1315 aa12.63□□□□□ -0.39
APLF-202ENST00000394342 SPATA31E1Q6ZUB1 1445 aa12.63□□□□□ -0.39
APLF-202ENST00000394342 KCNA6P17658 529 aa12.63□□□□□ -0.39
APLF-202ENST00000394342 PIK3R4Q99570 1358 aa12.63□□□□□ -0.39
APLF-202ENST00000394342 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
APLF-202ENST00000394342 ALKQ9UM73 1620 aa12.61□□□□□ -0.39
APLF-202ENST00000394342 ANKRD30BQ9BXX2 1392 aa12.6□□□□□ -0.39
APLF-202ENST00000394342 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
APLF-202ENST00000394342 UBAP1LF5GYI3 381 aa12.59□□□□□ -0.39
APLF-202ENST00000394342 LAMC1P11047 1609 aa12.59□□□□□ -0.39
APLF-202ENST00000394342 TOM1O60784 492 aa12.58□□□□□ -0.4
APLF-202ENST00000394342 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
APLF-202ENST00000394342 TMEM94Q12767 1356 aa12.57□□□□□ -0.4
APLF-202ENST00000394342 KNDC1Q76NI1 1749 aa12.57□□□□□ -0.4
APLF-202ENST00000394342 PTPRUQ92729 1446 aa12.56□□□□□ -0.4
APLF-202ENST00000394342 NCOA3Q9Y6Q9 1424 aa12.56□□□□□ -0.4
APLF-202ENST00000394342 PROSER2Q86WR7 435 aaPredicted RBP12.56□□□□□ -0.4
APLF-202ENST00000394342 RNF216Q9NWF9 866 aaPredicted RBP12.56□□□□□ -0.4
APLF-202ENST00000394342 MYOM2P54296 1465 aa12.55□□□□□ -0.4
APLF-202ENST00000394342 RGL3Q3MIN7 710 aa12.55□□□□□ -0.4
APLF-202ENST00000394342 NALCNQ8IZF0 1738 aa12.54□□□□□ -0.4
APLF-202ENST00000394342 TRIM26Q12899 539 aaPredicted RBP12.54□□□□□ -0.4
APLF-202ENST00000394342 METP08581 1390 aa12.54□□□□□ -0.4
APLF-202ENST00000394342 NRXN1Q9ULB1 1477 aa12.53□□□□□ -0.4
APLF-202ENST00000394342 AMOTL2Q9Y2J4 779 aa12.53□□□□□ -0.4
APLF-202ENST00000394342 PIK3C2GO75747 1445 aa12.53□□□□□ -0.4
APLF-202ENST00000394342 PRAG1Q86YV5 1406 aa12.53□□□□□ -0.4
APLF-202ENST00000394342 ROBO1Q9Y6N7 1651 aa12.52□□□□□ -0.4
APLF-202ENST00000394342 ADGRF5Q8IZF2 1346 aa12.52□□□□□ -0.41
APLF-202ENST00000394342 MSH6P52701 1360 aa12.52□□□□□ -0.41
APLF-202ENST00000394342 PTCH1Q13635 1447 aa12.51□□□□□ -0.41
APLF-202ENST00000394342 KIAA1210Q9ULL0 1709 aa12.51□□□□□ -0.41
APLF-202ENST00000394342 PIP4K2BP78356 416 aa12.5□□□□□ -0.41
APLF-202ENST00000394342 ASXL1Q8IXJ9 1541 aa12.5□□□□□ -0.41
APLF-202ENST00000394342 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
APLF-202ENST00000394342 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
APLF-202ENST00000394342 DCCP43146 1447 aa12.48□□□□□ -0.41
APLF-202ENST00000394342 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
APLF-202ENST00000394342 PHLPP1O60346 1717 aa12.48□□□□□ -0.41
APLF-202ENST00000394342 FAM135BQ49AJ0 1406 aa12.47□□□□□ -0.41
APLF-202ENST00000394342 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
APLF-202ENST00000394342 C19orf44Q9H6X5 657 aa12.47□□□□□ -0.41
APLF-202ENST00000394342 TECPR2O15040 1411 aa12.46□□□□□ -0.41
APLF-202ENST00000394342 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
APLF-202ENST00000394342 LRPPRCP42704 1394 aaKnown RBP12.45□□□□□ -0.42
APLF-202ENST00000394342 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
APLF-202ENST00000394342 ROBO2Q9HCK4 1378 aa12.45□□□□□ -0.42
APLF-202ENST00000394342 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
APLF-202ENST00000394342 RGPD8O14715 1765 aaPredicted RBP12.45□□□□□ -0.42
APLF-202ENST00000394342 YTHDC2Q9H6S0 1430 aaKnown RBP12.45□□□□□ -0.42
APLF-202ENST00000394342 ATF3P18847 181 aa12.44□□□□□ -0.42
APLF-202ENST00000394342 HSPA1LP34931 641 aa12.44□□□□□ -0.42
APLF-202ENST00000394342 CADPS2Q86UW7 1296 aa12.44□□□□□ -0.42
APLF-202ENST00000394342 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
APLF-202ENST00000394342 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
APLF-202ENST00000394342 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms