RNA–Protein interactions for RNA: ENST00000392927.7

SYCP3-203, Transcript of synaptonemal complex protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP3, Length 1,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-203ENST00000392927 TXNDC2Q86VQ3 553 aa18.48■□□□□ 0.55
SYCP3-203ENST00000392927 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
SYCP3-203ENST00000392927 HFM1A2PYH4 1435 aa18.47■□□□□ 0.55
SYCP3-203ENST00000392927 CNKSR2Q8WXI2 1034 aa18.44■□□□□ 0.54
SYCP3-203ENST00000392927 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
SYCP3-203ENST00000392927 ZFYVE9O95405 1425 aa18.42■□□□□ 0.54
SYCP3-203ENST00000392927 UBAP1LF5GYI3 381 aa18.41■□□□□ 0.54
SYCP3-203ENST00000392927 RIMS2Q9UQ26 1411 aa18.4■□□□□ 0.54
SYCP3-203ENST00000392927 LRRC7Q96NW7 1537 aa18.4■□□□□ 0.54
SYCP3-203ENST00000392927 TRPM2O94759 1503 aa18.39■□□□□ 0.54
SYCP3-203ENST00000392927 CHGAP10645 457 aaKnown RBP18.39■□□□□ 0.53
SYCP3-203ENST00000392927 CLTCL1P53675 1640 aa18.38■□□□□ 0.53
SYCP3-203ENST00000392927 XIRP1Q702N8 1843 aaKnown RBP18.38■□□□□ 0.53
SYCP3-203ENST00000392927 NWD1Q149M9 1564 aa18.37■□□□□ 0.53
SYCP3-203ENST00000392927 PPP1R15AO75807 674 aaPredicted RBP18.36■□□□□ 0.53
SYCP3-203ENST00000392927 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
SYCP3-203ENST00000392927 ALKQ9UM73 1620 aa18.35■□□□□ 0.53
SYCP3-203ENST00000392927 TRIM52Q96A61 297 aa18.34■□□□□ 0.53
SYCP3-203ENST00000392927 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
SYCP3-203ENST00000392927 KIF1BO60333 1816 aa18.34■□□□□ 0.53
SYCP3-203ENST00000392927 BCANQ96GW7 911 aa18.33■□□□□ 0.52
SYCP3-203ENST00000392927 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
SYCP3-203ENST00000392927 NKTRP30414 1462 aaKnown RBP18.32■□□□□ 0.52
SYCP3-203ENST00000392927 CHD2O14647 1828 aaKnown RBP18.31■□□□□ 0.52
SYCP3-203ENST00000392927 TOM1O60784 492 aa18.31■□□□□ 0.52
SYCP3-203ENST00000392927 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
SYCP3-203ENST00000392927 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.3■□□□□ 0.52
SYCP3-203ENST00000392927 PIP4K2BP78356 416 aa18.29■□□□□ 0.52
SYCP3-203ENST00000392927 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
SYCP3-203ENST00000392927 NRXN3Q9Y4C0 1643 aa18.28■□□□□ 0.52
SYCP3-203ENST00000392927 SLC4A1APQ9BWU0 796 aaKnown RBP18.28■□□□□ 0.52
SYCP3-203ENST00000392927 ADAMTS13Q76LX8 1427 aa18.28■□□□□ 0.52
SYCP3-203ENST00000392927 NEXMIFQ5QGS0 1516 aa18.28■□□□□ 0.52
SYCP3-203ENST00000392927 KCNA6P17658 529 aa18.27■□□□□ 0.52
SYCP3-203ENST00000392927 SETBP1Q9Y6X0 1596 aa18.26■□□□□ 0.51
SYCP3-203ENST00000392927 TMEM94Q12767 1356 aa18.26■□□□□ 0.51
SYCP3-203ENST00000392927 ZNF326Q5BKZ1 582 aaKnown RBP18.25■□□□□ 0.51
SYCP3-203ENST00000392927 TBX22Q9Y458 520 aa18.22■□□□□ 0.51
SYCP3-203ENST00000392927 SETD5Q9C0A6 1442 aa18.22■□□□□ 0.51
SYCP3-203ENST00000392927 PROSER2Q86WR7 435 aaPredicted RBP18.21■□□□□ 0.51
SYCP3-203ENST00000392927 PIK3R4Q99570 1358 aa18.2■□□□□ 0.5
SYCP3-203ENST00000392927 PPLO60437 1756 aa18.2■□□□□ 0.5
SYCP3-203ENST00000392927 RBM33Q96EV2 1170 aaKnown RBP18.2■□□□□ 0.5
SYCP3-203ENST00000392927 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
SYCP3-203ENST00000392927 HSPA1LP34931 641 aa18.19■□□□□ 0.5
SYCP3-203ENST00000392927 CCDC144AA2RUR9 1427 aa18.17■□□□□ 0.5
SYCP3-203ENST00000392927 SETD1AO15047 1707 aaKnown RBP18.17■□□□□ 0.5
SYCP3-203ENST00000392927 MSH6P52701 1360 aa18.17■□□□□ 0.5
SYCP3-203ENST00000392927 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
SYCP3-203ENST00000392927 ROBO1Q9Y6N7 1651 aa18.16■□□□□ 0.5
SYCP3-203ENST00000392927 MPHOSPH9Q99550 1183 aa18.16■□□□□ 0.5
SYCP3-203ENST00000392927 DISP3Q9P2K9 1392 aa18.16■□□□□ 0.5
SYCP3-203ENST00000392927 PTPRUQ92729 1446 aa18.15■□□□□ 0.5
SYCP3-203ENST00000392927 IFT172Q9UG01 1749 aa18.15■□□□□ 0.5
SYCP3-203ENST00000392927 KCNA4P22459 653 aa18.14■□□□□ 0.49
SYCP3-203ENST00000392927 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.13■□□□□ 0.49
SYCP3-203ENST00000392927 ACIN1Q9UKV3 1341 aaKnown RBP18.13■□□□□ 0.49
SYCP3-203ENST00000392927 MED1Q15648 1581 aaPredicted RBP18.13■□□□□ 0.49
SYCP3-203ENST00000392927 RNF216Q9NWF9 866 aaPredicted RBP18.12■□□□□ 0.49
SYCP3-203ENST00000392927 METP08581 1390 aa18.12■□□□□ 0.49
SYCP3-203ENST00000392927 NCOA3Q9Y6Q9 1424 aa18.12■□□□□ 0.49
SYCP3-203ENST00000392927 FAM135BQ49AJ0 1406 aa18.1■□□□□ 0.49
SYCP3-203ENST00000392927 SPATA31E1Q6ZUB1 1445 aa18.1■□□□□ 0.49
SYCP3-203ENST00000392927 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
SYCP3-203ENST00000392927 C14orf37Q86TY3 774 aa18.1■□□□□ 0.49
SYCP3-203ENST00000392927 AMOTL2Q9Y2J4 779 aa18.1■□□□□ 0.49
SYCP3-203ENST00000392927 VGFO15240 615 aaPredicted RBP18.08■□□□□ 0.48
SYCP3-203ENST00000392927 NALCNQ8IZF0 1738 aa18.08■□□□□ 0.48
SYCP3-203ENST00000392927 HOXD11P31277 338 aaPredicted RBP18.06■□□□□ 0.48
SYCP3-203ENST00000392927 PHLPP1O60346 1717 aa18.06■□□□□ 0.48
SYCP3-203ENST00000392927 DCCP43146 1447 aa18.04■□□□□ 0.48
SYCP3-203ENST00000392927 PTCH1Q13635 1447 aa18.04■□□□□ 0.48
SYCP3-203ENST00000392927 NPM3O75607 178 aaKnown RBP18.03■□□□□ 0.48
SYCP3-203ENST00000392927 RGL3Q3MIN7 710 aa18.03■□□□□ 0.48
SYCP3-203ENST00000392927 ANKRD30BQ9BXX2 1392 aa18.03■□□□□ 0.48
SYCP3-203ENST00000392927 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
SYCP3-203ENST00000392927 ADGRL3Q9HAR2 1447 aa18.02■□□□□ 0.48
SYCP3-203ENST00000392927 SLAIN2Q9P270 581 aa18.02■□□□□ 0.48
SYCP3-203ENST00000392927 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
SYCP3-203ENST00000392927 ATF3P18847 181 aa18.01■□□□□ 0.47
SYCP3-203ENST00000392927 CADPS2Q86UW7 1296 aa18.01■□□□□ 0.47
SYCP3-203ENST00000392927 ADGRF5Q8IZF2 1346 aa18■□□□□ 0.47
SYCP3-203ENST00000392927 PIK3C2GO75747 1445 aa18■□□□□ 0.47
SYCP3-203ENST00000392927 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
SYCP3-203ENST00000392927 COL16A1Q07092 1604 aaPredicted RBP18■□□□□ 0.47
SYCP3-203ENST00000392927 LAMC1P11047 1609 aa17.99■□□□□ 0.47
SYCP3-203ENST00000392927 KNDC1Q76NI1 1749 aa17.99■□□□□ 0.47
SYCP3-203ENST00000392927 MYOM2P54296 1465 aa17.99■□□□□ 0.47
SYCP3-203ENST00000392927 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
SYCP3-203ENST00000392927 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
SYCP3-203ENST00000392927 MST1RQ04912 1400 aa17.97■□□□□ 0.47
SYCP3-203ENST00000392927 ILDR2Q71H61 639 aa17.96■□□□□ 0.47
SYCP3-203ENST00000392927 NRXN1Q9ULB1 1477 aa17.95■□□□□ 0.46
SYCP3-203ENST00000392927 NHSL1Q5SYE7 1610 aa17.95■□□□□ 0.46
SYCP3-203ENST00000392927 HRCP23327 699 aa17.95■□□□□ 0.46
SYCP3-203ENST00000392927 CDC42BPGQ6DT37 1551 aa17.92■□□□□ 0.46
SYCP3-203ENST00000392927 TECPR2O15040 1411 aa17.92■□□□□ 0.46
SYCP3-203ENST00000392927 SHPRHQ149N8 1683 aa17.91■□□□□ 0.46
SYCP3-203ENST00000392927 BRINP3Q76B58 766 aa17.91■□□□□ 0.46
SYCP3-203ENST00000392927 LRPPRCP42704 1394 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms