RNA–Protein interactions for RNA: ENST00000392824.8

CSHL1-204, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSHL1, Length 823 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-204ENST00000392824 NEURL4Q96JN8 1562 aa23.65■■□□□ 1.38
CSHL1-204ENST00000392824 POLR1AO95602 1720 aaPredicted RBP23.64■■□□□ 1.38
CSHL1-204ENST00000392824 ZNF335Q9H4Z2 1342 aaPredicted RBP23.63■■□□□ 1.37
CSHL1-204ENST00000392824 ZFYVE9O95405 1425 aa23.63■■□□□ 1.37
CSHL1-204ENST00000392824 CLTCL1P53675 1640 aa23.62■■□□□ 1.37
CSHL1-204ENST00000392824 SENP3Q9H4L4 574 aaPredicted RBP23.62■■□□□ 1.37
CSHL1-204ENST00000392824 CERKQ8TCT0 537 aa23.61■■□□□ 1.37
CSHL1-204ENST00000392824 SLC26A8Q96RN1 970 aa23.6■■□□□ 1.37
CSHL1-204ENST00000392824 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
CSHL1-204ENST00000392824 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
CSHL1-204ENST00000392824 PLEKHG1Q9ULL1 1385 aa23.59■■□□□ 1.37
CSHL1-204ENST00000392824 IQGAP1P46940 1657 aa23.58■■□□□ 1.37
CSHL1-204ENST00000392824 VGFO15240 615 aaPredicted RBP23.57■■□□□ 1.36
CSHL1-204ENST00000392824 ANKRD30BQ9BXX2 1392 aa23.56■■□□□ 1.36
CSHL1-204ENST00000392824 MYO5BQ9ULV0 1848 aa23.56■■□□□ 1.36
CSHL1-204ENST00000392824 TBX22Q9Y458 520 aa23.53■■□□□ 1.36
CSHL1-204ENST00000392824 KIF1BO60333 1816 aa23.53■■□□□ 1.36
CSHL1-204ENST00000392824 LTBP4Q8N2S1 1624 aa23.5■■□□□ 1.35
CSHL1-204ENST00000392824 KCNA6P17658 529 aa23.49■■□□□ 1.35
CSHL1-204ENST00000392824 PCGF6Q9BYE7 350 aa23.49■■□□□ 1.35
CSHL1-204ENST00000392824 SPATA31E1Q6ZUB1 1445 aa23.49■■□□□ 1.35
CSHL1-204ENST00000392824 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
CSHL1-204ENST00000392824 CPS1P31327 1500 aa23.45■■□□□ 1.34
CSHL1-204ENST00000392824 ADAMTS13Q76LX8 1427 aa23.44■■□□□ 1.34
CSHL1-204ENST00000392824 FBXO41Q8TF61 875 aa23.42■■□□□ 1.34
CSHL1-204ENST00000392824 ADGRF5Q8IZF2 1346 aa23.41■■□□□ 1.34
CSHL1-204ENST00000392824 PROSER2Q86WR7 435 aaPredicted RBP23.41■■□□□ 1.34
CSHL1-204ENST00000392824 PIK3R4Q99570 1358 aa23.4■■□□□ 1.34
CSHL1-204ENST00000392824 DHX57Q6P158 1386 aaKnown RBP23.4■■□□□ 1.34
CSHL1-204ENST00000392824 IQSEC2Q5JU85 1478 aa23.38■■□□□ 1.33
CSHL1-204ENST00000392824 DCAF11Q8TEB1 546 aa23.38■■□□□ 1.33
CSHL1-204ENST00000392824 AMOTL2Q9Y2J4 779 aa23.38■■□□□ 1.33
CSHL1-204ENST00000392824 DIP2AQ14689 1571 aa23.38■■□□□ 1.33
CSHL1-204ENST00000392824 SETBP1Q9Y6X0 1596 aa23.37■■□□□ 1.33
CSHL1-204ENST00000392824 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
CSHL1-204ENST00000392824 STAC3Q96MF2 364 aa23.36■■□□□ 1.33
CSHL1-204ENST00000392824 METP08581 1390 aa23.35■■□□□ 1.33
CSHL1-204ENST00000392824 LRRC7Q96NW7 1537 aa23.34■■□□□ 1.33
CSHL1-204ENST00000392824 UBAP1LF5GYI3 381 aa23.34■■□□□ 1.33
CSHL1-204ENST00000392824 NEUROD1Q13562 356 aa23.34■■□□□ 1.33
CSHL1-204ENST00000392824 ILDR1Q86SU0 546 aaPredicted RBP23.33■■□□□ 1.33
CSHL1-204ENST00000392824 SIN3AQ96ST3 1273 aa23.33■■□□□ 1.33
CSHL1-204ENST00000392824 PPLO60437 1756 aa23.32■■□□□ 1.32
CSHL1-204ENST00000392824 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
CSHL1-204ENST00000392824 TOM1O60784 492 aa23.32■■□□□ 1.32
CSHL1-204ENST00000392824 RBM33Q96EV2 1170 aaKnown RBP23.32■■□□□ 1.32
CSHL1-204ENST00000392824 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
CSHL1-204ENST00000392824 NRXN3Q9Y4C0 1643 aa23.3■■□□□ 1.32
CSHL1-204ENST00000392824 STRCP1A6NGW2 1772 aa23.3■■□□□ 1.32
CSHL1-204ENST00000392824 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
CSHL1-204ENST00000392824 PTPRUQ92729 1446 aa23.29■■□□□ 1.32
CSHL1-204ENST00000392824 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
CSHL1-204ENST00000392824 ALKQ9UM73 1620 aa23.28■■□□□ 1.32
CSHL1-204ENST00000392824 MYOM2P54296 1465 aa23.28■■□□□ 1.32
CSHL1-204ENST00000392824 NWD1Q149M9 1564 aa23.27■■□□□ 1.32
CSHL1-204ENST00000392824 PIK3C2GO75747 1445 aa23.27■■□□□ 1.32
CSHL1-204ENST00000392824 CFAP70Q5T0N1 1121 aa23.27■■□□□ 1.32
CSHL1-204ENST00000392824 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
CSHL1-204ENST00000392824 TMEM132EQ6IEE7 984 aa23.25■■□□□ 1.31
CSHL1-204ENST00000392824 STK26Q9P289 416 aa23.24■■□□□ 1.31
CSHL1-204ENST00000392824 IFT172Q9UG01 1749 aa23.23■■□□□ 1.31
CSHL1-204ENST00000392824 PIP4K2BP78356 416 aa23.23■■□□□ 1.31
CSHL1-204ENST00000392824 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
CSHL1-204ENST00000392824 MSH6P52701 1360 aa23.23■■□□□ 1.31
CSHL1-204ENST00000392824 NCOA3Q9Y6Q9 1424 aa23.23■■□□□ 1.31
CSHL1-204ENST00000392824 NRXN1Q9ULB1 1477 aa23.23■■□□□ 1.31
CSHL1-204ENST00000392824 L3MBTL2Q969R5 705 aa23.22■■□□□ 1.31
CSHL1-204ENST00000392824 C19orf44Q9H6X5 657 aa23.2■■□□□ 1.3
CSHL1-204ENST00000392824 LRPPRCP42704 1394 aaKnown RBP23.17■■□□□ 1.3
CSHL1-204ENST00000392824 ATF3P18847 181 aa23.17■■□□□ 1.3
CSHL1-204ENST00000392824 ABCC11Q96J66 1382 aa23.15■■□□□ 1.3
CSHL1-204ENST00000392824 ROBO2Q9HCK4 1378 aa23.15■■□□□ 1.3
CSHL1-204ENST00000392824 CADPS2Q86UW7 1296 aa23.15■■□□□ 1.3
CSHL1-204ENST00000392824 XRN1Q8IZH2 1706 aaKnown RBP23.14■■□□□ 1.3
CSHL1-204ENST00000392824 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
CSHL1-204ENST00000392824 YTHDC2Q9H6S0 1430 aaKnown RBP23.14■■□□□ 1.29
CSHL1-204ENST00000392824 TONSLQ96HA7 1378 aa23.14■■□□□ 1.29
CSHL1-204ENST00000392824 SETD1AO15047 1707 aaKnown RBP23.13■■□□□ 1.29
CSHL1-204ENST00000392824 CCER1Q8TC90 406 aaPredicted RBP23.12■■□□□ 1.29
CSHL1-204ENST00000392824 SIRT1Q96EB6 747 aa23.12■■□□□ 1.29
CSHL1-204ENST00000392824 SLAIN2Q9P270 581 aa23.12■■□□□ 1.29
CSHL1-204ENST00000392824 WAPLQ7Z5K2 1190 aa23.11■■□□□ 1.29
CSHL1-204ENST00000392824 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
CSHL1-204ENST00000392824 XIRP1Q702N8 1843 aaKnown RBP23.1■■□□□ 1.29
CSHL1-204ENST00000392824 CLSPNQ9HAW4 1339 aa23.09■■□□□ 1.29
CSHL1-204ENST00000392824 LAMC1P11047 1609 aa23.09■■□□□ 1.29
CSHL1-204ENST00000392824 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
CSHL1-204ENST00000392824 TECPR2O15040 1411 aa23.08■■□□□ 1.29
CSHL1-204ENST00000392824 POGKQ9P215 609 aa23.08■■□□□ 1.29
CSHL1-204ENST00000392824 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.28
CSHL1-204ENST00000392824 ADGRL3Q9HAR2 1447 aa23.07■■□□□ 1.28
CSHL1-204ENST00000392824 PRAM1Q96QH2 718 aa23.06■■□□□ 1.28
CSHL1-204ENST00000392824 NBPF1Q3BBV0 1214 aa23.05■■□□□ 1.28
CSHL1-204ENST00000392824 DCCP43146 1447 aa23.04■■□□□ 1.28
CSHL1-204ENST00000392824 FAM135BQ49AJ0 1406 aa23.04■■□□□ 1.28
CSHL1-204ENST00000392824 SAFB2Q14151 953 aaKnown RBP eCLIP23.03■■□□□ 1.28
CSHL1-204ENST00000392824 PLEKHH1Q9ULM0 1364 aa23.02■■□□□ 1.28
CSHL1-204ENST00000392824 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
CSHL1-204ENST00000392824 HSPA1LP34931 641 aa23.01■■□□□ 1.27
CSHL1-204ENST00000392824 SIPA1L2Q9P2F8 1722 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms