RNA–Protein interactions for RNA: ENST00000392345.6

CCDC57-204, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC57, Length 678 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-204ENST00000392345 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
CCDC57-204ENST00000392345 NUTM2DQ5VT03 806 aaPredicted RBP20.95■□□□□ 0.94
CCDC57-204ENST00000392345 TRPM2O94759 1503 aa20.94■□□□□ 0.94
CCDC57-204ENST00000392345 PLEKHG1Q9ULL1 1385 aa20.94■□□□□ 0.94
CCDC57-204ENST00000392345 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
CCDC57-204ENST00000392345 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
CCDC57-204ENST00000392345 PPP1R15AO75807 674 aaPredicted RBP20.91■□□□□ 0.94
CCDC57-204ENST00000392345 BCANQ96GW7 911 aa20.9■□□□□ 0.94
CCDC57-204ENST00000392345 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
CCDC57-204ENST00000392345 NWD1Q149M9 1564 aa20.88■□□□□ 0.93
CCDC57-204ENST00000392345 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
CCDC57-204ENST00000392345 FOXD1Q16676 465 aa20.87■□□□□ 0.93
CCDC57-204ENST00000392345 PIP4K2BP78356 416 aa20.86■□□□□ 0.93
CCDC57-204ENST00000392345 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCDC57-204ENST00000392345 KCNA6P17658 529 aa20.85■□□□□ 0.93
CCDC57-204ENST00000392345 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
CCDC57-204ENST00000392345 SCAF1Q9H7N4 1312 aaKnown RBP20.84■□□□□ 0.93
CCDC57-204ENST00000392345 HDGFP51858 240 aaKnown RBP20.84■□□□□ 0.93
CCDC57-204ENST00000392345 RBM33Q96EV2 1170 aaKnown RBP20.84■□□□□ 0.93
CCDC57-204ENST00000392345 TMEM94Q12767 1356 aa20.84■□□□□ 0.93
CCDC57-204ENST00000392345 TOM1O60784 492 aa20.83■□□□□ 0.93
CCDC57-204ENST00000392345 ZNF326Q5BKZ1 582 aaKnown RBP20.83■□□□□ 0.93
CCDC57-204ENST00000392345 SETD5Q9C0A6 1442 aa20.83■□□□□ 0.93
CCDC57-204ENST00000392345 NEXMIFQ5QGS0 1516 aa20.83■□□□□ 0.92
CCDC57-204ENST00000392345 NKTRP30414 1462 aaKnown RBP20.82■□□□□ 0.92
CCDC57-204ENST00000392345 NRXN3Q9Y4C0 1643 aa20.81■□□□□ 0.92
CCDC57-204ENST00000392345 DIP2AQ14689 1571 aa20.8■□□□□ 0.92
CCDC57-204ENST00000392345 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
CCDC57-204ENST00000392345 RAB3GAP2Q9H2M9 1393 aa20.8■□□□□ 0.92
CCDC57-204ENST00000392345 MPHOSPH9Q99550 1183 aa20.79■□□□□ 0.92
CCDC57-204ENST00000392345 SETBP1Q9Y6X0 1596 aa20.79■□□□□ 0.92
CCDC57-204ENST00000392345 PROSER2Q86WR7 435 aaPredicted RBP20.78■□□□□ 0.92
CCDC57-204ENST00000392345 CHD2O14647 1828 aaKnown RBP20.77■□□□□ 0.92
CCDC57-204ENST00000392345 HSPA1LP34931 641 aa20.77■□□□□ 0.92
CCDC57-204ENST00000392345 PTPRUQ92729 1446 aa20.77■□□□□ 0.91
CCDC57-204ENST00000392345 KIF1BO60333 1816 aa20.76■□□□□ 0.91
CCDC57-204ENST00000392345 PIK3R4Q99570 1358 aa20.72■□□□□ 0.91
CCDC57-204ENST00000392345 METP08581 1390 aa20.72■□□□□ 0.91
CCDC57-204ENST00000392345 CCDC144AA2RUR9 1427 aa20.71■□□□□ 0.91
CCDC57-204ENST00000392345 XRN1Q8IZH2 1706 aaKnown RBP20.7■□□□□ 0.9
CCDC57-204ENST00000392345 SPATA31E1Q6ZUB1 1445 aa20.7■□□□□ 0.9
CCDC57-204ENST00000392345 AMOTL2Q9Y2J4 779 aa20.68■□□□□ 0.9
CCDC57-204ENST00000392345 MSH6P52701 1360 aa20.68■□□□□ 0.9
CCDC57-204ENST00000392345 PPLO60437 1756 aa20.66■□□□□ 0.9
CCDC57-204ENST00000392345 SETD1AO15047 1707 aaKnown RBP20.65■□□□□ 0.9
CCDC57-204ENST00000392345 DISP3Q9P2K9 1392 aa20.65■□□□□ 0.9
CCDC57-204ENST00000392345 RPGRIP1LQ68CZ1 1315 aa20.64■□□□□ 0.89
CCDC57-204ENST00000392345 RGL3Q3MIN7 710 aa20.64■□□□□ 0.89
CCDC57-204ENST00000392345 VGFO15240 615 aaPredicted RBP20.63■□□□□ 0.89
CCDC57-204ENST00000392345 FAM135BQ49AJ0 1406 aa20.62■□□□□ 0.89
CCDC57-204ENST00000392345 ADGRF5Q8IZF2 1346 aa20.62■□□□□ 0.89
CCDC57-204ENST00000392345 ROBO1Q9Y6N7 1651 aa20.62■□□□□ 0.89
CCDC57-204ENST00000392345 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
CCDC57-204ENST00000392345 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
CCDC57-204ENST00000392345 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
CCDC57-204ENST00000392345 IFT172Q9UG01 1749 aa20.61■□□□□ 0.89
CCDC57-204ENST00000392345 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.59■□□□□ 0.89
CCDC57-204ENST00000392345 MED1Q15648 1581 aaPredicted RBP20.58■□□□□ 0.88
CCDC57-204ENST00000392345 SLAIN2Q9P270 581 aa20.57■□□□□ 0.88
CCDC57-204ENST00000392345 ANKRD30BQ9BXX2 1392 aa20.57■□□□□ 0.88
CCDC57-204ENST00000392345 ROBO2Q9HCK4 1378 aa20.56■□□□□ 0.88
CCDC57-204ENST00000392345 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CCDC57-204ENST00000392345 C19orf44Q9H6X5 657 aa20.55■□□□□ 0.88
CCDC57-204ENST00000392345 PIK3C2GO75747 1445 aa20.54■□□□□ 0.88
CCDC57-204ENST00000392345 PTCH1Q13635 1447 aa20.54■□□□□ 0.88
CCDC57-204ENST00000392345 HRCP23327 699 aa20.54■□□□□ 0.88
CCDC57-204ENST00000392345 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
CCDC57-204ENST00000392345 NALCNQ8IZF0 1738 aa20.53■□□□□ 0.88
CCDC57-204ENST00000392345 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
CCDC57-204ENST00000392345 ATF3P18847 181 aa20.52■□□□□ 0.88
CCDC57-204ENST00000392345 ILDR2Q71H61 639 aa20.52■□□□□ 0.88
CCDC57-204ENST00000392345 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
CCDC57-204ENST00000392345 DCCP43146 1447 aa20.52■□□□□ 0.87
CCDC57-204ENST00000392345 MYOM2P54296 1465 aa20.5■□□□□ 0.87
CCDC57-204ENST00000392345 NRXN1Q9ULB1 1477 aa20.5■□□□□ 0.87
CCDC57-204ENST00000392345 MST1RQ04912 1400 aa20.49■□□□□ 0.87
CCDC57-204ENST00000392345 TMEM132EQ6IEE7 984 aa20.47■□□□□ 0.87
CCDC57-204ENST00000392345 COL16A1Q07092 1604 aaPredicted RBP20.46■□□□□ 0.87
CCDC57-204ENST00000392345 BRINP3Q76B58 766 aa20.46■□□□□ 0.87
CCDC57-204ENST00000392345 STK26Q9P289 416 aa20.46■□□□□ 0.87
CCDC57-204ENST00000392345 PHLPP1O60346 1717 aa20.46■□□□□ 0.87
CCDC57-204ENST00000392345 AHDC1Q5TGY3 1603 aaPredicted RBP20.45■□□□□ 0.86
CCDC57-204ENST00000392345 LRPPRCP42704 1394 aaKnown RBP20.45■□□□□ 0.86
CCDC57-204ENST00000392345 TECPR2O15040 1411 aa20.44■□□□□ 0.86
CCDC57-204ENST00000392345 PLEKHH1Q9ULM0 1364 aa20.43■□□□□ 0.86
CCDC57-204ENST00000392345 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
CCDC57-204ENST00000392345 C14orf93Q9H972 538 aaKnown RBP20.42■□□□□ 0.86
CCDC57-204ENST00000392345 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
CCDC57-204ENST00000392345 WAPLQ7Z5K2 1190 aa20.41■□□□□ 0.86
CCDC57-204ENST00000392345 KNDC1Q76NI1 1749 aa20.41■□□□□ 0.86
CCDC57-204ENST00000392345 C1orf167Q5SNV9 1468 aa20.4■□□□□ 0.86
CCDC57-204ENST00000392345 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
CCDC57-204ENST00000392345 ABCC11Q96J66 1382 aa20.4■□□□□ 0.86
CCDC57-204ENST00000392345 LAMC1P11047 1609 aa20.38■□□□□ 0.85
CCDC57-204ENST00000392345 DDX17Q92841 729 aaKnown RBP20.38■□□□□ 0.85
CCDC57-204ENST00000392345 KDM2AQ9Y2K7 1162 aa20.38■□□□□ 0.85
CCDC57-204ENST00000392345 JCADQ9P266 1359 aa20.37■□□□□ 0.85
CCDC57-204ENST00000392345 DCAF11Q8TEB1 546 aa20.37■□□□□ 0.85
CCDC57-204ENST00000392345 NHSL1Q5SYE7 1610 aa20.37■□□□□ 0.85
CCDC57-204ENST00000392345 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms