RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 IGHDP01880 384 aa21.18■□□□□ 0.98
TNIP1-202ENST00000389378 CDC42BPBQ9Y5S2 1711 aa21.17■□□□□ 0.98
TNIP1-202ENST00000389378 WDR7Q9Y4E6 1490 aa21.17■□□□□ 0.98
TNIP1-202ENST00000389378 NEUROD2Q15784 382 aa21.17■□□□□ 0.98
TNIP1-202ENST00000389378 PRKCSHP14314 528 aaPredicted RBP21.16■□□□□ 0.98
TNIP1-202ENST00000389378 CANXP27824 592 aaKnown RBP21.14■□□□□ 0.97
TNIP1-202ENST00000389378 PANK1Q8TE04 598 aa21.14■□□□□ 0.97
TNIP1-202ENST00000389378 MYO5CQ9NQX4 1742 aa21.14■□□□□ 0.97
TNIP1-202ENST00000389378 SEC24BO95487 1268 aa21.13■□□□□ 0.97
TNIP1-202ENST00000389378 TNNT2P45379 298 aaPredicted RBP21.13■□□□□ 0.97
TNIP1-202ENST00000389378 COG6Q9Y2V7 657 aa21.13■□□□□ 0.97
TNIP1-202ENST00000389378 INSRP06213 1382 aa21.13■□□□□ 0.97
TNIP1-202ENST00000389378 RRP7AQ9Y3A4 280 aaKnown RBP21.1■□□□□ 0.97
TNIP1-202ENST00000389378 SLKQ9H2G2 1235 aaPredicted RBP21.1■□□□□ 0.97
TNIP1-202ENST00000389378 CDCA8Q53HL2 280 aa21.08■□□□□ 0.97
TNIP1-202ENST00000389378 PREX2Q70Z35 1606 aa21.08■□□□□ 0.96
TNIP1-202ENST00000389378 TTC37Q6PGP7 1564 aa21.07■□□□□ 0.96
TNIP1-202ENST00000389378 BCL2L13Q9BXK5 485 aa21.07■□□□□ 0.96
TNIP1-202ENST00000389378 TRMT2AQ8IZ69 625 aaKnown RBP21.06■□□□□ 0.96
TNIP1-202ENST00000389378 CFAP70Q5T0N1 1121 aa21.06■□□□□ 0.96
TNIP1-202ENST00000389378 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
TNIP1-202ENST00000389378 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
TNIP1-202ENST00000389378 ARXQ96QS3 562 aa21.05■□□□□ 0.96
TNIP1-202ENST00000389378 UNC13BO14795 1591 aa21.05■□□□□ 0.96
TNIP1-202ENST00000389378 E9PSI1 815 aa21.05■□□□□ 0.96
TNIP1-202ENST00000389378 TNNQ9UQP3 1299 aa21.05■□□□□ 0.96
TNIP1-202ENST00000389378 NKTRP30414 1462 aaKnown RBP21.04■□□□□ 0.96
TNIP1-202ENST00000389378 EIF5BO60841 1220 aaKnown RBP21.04■□□□□ 0.96
TNIP1-202ENST00000389378 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
TNIP1-202ENST00000389378 USP19O94966 1318 aa21.03■□□□□ 0.96
TNIP1-202ENST00000389378 LAMC1P11047 1609 aa21.03■□□□□ 0.96
TNIP1-202ENST00000389378 ASXL1Q8IXJ9 1541 aa21.03■□□□□ 0.96
TNIP1-202ENST00000389378 CENPJQ9HC77 1338 aaPredicted RBP21.02■□□□□ 0.96
TNIP1-202ENST00000389378 CLUAP1Q96AJ1 413 aa21.02■□□□□ 0.96
TNIP1-202ENST00000389378 POGKQ9P215 609 aa21.02■□□□□ 0.96
TNIP1-202ENST00000389378 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.02■□□□□ 0.961e-6■■■□□ 14.6
TNIP1-202ENST00000389378 IQGAP3Q86VI3 1631 aa21.01■□□□□ 0.95
TNIP1-202ENST00000389378 SPRYD3Q8NCJ5 442 aa21.01■□□□□ 0.95
TNIP1-202ENST00000389378 EIF3AQ14152 1382 aaKnown RBP21■□□□□ 0.95
TNIP1-202ENST00000389378 WWC1Q8IX03 1113 aa20.99■□□□□ 0.95
TNIP1-202ENST00000389378 SCAF11Q99590 1463 aaKnown RBP20.99■□□□□ 0.95
TNIP1-202ENST00000389378 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
TNIP1-202ENST00000389378 EFCAB2Q5VUJ9 269 aa20.98■□□□□ 0.95
TNIP1-202ENST00000389378 TRAPPC8Q9Y2L5 1435 aa20.97■□□□□ 0.95
TNIP1-202ENST00000389378 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
TNIP1-202ENST00000389378 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
TNIP1-202ENST00000389378 SPAG9O60271 1321 aaKnown RBP20.96■□□□□ 0.95
TNIP1-202ENST00000389378 RLBP1P12271 317 aa20.96■□□□□ 0.95
TNIP1-202ENST00000389378 MAST1Q9Y2H9 1570 aa20.96■□□□□ 0.95
TNIP1-202ENST00000389378 ATP10AO60312 1499 aa20.95■□□□□ 0.94
TNIP1-202ENST00000389378 PCDHB15Q9Y5E8 787 aa20.95■□□□□ 0.94
TNIP1-202ENST00000389378 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
TNIP1-202ENST00000389378 MADDQ8WXG6 1647 aa20.94■□□□□ 0.94
TNIP1-202ENST00000389378 RNF17Q9BXT8 1623 aaKnown RBP20.94■□□□□ 0.94
TNIP1-202ENST00000389378 CHGAP10645 457 aaKnown RBP20.94■□□□□ 0.94
TNIP1-202ENST00000389378 PDE3AQ14432 1141 aa20.94■□□□□ 0.94
TNIP1-202ENST00000389378 KIF3BO15066 747 aa20.92■□□□□ 0.94
TNIP1-202ENST00000389378 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
TNIP1-202ENST00000389378 MORC1Q86VD1 984 aa20.92■□□□□ 0.94
TNIP1-202ENST00000389378 SYNMO15061 1565 aa20.92■□□□□ 0.94
TNIP1-202ENST00000389378 BECN1Q14457 450 aa20.91■□□□□ 0.94
TNIP1-202ENST00000389378 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
TNIP1-202ENST00000389378 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
TNIP1-202ENST00000389378 IQGAP1P46940 1657 aa20.9■□□□□ 0.94
TNIP1-202ENST00000389378 RARSP54136 660 aaKnown RBP20.9■□□□□ 0.94
TNIP1-202ENST00000389378 PDZRN3Q9UPQ7 1066 aa20.9■□□□□ 0.94
TNIP1-202ENST00000389378 MAPK8IP3Q9UPT6 1336 aa20.9■□□□□ 0.94
TNIP1-202ENST00000389378 TRAK1Q9UPV9 953 aa20.9■□□□□ 0.94
TNIP1-202ENST00000389378 PLXNC1O60486 1568 aa20.89■□□□□ 0.94
TNIP1-202ENST00000389378 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
TNIP1-202ENST00000389378 ERCC6L2Q5T890 1561 aa20.87■□□□□ 0.93
TNIP1-202ENST00000389378 ABCC2Q92887 1545 aa20.86■□□□□ 0.93
TNIP1-202ENST00000389378 MYOM1P52179 1685 aa20.86■□□□□ 0.93
TNIP1-202ENST00000389378 GZF1Q9H116 711 aaPredicted RBP20.86■□□□□ 0.93
TNIP1-202ENST00000389378 NPC1L1Q9UHC9 1359 aa20.86■□□□□ 0.93
TNIP1-202ENST00000389378 UPF2Q9HAU5 1272 aaKnown RBP20.85■□□□□ 0.93
TNIP1-202ENST00000389378 ERVK-7P63135 1459 aa20.85■□□□□ 0.93
TNIP1-202ENST00000389378 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 UGGT1Q9NYU2 1555 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 PLCH2O75038 1416 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 CLTCL1P53675 1640 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 MTHFSP49914 203 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 TMEM132EQ6IEE7 984 aa20.84■□□□□ 0.93
TNIP1-202ENST00000389378 SCAPERQ9BY12 1400 aa20.83■□□□□ 0.93
TNIP1-202ENST00000389378 RUNDC1Q96C34 613 aa20.83■□□□□ 0.93
TNIP1-202ENST00000389378 PMFBP1Q8TBY8 1022 aa20.83■□□□□ 0.92
TNIP1-202ENST00000389378 NSD3Q9BZ95 1437 aa20.82■□□□□ 0.92
TNIP1-202ENST00000389378 NUTM2DQ5VT03 806 aaPredicted RBP20.81■□□□□ 0.92
TNIP1-202ENST00000389378 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
TNIP1-202ENST00000389378 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
TNIP1-202ENST00000389378 TRPM2O94759 1503 aa20.8■□□□□ 0.92
TNIP1-202ENST00000389378 MFAP1P55081 439 aaKnown RBP20.8■□□□□ 0.92
TNIP1-202ENST00000389378 TBC1D32Q96NH3 1257 aa20.8■□□□□ 0.92
TNIP1-202ENST00000389378 ANTXR1Q9H6X2 564 aa20.8■□□□□ 0.92
TNIP1-202ENST00000389378 U2AF1L5P0DN76 240 aaPredicted RBP20.79■□□□□ 0.92
TNIP1-202ENST00000389378 U2AF1Q01081 240 aaKnown RBP eCLIP20.79■□□□□ 0.92
TNIP1-202ENST00000389378 SPHKAPQ2M3C7 1700 aa20.79■□□□□ 0.92
TNIP1-202ENST00000389378 POLR3AO14802 1390 aaPredicted RBP20.78■□□□□ 0.92
TNIP1-202ENST00000389378 KANK1Q14678 1352 aa20.78■□□□□ 0.92
TNIP1-202ENST00000389378 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms