RNA–Protein interactions for RNA: ENST00000388996.9

KCNQ3-201, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KCNQ3, Length 11,510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-201ENST00000388996 MCTP1Q6DN14 999 aa15.11■□□□□ 0.01
KCNQ3-201ENST00000388996 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
KCNQ3-201ENST00000388996 RUFY2Q8WXA3 655 aa15.1■□□□□ 0.01
KCNQ3-201ENST00000388996 AMOTL1Q8IY63 956 aa15.1■□□□□ 0.01
KCNQ3-201ENST00000388996 ANKRD45Q5TZF3 282 aa15.1■□□□□ 0.01
KCNQ3-201ENST00000388996 TSR1Q2NL82 804 aaKnown RBP15.09■□□□□ 0.01
KCNQ3-201ENST00000388996 RRBP1Q9P2E9 1410 aaKnown RBP15.09■□□□□ 0.01
KCNQ3-201ENST00000388996 TPM1P09493 284 aa15.09■□□□□ 0.01
KCNQ3-201ENST00000388996 BCL2L13Q9BXK5 485 aa15.09■□□□□ 0.01
KCNQ3-201ENST00000388996 RRP1P56182 461 aaKnown RBP15.08■□□□□ 0.01
KCNQ3-201ENST00000388996 FAM184AQ8NB25 1140 aa15.08■□□□□ 0
KCNQ3-201ENST00000388996 ERICH3Q5RHP9 1530 aa15.08■□□□□ 0
KCNQ3-201ENST00000388996 VPS37DQ86XT2 251 aa15.08■□□□□ 0
KCNQ3-201ENST00000388996 SYNE3Q6ZMZ3 975 aa15.08■□□□□ 0
KCNQ3-201ENST00000388996 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
KCNQ3-201ENST00000388996 TPM2P07951 284 aa15.07■□□□□ 0
KCNQ3-201ENST00000388996 FAM161AQ3B820 660 aa15.07■□□□□ 0
KCNQ3-201ENST00000388996 RAD54L2Q9Y4B4 1467 aa15.07■□□□□ 0
KCNQ3-201ENST00000388996 MEX3CQ5U5Q3 659 aaKnown RBP15.07■□□□□ 0
KCNQ3-201ENST00000388996 PSME1Q06323 249 aa15.07■□□□□ 0
KCNQ3-201ENST00000388996 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
KCNQ3-201ENST00000388996 DDX19BQ9UMR2 479 aa15.05■□□□□ 0
KCNQ3-201ENST00000388996 IFIT2P09913 472 aaKnown RBP15.05■□□□□ 0
KCNQ3-201ENST00000388996 EFCAB5A4FU69 1503 aa15.05■□□□□ 0
KCNQ3-201ENST00000388996 EHBP1L1Q8N3D4 1523 aa15.05■□□□□ -0
KCNQ3-201ENST00000388996 GOLGA6L19H0YKK7 550 aa15.05■□□□□ -0
KCNQ3-201ENST00000388996 ANO2Q9NQ90 1003 aa15.05■□□□□ -0
KCNQ3-201ENST00000388996 MSH5O43196 834 aa15.04■□□□□ -0
KCNQ3-201ENST00000388996 DDX58O95786 925 aaKnown RBP15.04■□□□□ -0
KCNQ3-201ENST00000388996 EIF2S2P20042 333 aaKnown RBP15.04■□□□□ -0
KCNQ3-201ENST00000388996 CPLX1O14810 134 aa15.04■□□□□ -0
KCNQ3-201ENST00000388996 NGEFQ8N5V2 710 aa15.04■□□□□ -0
KCNQ3-201ENST00000388996 DIAPH1O60610 1272 aaKnown RBP15.03■□□□□ -0
KCNQ3-201ENST00000388996 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
KCNQ3-201ENST00000388996 ELL2O00472 640 aaPredicted RBP15.03■□□□□ -0
KCNQ3-201ENST00000388996 APPP05067 770 aa15.03■□□□□ -0
KCNQ3-201ENST00000388996 PLIN1O60240 522 aa15.03■□□□□ -0
KCNQ3-201ENST00000388996 SKOR2Q2VWA4 1001 aaPredicted RBP15.03■□□□□ -0
KCNQ3-201ENST00000388996 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.03■□□□□ -0
KCNQ3-201ENST00000388996 LRRC9Q6ZRR7 1453 aa15.03■□□□□ -0
KCNQ3-201ENST00000388996 CASKIN1Q8WXD9 1431 aa15.03■□□□□ -0
KCNQ3-201ENST00000388996 CTDP1Q9Y5B0 961 aaPredicted RBP15.03■□□□□ -0
KCNQ3-201ENST00000388996 CPLX2Q6PUV4 134 aaKnown RBP15.02■□□□□ -0
KCNQ3-201ENST00000388996 TRIM29Q14134 588 aa15.02■□□□□ -0
KCNQ3-201ENST00000388996 BECN2A8MW95 431 aa15.02■□□□□ -0
KCNQ3-201ENST00000388996 OSCARQ8IYS5 282 aa15.02□□□□□ -0.01
KCNQ3-201ENST00000388996 API5Q9BZZ5 524 aaKnown RBP15.02□□□□□ -0.01
KCNQ3-201ENST00000388996 G3BP1Q13283 466 aaKnown RBP eCLIP15.02□□□□□ -0.01
KCNQ3-201ENST00000388996 PRKRIP1Q9H875 184 aaPredicted RBP15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 CCDC70Q6NSX1 233 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 HOOK1Q9UJC3 728 aaKnown RBP15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 NCOA2Q15596 1464 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 RAD21O60216 631 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 RNF20Q5VTR2 975 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 ANKRD20A12PQ8NF67 263 aa15.01□□□□□ -0.01
KCNQ3-201ENST00000388996 RIPK4P57078 832 aa15□□□□□ -0.01
KCNQ3-201ENST00000388996 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
KCNQ3-201ENST00000388996 SYNJ1O43426 1573 aa15□□□□□ -0.01
KCNQ3-201ENST00000388996 COG6Q9Y2V7 657 aa15□□□□□ -0.01
KCNQ3-201ENST00000388996 FBXW7Q969H0 707 aa15□□□□□ -0.01
KCNQ3-201ENST00000388996 CCAR2Q8N163 923 aaKnown RBP14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 SYNJ2O15056 1496 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 FOXD4L6Q3SYB3 417 aaPredicted RBP14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 FOXD4L3Q6VB84 417 aaPredicted RBP14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 CNTLNQ9NXG0 1405 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 TSHZ2Q9NRE2 1034 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 NECTIN2Q92692 538 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 TNNT3P45378 269 aaPredicted RBP14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 NFXL1Q6ZNB6 911 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
KCNQ3-201ENST00000388996 TRDNQ13061 729 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 FKBP5Q13451 457 aaPredicted RBP14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 CYB5RLQ6IPT4 315 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 TOP2BQ02880 1626 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 DHX16O60231 1041 aaKnown RBP14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 NINLQ9Y2I6 1382 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 ATF3P18847 181 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 PDE4AP27815 886 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 DDX49Q9Y6V7 483 aaKnown RBP14.98□□□□□ -0.01
KCNQ3-201ENST00000388996 IPO7O95373 1038 aaKnown RBP14.97□□□□□ -0.01
KCNQ3-201ENST00000388996 APAF1O14727 1248 aa14.97□□□□□ -0.01
KCNQ3-201ENST00000388996 ERC2O15083 957 aa14.97□□□□□ -0.01
KCNQ3-201ENST00000388996 GRIN2BQ13224 1484 aa14.97□□□□□ -0.01
KCNQ3-201ENST00000388996 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
KCNQ3-201ENST00000388996 CCDC43Q96MW1 224 aaKnown RBP14.96□□□□□ -0.01
KCNQ3-201ENST00000388996 GOLGA4Q13439 2230 aaKnown RBP14.96□□□□□ -0.01
KCNQ3-201ENST00000388996 TSPYL4Q9UJ04 414 aa14.96□□□□□ -0.01
KCNQ3-201ENST00000388996 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.02
KCNQ3-201ENST00000388996 GNAI1P63096 354 aa14.95□□□□□ -0.02
KCNQ3-201ENST00000388996 SMG6Q86US8 1419 aaKnown RBP14.95□□□□□ -0.02
KCNQ3-201ENST00000388996 CCDC7Q96M83 1385 aa14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 C9orf84Q5VXU9 1444 aa14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 CCDC47Q96A33 483 aaKnown RBP14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 AQRO60306 1485 aaKnown RBP eCLIP14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 RBM33Q96EV2 1170 aaKnown RBP14.94□□□□□ -0.02
KCNQ3-201ENST00000388996 PCMTD1Q96MG8 357 aaPredicted RBP14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms