RNA–Protein interactions for RNA: ENST00000388837.6

KRT18-202, Transcript of keratin 18, humanhuman

APPRIS P1 TSL 5 BASIC

Gene KRT18, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-202ENST00000388837 DHX57Q6P158 1386 aaKnown RBP28.93■■■□□ 2.22
KRT18-202ENST00000388837 ZNF326Q5BKZ1 582 aaKnown RBP28.93■■■□□ 2.22
KRT18-202ENST00000388837 ZFYVE9O95405 1425 aa28.92■■■□□ 2.22
KRT18-202ENST00000388837 EID1Q9Y6B2 187 aa28.89■■■□□ 2.22
KRT18-202ENST00000388837 NPHP4O75161 1426 aaPredicted RBP28.88■■■□□ 2.21
KRT18-202ENST00000388837 NEXMIFQ5QGS0 1516 aa28.88■■■□□ 2.21
KRT18-202ENST00000388837 RGL3Q3MIN7 710 aa28.86■■■□□ 2.21
KRT18-202ENST00000388837 MED14O60244 1454 aa28.86■■■□□ 2.21
KRT18-202ENST00000388837 PPLO60437 1756 aa28.86■■■□□ 2.21
KRT18-202ENST00000388837 SPATA31E1Q6ZUB1 1445 aa28.85■■■□□ 2.21
KRT18-202ENST00000388837 IFT172Q9UG01 1749 aa28.84■■■□□ 2.21
KRT18-202ENST00000388837 PPP1R15AO75807 674 aaPredicted RBP28.84■■■□□ 2.21
KRT18-202ENST00000388837 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
KRT18-202ENST00000388837 BCANQ96GW7 911 aa28.78■■■□□ 2.2
KRT18-202ENST00000388837 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
KRT18-202ENST00000388837 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
KRT18-202ENST00000388837 SIN3AQ96ST3 1273 aa28.76■■■□□ 2.19
KRT18-202ENST00000388837 SLC26A8Q96RN1 970 aa28.75■■■□□ 2.19
KRT18-202ENST00000388837 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
KRT18-202ENST00000388837 NRXN3Q9Y4C0 1643 aa28.75■■■□□ 2.19
KRT18-202ENST00000388837 ZNF335Q9H4Z2 1342 aaPredicted RBP28.72■■■□□ 2.19
KRT18-202ENST00000388837 STRCP1A6NGW2 1772 aa28.72■■■□□ 2.19
KRT18-202ENST00000388837 NEUROD1Q13562 356 aa28.7■■■□□ 2.19
KRT18-202ENST00000388837 RPGRIP1LQ68CZ1 1315 aa28.7■■■□□ 2.18
KRT18-202ENST00000388837 ADAMTS13Q76LX8 1427 aa28.68■■■□□ 2.18
KRT18-202ENST00000388837 SETBP1Q9Y6X0 1596 aa28.68■■■□□ 2.18
KRT18-202ENST00000388837 ADGRF5Q8IZF2 1346 aa28.67■■■□□ 2.18
KRT18-202ENST00000388837 VGFO15240 615 aaPredicted RBP28.65■■■□□ 2.18
KRT18-202ENST00000388837 LTBP4Q8N2S1 1624 aa28.64■■■□□ 2.18
KRT18-202ENST00000388837 SETD1AO15047 1707 aaKnown RBP28.64■■■□□ 2.17
KRT18-202ENST00000388837 KDM2AQ9Y2K7 1162 aa28.62■■■□□ 2.17
KRT18-202ENST00000388837 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
KRT18-202ENST00000388837 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
KRT18-202ENST00000388837 DCAF11Q8TEB1 546 aa28.61■■■□□ 2.17
KRT18-202ENST00000388837 ALKQ9UM73 1620 aa28.59■■■□□ 2.17
KRT18-202ENST00000388837 MYOM2P54296 1465 aa28.59■■■□□ 2.17
KRT18-202ENST00000388837 TBX22Q9Y458 520 aa28.56■■■□□ 2.16
KRT18-202ENST00000388837 PIK3C2GO75747 1445 aa28.56■■■□□ 2.16
KRT18-202ENST00000388837 CCER1Q8TC90 406 aaPredicted RBP28.54■■■□□ 2.16
KRT18-202ENST00000388837 METP08581 1390 aa28.54■■■□□ 2.16
KRT18-202ENST00000388837 NRXN1Q9ULB1 1477 aa28.54■■■□□ 2.16
KRT18-202ENST00000388837 NWD1Q149M9 1564 aa28.53■■■□□ 2.16
KRT18-202ENST00000388837 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
KRT18-202ENST00000388837 L3MBTL2Q969R5 705 aa28.52■■■□□ 2.16
KRT18-202ENST00000388837 XIRP1Q702N8 1843 aaKnown RBP28.5■■■□□ 2.15
KRT18-202ENST00000388837 CPS1P31327 1500 aa28.49■■■□□ 2.15
KRT18-202ENST00000388837 ASXL1Q8IXJ9 1541 aa28.49■■■□□ 2.15
KRT18-202ENST00000388837 XRN1Q8IZH2 1706 aaKnown RBP28.48■■■□□ 2.15
KRT18-202ENST00000388837 LAMC1P11047 1609 aa28.48■■■□□ 2.15
KRT18-202ENST00000388837 KCNA6P17658 529 aa28.48■■■□□ 2.15
KRT18-202ENST00000388837 CFAP70Q5T0N1 1121 aa28.47■■■□□ 2.15
KRT18-202ENST00000388837 RBM33Q96EV2 1170 aaKnown RBP28.47■■■□□ 2.15
KRT18-202ENST00000388837 LRRC7Q96NW7 1537 aa28.46■■■□□ 2.15
KRT18-202ENST00000388837 CERKQ8TCT0 537 aa28.45■■■□□ 2.15
KRT18-202ENST00000388837 TONSLQ96HA7 1378 aa28.45■■■□□ 2.14
KRT18-202ENST00000388837 TMEM132EQ6IEE7 984 aa28.44■■■□□ 2.14
KRT18-202ENST00000388837 AMOTL2Q9Y2J4 779 aa28.44■■■□□ 2.14
KRT18-202ENST00000388837 PIK3R4Q99570 1358 aa28.44■■■□□ 2.14
KRT18-202ENST00000388837 NKTRP30414 1462 aaKnown RBP28.42■■■□□ 2.14
KRT18-202ENST00000388837 C14orf93Q9H972 538 aaKnown RBP28.41■■■□□ 2.14
KRT18-202ENST00000388837 PRAG1Q86YV5 1406 aa28.4■■■□□ 2.14
KRT18-202ENST00000388837 PROSER2Q86WR7 435 aaPredicted RBP28.39■■■□□ 2.14
KRT18-202ENST00000388837 STK26Q9P289 416 aa28.38■■■□□ 2.13
KRT18-202ENST00000388837 CLSPNQ9HAW4 1339 aa28.38■■■□□ 2.13
KRT18-202ENST00000388837 STAC3Q96MF2 364 aa28.37■■■□□ 2.13
KRT18-202ENST00000388837 KIAA1210Q9ULL0 1709 aa28.36■■■□□ 2.13
KRT18-202ENST00000388837 TMEM94Q12767 1356 aa28.36■■■□□ 2.13
KRT18-202ENST00000388837 KNDC1Q76NI1 1749 aa28.35■■■□□ 2.13
KRT18-202ENST00000388837 ADGRB1O14514 1584 aa28.35■■■□□ 2.13
KRT18-202ENST00000388837 TRPM1Q7Z4N2 1603 aa28.34■■■□□ 2.13
KRT18-202ENST00000388837 YTHDC2Q9H6S0 1430 aaKnown RBP28.33■■■□□ 2.13
KRT18-202ENST00000388837 ROBO2Q9HCK4 1378 aa28.32■■■□□ 2.12
KRT18-202ENST00000388837 NBPF8Q3BBV2 869 aa28.3■■■□□ 2.12
KRT18-202ENST00000388837 LRPPRCP42704 1394 aaKnown RBP28.3■■■□□ 2.12
KRT18-202ENST00000388837 NBPF1Q3BBV0 1214 aa28.29■■■□□ 2.12
KRT18-202ENST00000388837 IQSEC2Q5JU85 1478 aa28.29■■■□□ 2.12
KRT18-202ENST00000388837 NALCNQ8IZF0 1738 aa28.29■■■□□ 2.12
KRT18-202ENST00000388837 PTCH1Q13635 1447 aa28.28■■■□□ 2.12
KRT18-202ENST00000388837 C14orf37Q86TY3 774 aa28.26■■■□□ 2.11
KRT18-202ENST00000388837 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.25■■■□□ 2.11
KRT18-202ENST00000388837 ARHGEF28Q8N1W1 1705 aaKnown RBP28.25■■■□□ 2.11
KRT18-202ENST00000388837 TECPR2O15040 1411 aa28.24■■■□□ 2.11
KRT18-202ENST00000388837 WAPLQ7Z5K2 1190 aa28.24■■■□□ 2.11
KRT18-202ENST00000388837 TRAK1Q9UPV9 953 aa28.24■■■□□ 2.11
KRT18-202ENST00000388837 ABCC11Q96J66 1382 aa28.23■■■□□ 2.11
KRT18-202ENST00000388837 PLEKHH1Q9ULM0 1364 aa28.23■■■□□ 2.11
KRT18-202ENST00000388837 UBAP1LF5GYI3 381 aa28.2■■■□□ 2.11
KRT18-202ENST00000388837 MSH6P52701 1360 aa28.19■■■□□ 2.1
KRT18-202ENST00000388837 SAFB2Q14151 953 aaKnown RBP eCLIP28.18■■■□□ 2.1
KRT18-202ENST00000388837 ROCK2O75116 1388 aaKnown RBP28.18■■■□□ 2.1
KRT18-202ENST00000388837 DLC1Q96QB1 1528 aa28.17■■■□□ 2.1
KRT18-202ENST00000388837 PRAM1Q96QH2 718 aa28.17■■■□□ 2.1
KRT18-202ENST00000388837 ADGRL3Q9HAR2 1447 aa28.16■■■□□ 2.1
KRT18-202ENST00000388837 RALGAPBQ86X10 1494 aa28.15■■■□□ 2.1
KRT18-202ENST00000388837 NCOA3Q9Y6Q9 1424 aa28.15■■■□□ 2.1
KRT18-202ENST00000388837 FAM135BQ49AJ0 1406 aa28.13■■■□□ 2.09
KRT18-202ENST00000388837 PIP4K2BP78356 416 aa28.12■■■□□ 2.09
KRT18-202ENST00000388837 POGKQ9P215 609 aa28.12■■■□□ 2.09
KRT18-202ENST00000388837 SCAF1Q9H7N4 1312 aaKnown RBP28.12■■■□□ 2.09
KRT18-202ENST00000388837 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms