RNA–Protein interactions for RNA: ENST00000382227.7

TMEM41A-202, Transcript of transmembrane protein 41A, humanhuman

TSL 4

Gene TMEM41A, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-202ENST00000382227 PROSER2Q86WR7 435 aaPredicted RBP28.77■■■□□ 2.2
TMEM41A-202ENST00000382227 TMEM131LA2VDJ0 1609 aa28.76■■■□□ 2.2
TMEM41A-202ENST00000382227 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
TMEM41A-202ENST00000382227 RIMS2Q9UQ26 1411 aa28.76■■■□□ 2.19
TMEM41A-202ENST00000382227 PLEKHG1Q9ULL1 1385 aa28.75■■■□□ 2.19
TMEM41A-202ENST00000382227 NKTRP30414 1462 aaKnown RBP28.75■■■□□ 2.19
TMEM41A-202ENST00000382227 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
TMEM41A-202ENST00000382227 ITGAEP38570 1179 aa28.74■■■□□ 2.19
TMEM41A-202ENST00000382227 FAM135BQ49AJ0 1406 aa28.74■■■□□ 2.19
TMEM41A-202ENST00000382227 E9PCH4 1651 aa28.74■■■□□ 2.19
TMEM41A-202ENST00000382227 MYO5BQ9ULV0 1848 aa28.73■■■□□ 2.19
TMEM41A-202ENST00000382227 IQGAP3Q86VI3 1631 aa28.73■■■□□ 2.19
TMEM41A-202ENST00000382227 PPP1R15AO75807 674 aaPredicted RBP28.73■■■□□ 2.19
TMEM41A-202ENST00000382227 PHF23Q9BUL5 403 aaPredicted RBP28.73■■■□□ 2.19
TMEM41A-202ENST00000382227 RBM33Q96EV2 1170 aaKnown RBP28.72■■■□□ 2.19
TMEM41A-202ENST00000382227 PPARGC1BQ86YN6 1023 aaKnown RBP28.71■■■□□ 2.19
TMEM41A-202ENST00000382227 NUP155O75694 1391 aa28.71■■■□□ 2.19
TMEM41A-202ENST00000382227 CHGAP10645 457 aaKnown RBP28.7■■■□□ 2.18
TMEM41A-202ENST00000382227 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.69■■■□□ 2.18
TMEM41A-202ENST00000382227 TBX22Q9Y458 520 aa28.66■■■□□ 2.18
TMEM41A-202ENST00000382227 MSH6P52701 1360 aa28.64■■■□□ 2.18
TMEM41A-202ENST00000382227 CHD2O14647 1828 aaKnown RBP28.62■■■□□ 2.17
TMEM41A-202ENST00000382227 ROBO1Q9Y6N7 1651 aa28.61■■■□□ 2.17
TMEM41A-202ENST00000382227 NUTM2DQ5VT03 806 aaPredicted RBP28.61■■■□□ 2.17
TMEM41A-202ENST00000382227 ADAMTS13Q76LX8 1427 aa28.6■■■□□ 2.17
TMEM41A-202ENST00000382227 SLAIN2Q9P270 581 aa28.57■■■□□ 2.16
TMEM41A-202ENST00000382227 DIP2AQ14689 1571 aa28.57■■■□□ 2.16
TMEM41A-202ENST00000382227 NCOA3Q9Y6Q9 1424 aa28.55■■■□□ 2.16
TMEM41A-202ENST00000382227 PIK3R4Q99570 1358 aa28.54■■■□□ 2.16
TMEM41A-202ENST00000382227 RRBP1Q9P2E9 1410 aaKnown RBP28.52■■■□□ 2.16
TMEM41A-202ENST00000382227 RGS17Q9UGC6 210 aaPredicted RBP28.5■■■□□ 2.15
TMEM41A-202ENST00000382227 SPHKAPQ2M3C7 1700 aa28.49■■■□□ 2.15
TMEM41A-202ENST00000382227 C14orf37Q86TY3 774 aa28.49■■■□□ 2.15
TMEM41A-202ENST00000382227 TRPM2O94759 1503 aa28.48■■■□□ 2.15
TMEM41A-202ENST00000382227 C19orf44Q9H6X5 657 aa28.45■■■□□ 2.14
TMEM41A-202ENST00000382227 AMOTL2Q9Y2J4 779 aa28.45■■■□□ 2.14
TMEM41A-202ENST00000382227 NAIPQ13075 1403 aa28.44■■■□□ 2.14
TMEM41A-202ENST00000382227 PTPRUQ92729 1446 aa28.43■■■□□ 2.14
TMEM41A-202ENST00000382227 PHLPP1O60346 1717 aa28.43■■■□□ 2.14
TMEM41A-202ENST00000382227 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
TMEM41A-202ENST00000382227 CADPS2Q86UW7 1296 aa28.43■■■□□ 2.14
TMEM41A-202ENST00000382227 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
TMEM41A-202ENST00000382227 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.4■■■□□ 2.14
TMEM41A-202ENST00000382227 NRXN3Q9Y4C0 1643 aa28.4■■■□□ 2.14
TMEM41A-202ENST00000382227 JCADQ9P266 1359 aa28.4■■■□□ 2.14
TMEM41A-202ENST00000382227 ATF3P18847 181 aa28.4■■■□□ 2.14
TMEM41A-202ENST00000382227 CLTCL1P53675 1640 aa28.38■■■□□ 2.13
TMEM41A-202ENST00000382227 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
TMEM41A-202ENST00000382227 XRN1Q8IZH2 1706 aaKnown RBP28.35■■■□□ 2.13
TMEM41A-202ENST00000382227 POTEAQ6S8J7 498 aa28.34■■■□□ 2.13
TMEM41A-202ENST00000382227 METP08581 1390 aa28.34■■■□□ 2.13
TMEM41A-202ENST00000382227 NEXMIFQ5QGS0 1516 aa28.33■■■□□ 2.13
TMEM41A-202ENST00000382227 HFM1A2PYH4 1435 aa28.33■■■□□ 2.13
TMEM41A-202ENST00000382227 DCCP43146 1447 aa28.32■■■□□ 2.12
TMEM41A-202ENST00000382227 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
TMEM41A-202ENST00000382227 AHDC1Q5TGY3 1603 aaPredicted RBP28.31■■■□□ 2.12
TMEM41A-202ENST00000382227 BRINP3Q76B58 766 aa28.28■■■□□ 2.12
TMEM41A-202ENST00000382227 KIF1BO60333 1816 aa28.27■■■□□ 2.12
TMEM41A-202ENST00000382227 SPATA31A6Q5VVP1 1343 aa28.27■■■□□ 2.12
TMEM41A-202ENST00000382227 SLC4A1APQ9BWU0 796 aaKnown RBP28.24■■■□□ 2.11
TMEM41A-202ENST00000382227 LRP6O75581 1613 aa28.22■■■□□ 2.11
TMEM41A-202ENST00000382227 VGFO15240 615 aaPredicted RBP28.22■■■□□ 2.11
TMEM41A-202ENST00000382227 MST1RQ04912 1400 aa28.22■■■□□ 2.11
TMEM41A-202ENST00000382227 ADGRL3Q9HAR2 1447 aa28.21■■■□□ 2.11
TMEM41A-202ENST00000382227 SHPRHQ149N8 1683 aa28.2■■■□□ 2.11
TMEM41A-202ENST00000382227 ASXL1Q8IXJ9 1541 aa28.2■■■□□ 2.1
TMEM41A-202ENST00000382227 RPGRIP1LQ68CZ1 1315 aa28.18■■■□□ 2.1
TMEM41A-202ENST00000382227 MEX3CQ5U5Q3 659 aaKnown RBP28.18■■■□□ 2.1
TMEM41A-202ENST00000382227 NALCNQ8IZF0 1738 aa28.14■■■□□ 2.1
TMEM41A-202ENST00000382227 PTCH1Q13635 1447 aa28.13■■■□□ 2.09
TMEM41A-202ENST00000382227 SETD5Q9C0A6 1442 aa28.13■■■□□ 2.09
TMEM41A-202ENST00000382227 SETD1AO15047 1707 aaKnown RBP28.12■■■□□ 2.09
TMEM41A-202ENST00000382227 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
TMEM41A-202ENST00000382227 ZNF772Q68DY9 489 aaPredicted RBP28.11■■■□□ 2.09
TMEM41A-202ENST00000382227 FOXD1Q16676 465 aa28.1■■■□□ 2.09
TMEM41A-202ENST00000382227 ROBO2Q9HCK4 1378 aa28.1■■■□□ 2.09
TMEM41A-202ENST00000382227 LRRC59Q96AG4 307 aaKnown RBP28.09■■■□□ 2.09
TMEM41A-202ENST00000382227 PPLO60437 1756 aa28.09■■■□□ 2.09
TMEM41A-202ENST00000382227 PRAG1Q86YV5 1406 aa28.09■■■□□ 2.09
TMEM41A-202ENST00000382227 NUTM2BA6NNL0 878 aaPredicted RBP28.08■■■□□ 2.09
TMEM41A-202ENST00000382227 NUTM2EB1AL46 878 aaPredicted RBP28.08■■■□□ 2.09
TMEM41A-202ENST00000382227 NUTM2AQ8IVF1 878 aaPredicted RBP28.08■■■□□ 2.09
TMEM41A-202ENST00000382227 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
TMEM41A-202ENST00000382227 C1orf167Q5SNV9 1468 aa28.06■■■□□ 2.08
TMEM41A-202ENST00000382227 CCDC144AA2RUR9 1427 aa28.04■■■□□ 2.08
TMEM41A-202ENST00000382227 MPHOSPH9Q99550 1183 aa28.02■■■□□ 2.08
TMEM41A-202ENST00000382227 PNPLA6Q8IY17 1366 aa28■■■□□ 2.07
TMEM41A-202ENST00000382227 ADGRF5Q8IZF2 1346 aa27.99■■■□□ 2.07
TMEM41A-202ENST00000382227 SPATA31E1Q6ZUB1 1445 aa27.99■■■□□ 2.07
TMEM41A-202ENST00000382227 RGL3Q3MIN7 710 aa27.98■■■□□ 2.07
TMEM41A-202ENST00000382227 ORAI2Q96SN7 254 aa27.98■■■□□ 2.07
TMEM41A-202ENST00000382227 LAMC1P11047 1609 aa27.97■■■□□ 2.07
TMEM41A-202ENST00000382227 AFF2P51816 1311 aa27.96■■■□□ 2.07
TMEM41A-202ENST00000382227 RXRBP28702 533 aa27.96■■■□□ 2.07
TMEM41A-202ENST00000382227 ANKRD30BQ9BXX2 1392 aa27.96■■■□□ 2.07
TMEM41A-202ENST00000382227 SOS2Q07890 1332 aaPredicted RBP27.93■■■□□ 2.06
TMEM41A-202ENST00000382227 C8orf37Q96NL8 207 aa27.92■■■□□ 2.06
TMEM41A-202ENST00000382227 ACIN1Q9UKV3 1341 aaKnown RBP27.91■■■□□ 2.06
TMEM41A-202ENST00000382227 CDC42BPGQ6DT37 1551 aa27.9■■■□□ 2.06
TMEM41A-202ENST00000382227 IFT172Q9UG01 1749 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms