RNA–Protein interactions for RNA: ENST00000380725.1

CDKN1C-201, Transcript of cyclin dependent kinase inhibitor 1C, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDKN1C, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1C-201ENST00000380725 RIMS2Q9UQ26 1411 aa26.73■■□□□ 1.87
CDKN1C-201ENST00000380725 PPP1R15AO75807 674 aaPredicted RBP26.72■■□□□ 1.87
CDKN1C-201ENST00000380725 SPHKAPQ2M3C7 1700 aa26.71■■□□□ 1.87
CDKN1C-201ENST00000380725 ZFYVE9O95405 1425 aa26.71■■□□□ 1.87
CDKN1C-201ENST00000380725 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.7■■□□□ 1.86
CDKN1C-201ENST00000380725 TOM1O60784 492 aa26.69■■□□□ 1.86
CDKN1C-201ENST00000380725 LRRC7Q96NW7 1537 aa26.68■■□□□ 1.86
CDKN1C-201ENST00000380725 NUTM2DQ5VT03 806 aaPredicted RBP26.67■■□□□ 1.86
CDKN1C-201ENST00000380725 SLC4A1APQ9BWU0 796 aaKnown RBP26.67■■□□□ 1.86
CDKN1C-201ENST00000380725 KCNA6P17658 529 aa26.65■■□□□ 1.86
CDKN1C-201ENST00000380725 PLEKHG1Q9ULL1 1385 aa26.65■■□□□ 1.86
CDKN1C-201ENST00000380725 PIP4K2BP78356 416 aa26.63■■□□□ 1.85
CDKN1C-201ENST00000380725 SCAF1Q9H7N4 1312 aaKnown RBP26.63■■□□□ 1.85
CDKN1C-201ENST00000380725 ZNF326Q5BKZ1 582 aaKnown RBP26.61■■□□□ 1.85
CDKN1C-201ENST00000380725 PROSER2Q86WR7 435 aaPredicted RBP26.59■■□□□ 1.85
CDKN1C-201ENST00000380725 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
CDKN1C-201ENST00000380725 TRPM2O94759 1503 aa26.58■■□□□ 1.85
CDKN1C-201ENST00000380725 CLTCL1P53675 1640 aa26.57■■□□□ 1.84
CDKN1C-201ENST00000380725 KIF1BO60333 1816 aa26.57■■□□□ 1.84
CDKN1C-201ENST00000380725 XIRP1Q702N8 1843 aaKnown RBP26.56■■□□□ 1.84
CDKN1C-201ENST00000380725 CHD2O14647 1828 aaKnown RBP26.55■■□□□ 1.84
CDKN1C-201ENST00000380725 FOXD1Q16676 465 aa26.54■■□□□ 1.84
CDKN1C-201ENST00000380725 MPHOSPH9Q99550 1183 aa26.54■■□□□ 1.84
CDKN1C-201ENST00000380725 SETD5Q9C0A6 1442 aa26.54■■□□□ 1.84
CDKN1C-201ENST00000380725 TMEM94Q12767 1356 aa26.52■■□□□ 1.84
CDKN1C-201ENST00000380725 RBM33Q96EV2 1170 aaKnown RBP26.52■■□□□ 1.84
CDKN1C-201ENST00000380725 ACIN1Q9UKV3 1341 aaKnown RBP26.52■■□□□ 1.84
CDKN1C-201ENST00000380725 ALKQ9UM73 1620 aa26.51■■□□□ 1.83
CDKN1C-201ENST00000380725 ADAMTS13Q76LX8 1427 aa26.51■■□□□ 1.83
CDKN1C-201ENST00000380725 NWD1Q149M9 1564 aa26.49■■□□□ 1.83
CDKN1C-201ENST00000380725 HSPA1LP34931 641 aa26.48■■□□□ 1.83
CDKN1C-201ENST00000380725 NKTRP30414 1462 aaKnown RBP26.47■■□□□ 1.83
CDKN1C-201ENST00000380725 DIP2AQ14689 1571 aa26.46■■□□□ 1.83
CDKN1C-201ENST00000380725 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
CDKN1C-201ENST00000380725 NEXMIFQ5QGS0 1516 aa26.43■■□□□ 1.82
CDKN1C-201ENST00000380725 VGFO15240 615 aaPredicted RBP26.42■■□□□ 1.82
CDKN1C-201ENST00000380725 AMOTL2Q9Y2J4 779 aa26.42■■□□□ 1.82
CDKN1C-201ENST00000380725 RAB3GAP2Q9H2M9 1393 aa26.42■■□□□ 1.82
CDKN1C-201ENST00000380725 RPGRIP1LQ68CZ1 1315 aa26.41■■□□□ 1.82
CDKN1C-201ENST00000380725 SETBP1Q9Y6X0 1596 aa26.4■■□□□ 1.82
CDKN1C-201ENST00000380725 NRXN3Q9Y4C0 1643 aa26.39■■□□□ 1.82
CDKN1C-201ENST00000380725 CCDC144AA2RUR9 1427 aa26.39■■□□□ 1.81
CDKN1C-201ENST00000380725 MSH6P52701 1360 aa26.38■■□□□ 1.81
CDKN1C-201ENST00000380725 PTPRUQ92729 1446 aa26.37■■□□□ 1.81
CDKN1C-201ENST00000380725 C14orf37Q86TY3 774 aa26.36■■□□□ 1.81
CDKN1C-201ENST00000380725 RGL3Q3MIN7 710 aa26.35■■□□□ 1.81
CDKN1C-201ENST00000380725 METP08581 1390 aa26.34■■□□□ 1.81
CDKN1C-201ENST00000380725 DISP3Q9P2K9 1392 aa26.34■■□□□ 1.81
CDKN1C-201ENST00000380725 NCOA3Q9Y6Q9 1424 aa26.34■■□□□ 1.81
CDKN1C-201ENST00000380725 PPLO60437 1756 aa26.33■■□□□ 1.8
CDKN1C-201ENST00000380725 SLAIN2Q9P270 581 aa26.32■■□□□ 1.8
CDKN1C-201ENST00000380725 FAM135BQ49AJ0 1406 aa26.31■■□□□ 1.8
CDKN1C-201ENST00000380725 HRCP23327 699 aa26.31■■□□□ 1.8
CDKN1C-201ENST00000380725 C19orf44Q9H6X5 657 aa26.3■■□□□ 1.8
CDKN1C-201ENST00000380725 SPATA31E1Q6ZUB1 1445 aa26.28■■□□□ 1.8
CDKN1C-201ENST00000380725 XRN1Q8IZH2 1706 aaKnown RBP26.27■■□□□ 1.8
CDKN1C-201ENST00000380725 ATF3P18847 181 aa26.26■■□□□ 1.79
CDKN1C-201ENST00000380725 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.25■■□□□ 1.79
CDKN1C-201ENST00000380725 ROBO1Q9Y6N7 1651 aa26.25■■□□□ 1.79
CDKN1C-201ENST00000380725 ADGRF5Q8IZF2 1346 aa26.24■■□□□ 1.79
CDKN1C-201ENST00000380725 CADPS2Q86UW7 1296 aa26.24■■□□□ 1.79
CDKN1C-201ENST00000380725 ANKRD30BQ9BXX2 1392 aa26.22■■□□□ 1.79
CDKN1C-201ENST00000380725 SETD1AO15047 1707 aaKnown RBP26.21■■□□□ 1.79
CDKN1C-201ENST00000380725 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
CDKN1C-201ENST00000380725 ILDR2Q71H61 639 aa26.13■■□□□ 1.77
CDKN1C-201ENST00000380725 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
CDKN1C-201ENST00000380725 ROBO2Q9HCK4 1378 aa26.12■■□□□ 1.77
CDKN1C-201ENST00000380725 DCCP43146 1447 aa26.12■■□□□ 1.77
CDKN1C-201ENST00000380725 PHLPP1O60346 1717 aa26.11■■□□□ 1.77
CDKN1C-201ENST00000380725 TMEM132EQ6IEE7 984 aa26.1■■□□□ 1.77
CDKN1C-201ENST00000380725 PTCH1Q13635 1447 aa26.1■■□□□ 1.77
CDKN1C-201ENST00000380725 ADGRL3Q9HAR2 1447 aa26.1■■□□□ 1.77
CDKN1C-201ENST00000380725 STK26Q9P289 416 aa26.09■■□□□ 1.77
CDKN1C-201ENST00000380725 PIK3C2GO75747 1445 aa26.07■■□□□ 1.76
CDKN1C-201ENST00000380725 C14orf93Q9H972 538 aaKnown RBP26.07■■□□□ 1.76
CDKN1C-201ENST00000380725 NALCNQ8IZF0 1738 aa26.07■■□□□ 1.76
CDKN1C-201ENST00000380725 BRINP3Q76B58 766 aa26.06■■□□□ 1.76
CDKN1C-201ENST00000380725 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
CDKN1C-201ENST00000380725 MST1RQ04912 1400 aa26.05■■□□□ 1.76
CDKN1C-201ENST00000380725 CFAP70Q5T0N1 1121 aa26.04■■□□□ 1.76
CDKN1C-201ENST00000380725 KDM2AQ9Y2K7 1162 aa26.03■■□□□ 1.76
CDKN1C-201ENST00000380725 LRPPRCP42704 1394 aaKnown RBP26.03■■□□□ 1.76
CDKN1C-201ENST00000380725 MYOM2P54296 1465 aa26.03■■□□□ 1.76
CDKN1C-201ENST00000380725 DCAF11Q8TEB1 546 aa26.02■■□□□ 1.76
CDKN1C-201ENST00000380725 ABCC11Q96J66 1382 aa26.02■■□□□ 1.76
CDKN1C-201ENST00000380725 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
CDKN1C-201ENST00000380725 WAPLQ7Z5K2 1190 aa26.01■■□□□ 1.75
CDKN1C-201ENST00000380725 JCADQ9P266 1359 aa25.99■■□□□ 1.75
CDKN1C-201ENST00000380725 COL16A1Q07092 1604 aaPredicted RBP25.99■■□□□ 1.75
CDKN1C-201ENST00000380725 AHDC1Q5TGY3 1603 aaPredicted RBP25.99■■□□□ 1.75
CDKN1C-201ENST00000380725 ASXL1Q8IXJ9 1541 aa25.98■■□□□ 1.75
CDKN1C-201ENST00000380725 YTHDC2Q9H6S0 1430 aaKnown RBP25.98■■□□□ 1.75
CDKN1C-201ENST00000380725 TECPR2O15040 1411 aa25.97■■□□□ 1.75
CDKN1C-201ENST00000380725 DHX57Q6P158 1386 aaKnown RBP25.97■■□□□ 1.75
CDKN1C-201ENST00000380725 STAC3Q96MF2 364 aa25.97■■□□□ 1.75
CDKN1C-201ENST00000380725 C1orf167Q5SNV9 1468 aa25.96■■□□□ 1.75
CDKN1C-201ENST00000380725 SOCS7O14512 581 aa25.95■■□□□ 1.74
CDKN1C-201ENST00000380725 SIRT1Q96EB6 747 aa25.95■■□□□ 1.74
CDKN1C-201ENST00000380725 LAMC1P11047 1609 aa25.95■■□□□ 1.74
CDKN1C-201ENST00000380725 KNDC1Q76NI1 1749 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms