RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
COL2A1-202ENST00000380518 C9orf78Q9NZ63 289 aaPredicted RBP19.68■□□□□ 0.74
COL2A1-202ENST00000380518 CCDC7Q96M83 1385 aa19.68■□□□□ 0.74
COL2A1-202ENST00000380518 BECN2A8MW95 431 aa19.68■□□□□ 0.74
COL2A1-202ENST00000380518 CPLX2Q6PUV4 134 aaKnown RBP19.68■□□□□ 0.74
COL2A1-202ENST00000380518 MARCH6O60337 910 aa19.67■□□□□ 0.74
COL2A1-202ENST00000380518 SMARCA4P51532 1647 aa19.66■□□□□ 0.74
COL2A1-202ENST00000380518 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
COL2A1-202ENST00000380518 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
COL2A1-202ENST00000380518 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
COL2A1-202ENST00000380518 CHMP5Q9NZZ3 219 aa19.66■□□□□ 0.74
COL2A1-202ENST00000380518 AKAP17AQ02040 695 aaKnown RBP19.65■□□□□ 0.74
COL2A1-202ENST00000380518 FOXD4L6Q3SYB3 417 aaPredicted RBP19.65■□□□□ 0.74
COL2A1-202ENST00000380518 FOXD4L3Q6VB84 417 aaPredicted RBP19.65■□□□□ 0.74
COL2A1-202ENST00000380518 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
COL2A1-202ENST00000380518 TTC5Q8N0Z6 440 aa19.65■□□□□ 0.74
COL2A1-202ENST00000380518 IGF1RP08069 1367 aa19.65■□□□□ 0.74
COL2A1-202ENST00000380518 AAMPQ13685 434 aa19.64■□□□□ 0.73
COL2A1-202ENST00000380518 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
COL2A1-202ENST00000380518 SYNE3Q6ZMZ3 975 aa19.64■□□□□ 0.73
COL2A1-202ENST00000380518 TNNT3P45378 269 aaPredicted RBP19.63■□□□□ 0.73
COL2A1-202ENST00000380518 TPD52L1Q16890 204 aaPredicted RBP19.63■□□□□ 0.73
COL2A1-202ENST00000380518 IFIT2P09913 472 aaKnown RBP19.63■□□□□ 0.73
COL2A1-202ENST00000380518 GNAI1P63096 354 aa19.62■□□□□ 0.73
COL2A1-202ENST00000380518 RSPH6AQ9H0K4 717 aa19.62■□□□□ 0.73
COL2A1-202ENST00000380518 TSR1Q2NL82 804 aaKnown RBP19.62■□□□□ 0.73
COL2A1-202ENST00000380518 MCTP1Q6DN14 999 aa19.62■□□□□ 0.73
COL2A1-202ENST00000380518 A0A0U1RQG5 324 aaPredicted RBP19.62■□□□□ 0.73
COL2A1-202ENST00000380518 DDX58O95786 925 aaKnown RBP19.62■□□□□ 0.73
COL2A1-202ENST00000380518 CEP89Q96ST8 783 aa19.62■□□□□ 0.73
COL2A1-202ENST00000380518 FKBP5Q13451 457 aaPredicted RBP19.61■□□□□ 0.73
COL2A1-202ENST00000380518 PES1O00541 588 aaKnown RBP19.61■□□□□ 0.73
COL2A1-202ENST00000380518 CNTLNQ9NXG0 1405 aa19.6■□□□□ 0.73
COL2A1-202ENST00000380518 RNF20Q5VTR2 975 aa19.6■□□□□ 0.73
COL2A1-202ENST00000380518 ANO2Q9NQ90 1003 aa19.6■□□□□ 0.73
COL2A1-202ENST00000380518 MIA2Q96PC5 1412 aa19.59■□□□□ 0.73
COL2A1-202ENST00000380518 HSP90AA2PQ14568 343 aaPredicted RBP19.59■□□□□ 0.73
COL2A1-202ENST00000380518 TPM1P09493 284 aa19.59■□□□□ 0.73
COL2A1-202ENST00000380518 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
COL2A1-202ENST00000380518 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
COL2A1-202ENST00000380518 HSP90AB4PQ58FF6 505 aa19.58■□□□□ 0.72
COL2A1-202ENST00000380518 VPS53Q5VIR6 699 aa19.58■□□□□ 0.72
COL2A1-202ENST00000380518 ZNF644Q9H582 1327 aaPredicted RBP19.57■□□□□ 0.72
COL2A1-202ENST00000380518 CUX1P39880 1505 aa19.57■□□□□ 0.72
COL2A1-202ENST00000380518 G3BP1Q13283 466 aaKnown RBP eCLIP19.57■□□□□ 0.72
COL2A1-202ENST00000380518 EVA1CP58658 441 aa19.57■□□□□ 0.72
COL2A1-202ENST00000380518 CPLX1O14810 134 aa19.57■□□□□ 0.72
COL2A1-202ENST00000380518 NUCB2P80303 420 aa19.57■□□□□ 0.72
COL2A1-202ENST00000380518 TRIM29Q14134 588 aa19.57■□□□□ 0.72
COL2A1-202ENST00000380518 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL2A1-202ENST00000380518 NECTIN2Q92692 538 aa19.56■□□□□ 0.72
COL2A1-202ENST00000380518 LNPKQ9C0E8 428 aa19.56■□□□□ 0.72
COL2A1-202ENST00000380518 FGD5Q6ZNL6 1462 aa19.55■□□□□ 0.72
COL2A1-202ENST00000380518 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
COL2A1-202ENST00000380518 ANKRD50Q9ULJ7 1429 aa19.55■□□□□ 0.72
COL2A1-202ENST00000380518 TPM2P07951 284 aa19.54■□□□□ 0.72
COL2A1-202ENST00000380518 C22orf23Q9BZE7 217 aa19.54■□□□□ 0.72
COL2A1-202ENST00000380518 TSPYL4Q9UJ04 414 aa19.54■□□□□ 0.72
COL2A1-202ENST00000380518 TRDNQ13061 729 aa19.53■□□□□ 0.72
COL2A1-202ENST00000380518 PDE4CQ08493 712 aa19.53■□□□□ 0.72
COL2A1-202ENST00000380518 PSME1Q06323 249 aa19.53■□□□□ 0.72
COL2A1-202ENST00000380518 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
COL2A1-202ENST00000380518 ERC2O15083 957 aa19.52■□□□□ 0.72
COL2A1-202ENST00000380518 APPP05067 770 aa19.52■□□□□ 0.72
COL2A1-202ENST00000380518 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.72
COL2A1-202ENST00000380518 SMC3Q9UQE7 1217 aa19.52■□□□□ 0.72
COL2A1-202ENST00000380518 CCAR2Q8N163 923 aaKnown RBP19.52■□□□□ 0.71
COL2A1-202ENST00000380518 GGNBP2Q9H3C7 697 aa19.52■□□□□ 0.71
COL2A1-202ENST00000380518 LRRC9Q6ZRR7 1453 aa19.51■□□□□ 0.71
COL2A1-202ENST00000380518 PANK1Q8TE04 598 aa19.51■□□□□ 0.71
COL2A1-202ENST00000380518 HMOX1P09601 288 aa19.51■□□□□ 0.71
COL2A1-202ENST00000380518 NOL10Q9BSC4 688 aaKnown RBP19.51■□□□□ 0.71
COL2A1-202ENST00000380518 VPS37CA5D8V6 355 aaPredicted RBP19.5■□□□□ 0.71
COL2A1-202ENST00000380518 CYB5RLQ6IPT4 315 aa19.5■□□□□ 0.71
COL2A1-202ENST00000380518 WASHC2AQ641Q2 1341 aa19.5■□□□□ 0.71
COL2A1-202ENST00000380518 ADAMTS8Q9UP79 889 aa19.5■□□□□ 0.71
COL2A1-202ENST00000380518 IPO7O95373 1038 aaKnown RBP19.49■□□□□ 0.71
COL2A1-202ENST00000380518 ANKRD20A12PQ8NF67 263 aa19.49■□□□□ 0.71
COL2A1-202ENST00000380518 CCDC47Q96A33 483 aaKnown RBP19.48■□□□□ 0.71
COL2A1-202ENST00000380518 HOOK1Q9UJC3 728 aaKnown RBP19.48■□□□□ 0.71
COL2A1-202ENST00000380518 CDC45O75419 566 aa19.48■□□□□ 0.71
COL2A1-202ENST00000380518 GPS2Q13227 327 aa19.48■□□□□ 0.71
COL2A1-202ENST00000380518 KIF21BO75037 1637 aa19.48■□□□□ 0.71
COL2A1-202ENST00000380518 CCDC70Q6NSX1 233 aa19.48■□□□□ 0.71
COL2A1-202ENST00000380518 OSCARQ8IYS5 282 aa19.47■□□□□ 0.71
COL2A1-202ENST00000380518 FYCO1Q9BQS8 1478 aa19.47■□□□□ 0.71
COL2A1-202ENST00000380518 MTHFSP49914 203 aa19.46■□□□□ 0.71
COL2A1-202ENST00000380518 RAPGEF4Q8WZA2 1011 aa19.46■□□□□ 0.71
COL2A1-202ENST00000380518 ZNF592Q92610 1267 aa19.46■□□□□ 0.71
COL2A1-202ENST00000380518 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
COL2A1-202ENST00000380518 TCP11L2Q8N4U5 519 aa19.46■□□□□ 0.71
COL2A1-202ENST00000380518 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
COL2A1-202ENST00000380518 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
COL2A1-202ENST00000380518 NCOA2Q15596 1464 aa19.45■□□□□ 0.7
COL2A1-202ENST00000380518 UBTFL1P0CB47 393 aaPredicted RBP19.44■□□□□ 0.7
COL2A1-202ENST00000380518 VPS37DQ86XT2 251 aa19.44■□□□□ 0.7
COL2A1-202ENST00000380518 SASS6Q6UVJ0 657 aa19.44■□□□□ 0.7
COL2A1-202ENST00000380518 CCDC73Q6ZRK6 1079 aa19.44■□□□□ 0.7
COL2A1-202ENST00000380518 NFKBIBQ15653 356 aa19.43■□□□□ 0.7
COL2A1-202ENST00000380518 NFXL1Q6ZNB6 911 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms