RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 CHGAP10645 457 aaKnown RBP8.38□□□□□ -1.07
RIPK1-202ENST00000380409 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
RIPK1-202ENST00000380409 PLCB2Q00722 1185 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 TAF3Q5VWG9 929 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 PRDM10Q9NQV6 1147 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 LRRIQ1Q96JM4 1722 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 MIA2Q96PC5 1412 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 MLECQ14165 292 aa8.37□□□□□ -1.07
RIPK1-202ENST00000380409 KIF14Q15058 1648 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
RIPK1-202ENST00000380409 ZMYM3Q14202 1370 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 FHOD3Q2V2M9 1422 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 MCM4P33991 863 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 ZSCAN30Q86W11 494 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 MYH16Q9H6N6 1097 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 KIF7Q2M1P5 1343 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 KIAA1107Q9UPP5 1409 aa8.36□□□□□ -1.07
RIPK1-202ENST00000380409 RIMBP3CA6NJZ7 1639 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 RIMBP3BA6NNM3 1639 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 RIMBP3Q9UFD9 1639 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 VGLL3A8MV65 326 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 DDIT3P35638 169 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 EIF4G2P78344 907 aaKnown RBP eCLIP8.35□□□□□ -1.07
RIPK1-202ENST00000380409 IBTKQ9P2D0 1353 aaPredicted RBP8.35□□□□□ -1.07
RIPK1-202ENST00000380409 PTPRKQ15262 1439 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 RCAN3Q9UKA8 241 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 NAIPQ13075 1403 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 PLEKHH2Q8IVE3 1493 aa8.35□□□□□ -1.07
RIPK1-202ENST00000380409 ZNF692Q9BU19 519 aaPredicted RBP8.35□□□□□ -1.07
RIPK1-202ENST00000380409 HS1BP3Q53T59 392 aa8.34□□□□□ -1.07
RIPK1-202ENST00000380409 CARMIL2Q6F5E8 1435 aa8.34□□□□□ -1.07
RIPK1-202ENST00000380409 CENPQQ7L2Z9 268 aaPredicted RBP8.34□□□□□ -1.07
RIPK1-202ENST00000380409 GAS2L3Q86XJ1 694 aa8.34□□□□□ -1.07
RIPK1-202ENST00000380409 CLASP1Q7Z460 1538 aa8.34□□□□□ -1.07
RIPK1-202ENST00000380409 KDM6BO15054 1643 aa8.34□□□□□ -1.07
RIPK1-202ENST00000380409 FAM13BQ9NYF5 915 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 BCCIPQ9P287 314 aaKnown RBP eCLIP8.33□□□□□ -1.08
RIPK1-202ENST00000380409 CEP170Q5SW79 1584 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 UQCRHLA0A096LP55 91 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 UQCRHP07919 91 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 CCDC173Q0VFZ6 552 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 PLCD3Q8N3E9 789 aa8.33□□□□□ -1.08
RIPK1-202ENST00000380409 PBRM1Q86U86 1689 aa8.32□□□□□ -1.08
RIPK1-202ENST00000380409 GTF2F1P35269 517 aaKnown RBP eCLIP8.32□□□□□ -1.08
RIPK1-202ENST00000380409 PSEN1P49768 467 aa8.32□□□□□ -1.08
RIPK1-202ENST00000380409 IRX5P78411 483 aaPredicted RBP8.32□□□□□ -1.08
RIPK1-202ENST00000380409 TRAK2O60296 914 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 ANP32BQ92688 251 aaKnown RBP8.31□□□□□ -1.08
RIPK1-202ENST00000380409 BRD4O60885 1362 aaPredicted RBP8.31□□□□□ -1.08
RIPK1-202ENST00000380409 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 PDE3BQ13370 1112 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 PDLIM2Q96JY6 352 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 NOL7Q9UMY1 257 aaKnown RBP8.31□□□□□ -1.08
RIPK1-202ENST00000380409 CFAP65Q6ZU64 1925 aaKnown RBP8.31□□□□□ -1.08
RIPK1-202ENST00000380409 CRBNQ96SW2 442 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 ADAMTS12P58397 1594 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 PLB1Q6P1J6 1458 aa8.31□□□□□ -1.08
RIPK1-202ENST00000380409 ZBTB22O15209 634 aa8.3□□□□□ -1.08
RIPK1-202ENST00000380409 TULP2O00295 520 aa8.3□□□□□ -1.08
RIPK1-202ENST00000380409 TSPY4P0CV99 314 aa8.3□□□□□ -1.08
RIPK1-202ENST00000380409 TSPY10P0CW01 314 aa8.3□□□□□ -1.08
RIPK1-202ENST00000380409 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
RIPK1-202ENST00000380409 RPRD2Q5VT52 1461 aaKnown RBP8.3□□□□□ -1.08
RIPK1-202ENST00000380409 CNPY4Q8N129 248 aa8.29□□□□□ -1.08
RIPK1-202ENST00000380409 ATP2B3Q16720 1220 aa8.29□□□□□ -1.08
RIPK1-202ENST00000380409 SLC52A1Q9NWF4 448 aa8.29□□□□□ -1.08
RIPK1-202ENST00000380409 EIF3AQ14152 1382 aaKnown RBP8.29□□□□□ -1.08
RIPK1-202ENST00000380409 RAPGEF3O95398 923 aa8.29□□□□□ -1.08
RIPK1-202ENST00000380409 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
RIPK1-202ENST00000380409 FGD6Q6ZV73 1430 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 SOX12O15370 315 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 SEC24BO95487 1268 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 HSP90AB1P08238 724 aaKnown RBP8.28□□□□□ -1.08
RIPK1-202ENST00000380409 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 SASS6Q6UVJ0 657 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 YY1AP1Q9H869 796 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 KIAA0586Q9BVV6 1533 aa8.28□□□□□ -1.08
RIPK1-202ENST00000380409 IRX3P78415 501 aaPredicted RBP8.28□□□□□ -1.08
RIPK1-202ENST00000380409 R3HCC1Q9Y3T6 440 aaKnown RBP8.27□□□□□ -1.09
RIPK1-202ENST00000380409 NUP160Q12769 1436 aa8.27□□□□□ -1.09
RIPK1-202ENST00000380409 TRIM44Q96DX7 344 aaPredicted RBP8.27□□□□□ -1.09
RIPK1-202ENST00000380409 TBC1D32Q96NH3 1257 aa8.27□□□□□ -1.09
RIPK1-202ENST00000380409 CCDC9Q9Y3X0 531 aaKnown RBP8.27□□□□□ -1.09
RIPK1-202ENST00000380409 FYCO1Q9BQS8 1478 aa8.27□□□□□ -1.09
RIPK1-202ENST00000380409 EPRSP07814 1512 aaKnown RBP8.27□□□□□ -1.09
RIPK1-202ENST00000380409 BECN1Q14457 450 aa8.27□□□□□ -1.09
RIPK1-202ENST00000380409 CFDP1Q9UEE9 299 aaPredicted RBP8.27□□□□□ -1.09
RIPK1-202ENST00000380409 FMN1Q68DA7 1419 aa8.26□□□□□ -1.09
RIPK1-202ENST00000380409 TMED8Q6PL24 325 aaPredicted RBP8.26□□□□□ -1.09
RIPK1-202ENST00000380409 SLKQ9H2G2 1235 aaPredicted RBP8.26□□□□□ -1.09
RIPK1-202ENST00000380409 DDX11L8A8MPP1 907 aa8.26□□□□□ -1.09
RIPK1-202ENST00000380409 MYRIPQ8NFW9 859 aa8.26□□□□□ -1.09
RIPK1-202ENST00000380409 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
RIPK1-202ENST00000380409 PANK3Q9H999 370 aa8.25□□□□□ -1.09
RIPK1-202ENST00000380409 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
RIPK1-202ENST00000380409 MCM5P33992 734 aa8.25□□□□□ -1.09
RIPK1-202ENST00000380409 CAPN2P17655 700 aa8.24□□□□□ -1.09
RIPK1-202ENST00000380409 TNNT2P45379 298 aaPredicted RBP8.24□□□□□ -1.09
RIPK1-202ENST00000380409 GZF1Q9H116 711 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms