RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ANKRD30BQ9BXX2 1392 aa17.46■□□□□ 0.39
PCNA-201ENST00000379143 TMEM2Q9UHN6 1383 aa17.46■□□□□ 0.39
PCNA-201ENST00000379143 HDGFP51858 240 aaKnown RBP17.46■□□□□ 0.38
PCNA-201ENST00000379143 POLR1AO95602 1720 aaPredicted RBP17.45■□□□□ 0.38
PCNA-201ENST00000379143 EID1Q9Y6B2 187 aa17.45■□□□□ 0.38
PCNA-201ENST00000379143 MYO5BQ9ULV0 1848 aa17.45■□□□□ 0.38
PCNA-201ENST00000379143 DHX57Q6P158 1386 aaKnown RBP17.43■□□□□ 0.38
PCNA-201ENST00000379143 NEURL4Q96JN8 1562 aa17.43■□□□□ 0.38
PCNA-201ENST00000379143 SCAF11Q99590 1463 aaKnown RBP17.42■□□□□ 0.38
PCNA-201ENST00000379143 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCNA-201ENST00000379143 MED14O60244 1454 aa17.41■□□□□ 0.38
PCNA-201ENST00000379143 NCKAP5LQ9HCH0 1330 aa17.41■□□□□ 0.38
PCNA-201ENST00000379143 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
PCNA-201ENST00000379143 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
PCNA-201ENST00000379143 ZFYVE9O95405 1425 aa17.4■□□□□ 0.38
PCNA-201ENST00000379143 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
PCNA-201ENST00000379143 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
PCNA-201ENST00000379143 ZNF335Q9H4Z2 1342 aaPredicted RBP17.38■□□□□ 0.37
PCNA-201ENST00000379143 LTKP29376 864 aa17.38■□□□□ 0.37
PCNA-201ENST00000379143 NPHP4O75161 1426 aaPredicted RBP17.37■□□□□ 0.37
PCNA-201ENST00000379143 SPATA31E1Q6ZUB1 1445 aa17.37■□□□□ 0.37
PCNA-201ENST00000379143 PPP1R15AO75807 674 aaPredicted RBP17.37■□□□□ 0.37
PCNA-201ENST00000379143 NEXMIFQ5QGS0 1516 aa17.36■□□□□ 0.37
PCNA-201ENST00000379143 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
PCNA-201ENST00000379143 UBAP1LF5GYI3 381 aa17.34■□□□□ 0.37
PCNA-201ENST00000379143 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
PCNA-201ENST00000379143 VGFO15240 615 aaPredicted RBP17.33■□□□□ 0.36
PCNA-201ENST00000379143 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
PCNA-201ENST00000379143 PPLO60437 1756 aa17.32■□□□□ 0.36
PCNA-201ENST00000379143 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
PCNA-201ENST00000379143 BCANQ96GW7 911 aa17.3■□□□□ 0.36
PCNA-201ENST00000379143 NUTM2DQ5VT03 806 aaPredicted RBP17.29■□□□□ 0.36
PCNA-201ENST00000379143 STAC3Q96MF2 364 aa17.29■□□□□ 0.36
PCNA-201ENST00000379143 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
PCNA-201ENST00000379143 DIP2AQ14689 1571 aa17.28■□□□□ 0.36
PCNA-201ENST00000379143 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.36
PCNA-201ENST00000379143 MED1Q15648 1581 aaPredicted RBP17.26■□□□□ 0.35
PCNA-201ENST00000379143 MYOM2P54296 1465 aa17.26■□□□□ 0.35
PCNA-201ENST00000379143 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
PCNA-201ENST00000379143 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
PCNA-201ENST00000379143 NEUROD1Q13562 356 aa17.24■□□□□ 0.35
PCNA-201ENST00000379143 SLC26A8Q96RN1 970 aa17.24■□□□□ 0.35
PCNA-201ENST00000379143 DCAF11Q8TEB1 546 aa17.23■□□□□ 0.35
PCNA-201ENST00000379143 NRXN3Q9Y4C0 1643 aa17.23■□□□□ 0.35
PCNA-201ENST00000379143 ADAMTS13Q76LX8 1427 aa17.23■□□□□ 0.35
PCNA-201ENST00000379143 MSH5O43196 834 aa17.22■□□□□ 0.35
PCNA-201ENST00000379143 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
PCNA-201ENST00000379143 ADGRF5Q8IZF2 1346 aa17.22■□□□□ 0.35
PCNA-201ENST00000379143 PIK3R4Q99570 1358 aa17.22■□□□□ 0.35
PCNA-201ENST00000379143 NRXN1Q9ULB1 1477 aa17.22■□□□□ 0.35
PCNA-201ENST00000379143 CPS1P31327 1500 aa17.21■□□□□ 0.35
PCNA-201ENST00000379143 PIK3C2GO75747 1445 aa17.2■□□□□ 0.34
PCNA-201ENST00000379143 HSPA1LP34931 641 aa17.2■□□□□ 0.34
PCNA-201ENST00000379143 KDM2AQ9Y2K7 1162 aa17.2■□□□□ 0.34
PCNA-201ENST00000379143 LAMC1P11047 1609 aa17.19■□□□□ 0.34
PCNA-201ENST00000379143 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
PCNA-201ENST00000379143 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
PCNA-201ENST00000379143 KCNA6P17658 529 aa17.18■□□□□ 0.34
PCNA-201ENST00000379143 L3MBTL2Q969R5 705 aa17.18■□□□□ 0.34
PCNA-201ENST00000379143 CHD2O14647 1828 aaKnown RBP17.16■□□□□ 0.34
PCNA-201ENST00000379143 SETD1AO15047 1707 aaKnown RBP17.16■□□□□ 0.34
PCNA-201ENST00000379143 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
PCNA-201ENST00000379143 SCAF1Q9H7N4 1312 aaKnown RBP17.16■□□□□ 0.34
PCNA-201ENST00000379143 PIP4K2BP78356 416 aa17.15■□□□□ 0.34
PCNA-201ENST00000379143 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
PCNA-201ENST00000379143 TIMELESSQ9UNS1 1208 aa17.15■□□□□ 0.34
PCNA-201ENST00000379143 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
PCNA-201ENST00000379143 METP08581 1390 aa17.14■□□□□ 0.33
PCNA-201ENST00000379143 TOM1O60784 492 aa17.14■□□□□ 0.33
PCNA-201ENST00000379143 STRCP1A6NGW2 1772 aa17.13■□□□□ 0.33
PCNA-201ENST00000379143 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
PCNA-201ENST00000379143 CFAP70Q5T0N1 1121 aa17.11■□□□□ 0.33
PCNA-201ENST00000379143 AMOTL2Q9Y2J4 779 aa17.11■□□□□ 0.33
PCNA-201ENST00000379143 XRN1Q8IZH2 1706 aaKnown RBP17.11■□□□□ 0.33
PCNA-201ENST00000379143 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
PCNA-201ENST00000379143 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
PCNA-201ENST00000379143 LRRC7Q96NW7 1537 aa17.09■□□□□ 0.33
PCNA-201ENST00000379143 ASXL1Q8IXJ9 1541 aa17.07■□□□□ 0.32
PCNA-201ENST00000379143 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
PCNA-201ENST00000379143 LRPPRCP42704 1394 aaKnown RBP17.07■□□□□ 0.32
PCNA-201ENST00000379143 PTCH1Q13635 1447 aa17.06■□□□□ 0.32
PCNA-201ENST00000379143 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
PCNA-201ENST00000379143 TMEM132EQ6IEE7 984 aa17.06■□□□□ 0.32
PCNA-201ENST00000379143 ADGRB1O14514 1584 aa17.06■□□□□ 0.32
PCNA-201ENST00000379143 YTHDC2Q9H6S0 1430 aaKnown RBP17.06■□□□□ 0.32
PCNA-201ENST00000379143 KNDC1Q76NI1 1749 aa17.06■□□□□ 0.32
PCNA-201ENST00000379143 ABCC11Q96J66 1382 aa17.05■□□□□ 0.32
PCNA-201ENST00000379143 TECPR2O15040 1411 aa17.05■□□□□ 0.32
PCNA-201ENST00000379143 TRPM1Q7Z4N2 1603 aa17.04■□□□□ 0.32
PCNA-201ENST00000379143 TMEM94Q12767 1356 aa17.03■□□□□ 0.32
PCNA-201ENST00000379143 SIRT1Q96EB6 747 aa17.02■□□□□ 0.32
PCNA-201ENST00000379143 STK26Q9P289 416 aa17.02■□□□□ 0.32
PCNA-201ENST00000379143 XIRP1Q702N8 1843 aaKnown RBP17.02■□□□□ 0.31
PCNA-201ENST00000379143 DLC1Q96QB1 1528 aa17.01■□□□□ 0.31
PCNA-201ENST00000379143 FAM135BQ49AJ0 1406 aa17■□□□□ 0.31
PCNA-201ENST00000379143 ROBO2Q9HCK4 1378 aa17■□□□□ 0.31
PCNA-201ENST00000379143 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
PCNA-201ENST00000379143 ROCK2O75116 1388 aaKnown RBP16.99■□□□□ 0.31
PCNA-201ENST00000379143 MSH6P52701 1360 aa16.99■□□□□ 0.31
PCNA-201ENST00000379143 RALGAPBQ86X10 1494 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms