RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 ALKQ9UM73 1620 aa20.39■□□□□ 0.86
UPK1A-202ENST00000379013 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.85
UPK1A-202ENST00000379013 ADGRB3O60242 1522 aa20.37■□□□□ 0.85
UPK1A-202ENST00000379013 ZFYVE9O95405 1425 aa20.37■□□□□ 0.85
UPK1A-202ENST00000379013 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
UPK1A-202ENST00000379013 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
UPK1A-202ENST00000379013 HSPA1LP34931 641 aa20.35■□□□□ 0.85
UPK1A-202ENST00000379013 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
UPK1A-202ENST00000379013 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
UPK1A-202ENST00000379013 RIMS2Q9UQ26 1411 aa20.35■□□□□ 0.85
UPK1A-202ENST00000379013 TOM1O60784 492 aa20.34■□□□□ 0.85
UPK1A-202ENST00000379013 TMEM131LA2VDJ0 1609 aa20.34■□□□□ 0.85
UPK1A-202ENST00000379013 MYO5BQ9ULV0 1848 aa20.33■□□□□ 0.85
UPK1A-202ENST00000379013 KCNA6P17658 529 aa20.33■□□□□ 0.85
UPK1A-202ENST00000379013 SCAF1Q9H7N4 1312 aaKnown RBP20.32■□□□□ 0.84
UPK1A-202ENST00000379013 MPHOSPH9Q99550 1183 aa20.31■□□□□ 0.84
UPK1A-202ENST00000379013 BCANQ96GW7 911 aa20.3■□□□□ 0.84
UPK1A-202ENST00000379013 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
UPK1A-202ENST00000379013 ILDR2Q71H61 639 aa20.28■□□□□ 0.84
UPK1A-202ENST00000379013 PLEKHG1Q9ULL1 1385 aa20.28■□□□□ 0.84
UPK1A-202ENST00000379013 CLSPNQ9HAW4 1339 aa20.27■□□□□ 0.84
UPK1A-202ENST00000379013 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
UPK1A-202ENST00000379013 DHX57Q6P158 1386 aaKnown RBP20.27■□□□□ 0.84
UPK1A-202ENST00000379013 PPP1R15AO75807 674 aaPredicted RBP20.26■□□□□ 0.83
UPK1A-202ENST00000379013 PROSER2Q86WR7 435 aaPredicted RBP20.26■□□□□ 0.83
UPK1A-202ENST00000379013 TBX22Q9Y458 520 aa20.26■□□□□ 0.83
UPK1A-202ENST00000379013 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
UPK1A-202ENST00000379013 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
UPK1A-202ENST00000379013 DISP3Q9P2K9 1392 aa20.25■□□□□ 0.83
UPK1A-202ENST00000379013 FOXD1Q16676 465 aa20.24■□□□□ 0.83
UPK1A-202ENST00000379013 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.24■□□□□ 0.83
UPK1A-202ENST00000379013 HDGFP51858 240 aaKnown RBP20.23■□□□□ 0.83
UPK1A-202ENST00000379013 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
UPK1A-202ENST00000379013 TRPM2O94759 1503 aa20.22■□□□□ 0.83
UPK1A-202ENST00000379013 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
UPK1A-202ENST00000379013 ZNF326Q5BKZ1 582 aaKnown RBP20.18■□□□□ 0.82
UPK1A-202ENST00000379013 KIF1BO60333 1816 aa20.18■□□□□ 0.82
UPK1A-202ENST00000379013 CCDC144AA2RUR9 1427 aa20.17■□□□□ 0.82
UPK1A-202ENST00000379013 NWD1Q149M9 1564 aa20.16■□□□□ 0.82
UPK1A-202ENST00000379013 CLTCL1P53675 1640 aa20.16■□□□□ 0.82
UPK1A-202ENST00000379013 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
UPK1A-202ENST00000379013 CHD2O14647 1828 aaKnown RBP20.14■□□□□ 0.81
UPK1A-202ENST00000379013 ANKRD30BQ9BXX2 1392 aa20.14■□□□□ 0.81
UPK1A-202ENST00000379013 METP08581 1390 aa20.12■□□□□ 0.81
UPK1A-202ENST00000379013 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
UPK1A-202ENST00000379013 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
UPK1A-202ENST00000379013 NRXN3Q9Y4C0 1643 aa20.1■□□□□ 0.81
UPK1A-202ENST00000379013 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
UPK1A-202ENST00000379013 NEXMIFQ5QGS0 1516 aa20.08■□□□□ 0.81
UPK1A-202ENST00000379013 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
UPK1A-202ENST00000379013 MSH6P52701 1360 aa20.06■□□□□ 0.8
UPK1A-202ENST00000379013 SETBP1Q9Y6X0 1596 aa20.05■□□□□ 0.8
UPK1A-202ENST00000379013 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
UPK1A-202ENST00000379013 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
UPK1A-202ENST00000379013 TIMELESSQ9UNS1 1208 aa20.02■□□□□ 0.8
UPK1A-202ENST00000379013 DIP2AQ14689 1571 aa20.02■□□□□ 0.8
UPK1A-202ENST00000379013 NCOA3Q9Y6Q9 1424 aa20.02■□□□□ 0.79
UPK1A-202ENST00000379013 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.79
UPK1A-202ENST00000379013 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
UPK1A-202ENST00000379013 C14orf37Q86TY3 774 aa20.01■□□□□ 0.79
UPK1A-202ENST00000379013 RPGRIP1LQ68CZ1 1315 aa20.01■□□□□ 0.79
UPK1A-202ENST00000379013 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
UPK1A-202ENST00000379013 TONSLQ96HA7 1378 aa20■□□□□ 0.79
UPK1A-202ENST00000379013 RGS17Q9UGC6 210 aaPredicted RBP20■□□□□ 0.79
UPK1A-202ENST00000379013 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
UPK1A-202ENST00000379013 ROBO1Q9Y6N7 1651 aa19.98■□□□□ 0.79
UPK1A-202ENST00000379013 ATF3P18847 181 aa19.96■□□□□ 0.79
UPK1A-202ENST00000379013 ZEB1P37275 1124 aaPredicted RBP19.96■□□□□ 0.79
UPK1A-202ENST00000379013 NEUROD1Q13562 356 aa19.96■□□□□ 0.79
UPK1A-202ENST00000379013 CADPS2Q86UW7 1296 aa19.96■□□□□ 0.79
UPK1A-202ENST00000379013 STAC3Q96MF2 364 aa19.96■□□□□ 0.79
UPK1A-202ENST00000379013 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
UPK1A-202ENST00000379013 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.96■□□□□ 0.79
UPK1A-202ENST00000379013 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.79
UPK1A-202ENST00000379013 SOCS7O14512 581 aa19.95■□□□□ 0.78
UPK1A-202ENST00000379013 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
UPK1A-202ENST00000379013 PPLO60437 1756 aa19.94■□□□□ 0.78
UPK1A-202ENST00000379013 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
UPK1A-202ENST00000379013 SIN3AQ96ST3 1273 aa19.93■□□□□ 0.78
UPK1A-202ENST00000379013 SETD1AO15047 1707 aaKnown RBP19.91■□□□□ 0.78
UPK1A-202ENST00000379013 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
UPK1A-202ENST00000379013 DDX17Q92841 729 aaKnown RBP19.91■□□□□ 0.78
UPK1A-202ENST00000379013 MST1RQ04912 1400 aa19.88■□□□□ 0.77
UPK1A-202ENST00000379013 MYOM2P54296 1465 aa19.87■□□□□ 0.77
UPK1A-202ENST00000379013 WAPLQ7Z5K2 1190 aa19.87■□□□□ 0.77
UPK1A-202ENST00000379013 STK26Q9P289 416 aa19.87■□□□□ 0.77
UPK1A-202ENST00000379013 ADGRL3Q9HAR2 1447 aa19.86■□□□□ 0.77
UPK1A-202ENST00000379013 PHF23Q9BUL5 403 aaPredicted RBP19.86■□□□□ 0.77
UPK1A-202ENST00000379013 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
UPK1A-202ENST00000379013 LAMC1P11047 1609 aa19.84■□□□□ 0.77
UPK1A-202ENST00000379013 DCCP43146 1447 aa19.84■□□□□ 0.77
UPK1A-202ENST00000379013 COL16A1Q07092 1604 aaPredicted RBP19.84■□□□□ 0.77
UPK1A-202ENST00000379013 PHLPP1O60346 1717 aa19.83■□□□□ 0.77
UPK1A-202ENST00000379013 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.77
UPK1A-202ENST00000379013 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
UPK1A-202ENST00000379013 C14orf93Q9H972 538 aaKnown RBP19.83■□□□□ 0.77
UPK1A-202ENST00000379013 PTCH1Q13635 1447 aa19.83■□□□□ 0.76
UPK1A-202ENST00000379013 JCADQ9P266 1359 aa19.83■□□□□ 0.76
UPK1A-202ENST00000379013 DCAF11Q8TEB1 546 aa19.82■□□□□ 0.76
UPK1A-202ENST00000379013 PRAG1Q86YV5 1406 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms