RNA–Protein interactions for RNA: ENST00000378247.7

SPIRE2-201, Transcript of spire type actin nucleation factor 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SPIRE2, Length 3,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE2-201ENST00000378247 PRAG1Q86YV5 1406 aa24.28■■□□□ 1.48
SPIRE2-201ENST00000378247 BLMP54132 1417 aaPredicted RBP24.26■■□□□ 1.47
SPIRE2-201ENST00000378247 USP19O94966 1318 aa24.25■■□□□ 1.47
SPIRE2-201ENST00000378247 ADGBQ8N7X0 1667 aa24.25■■□□□ 1.47
SPIRE2-201ENST00000378247 SYCP2Q9BX26 1530 aa24.24■■□□□ 1.47
SPIRE2-201ENST00000378247 ABCC2Q92887 1545 aa24.24■■□□□ 1.47
SPIRE2-201ENST00000378247 PANK2Q9BZ23 570 aa24.23■■□□□ 1.47
SPIRE2-201ENST00000378247 AFAP1Q8N556 730 aa24.23■■□□□ 1.47
SPIRE2-201ENST00000378247 UBE2Q2Q8WVN8 375 aa24.23■■□□□ 1.47
SPIRE2-201ENST00000378247 NAP1L5Q96NT1 182 aaPredicted RBP24.22■■□□□ 1.47
SPIRE2-201ENST00000378247 SHANK2Q9UPX8 1470 aa24.21■■□□□ 1.47
SPIRE2-201ENST00000378247 AMER1Q5JTC6 1135 aaPredicted RBP24.21■■□□□ 1.47
SPIRE2-201ENST00000378247 SAMD9LQ8IVG5 1584 aa24.21■■□□□ 1.47
SPIRE2-201ENST00000378247 BECN1Q14457 450 aa24.21■■□□□ 1.47
SPIRE2-201ENST00000378247 ZMYM4Q5VZL5 1548 aa24.2■■□□□ 1.46
SPIRE2-201ENST00000378247 FAM43AQ8N2R8 423 aa24.2■■□□□ 1.46
SPIRE2-201ENST00000378247 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.2■■□□□ 1.46
SPIRE2-201ENST00000378247 TTC37Q6PGP7 1564 aa24.2■■□□□ 1.46
SPIRE2-201ENST00000378247 CROCC2H7BZ55 1655 aa24.18■■□□□ 1.46
SPIRE2-201ENST00000378247 MAGI2Q86UL8 1455 aa24.16■■□□□ 1.46
SPIRE2-201ENST00000378247 COL17A1Q9UMD9 1497 aaPredicted RBP24.16■■□□□ 1.46
SPIRE2-201ENST00000378247 CENPJQ9HC77 1338 aaPredicted RBP24.16■■□□□ 1.46
SPIRE2-201ENST00000378247 A2MP01023 1474 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 ARHGEF12Q9NZN5 1544 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 ZNF521Q96K83 1311 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 MFAP1P55081 439 aaKnown RBP24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 RSPH6AQ9H0K4 717 aa24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 UPF2Q9HAU5 1272 aaKnown RBP24.15■■□□□ 1.46
SPIRE2-201ENST00000378247 RLBP1P12271 317 aa24.14■■□□□ 1.46
SPIRE2-201ENST00000378247 PCDHB15Q9Y5E8 787 aa24.14■■□□□ 1.46
SPIRE2-201ENST00000378247 SPAG9O60271 1321 aaKnown RBP24.14■■□□□ 1.46
SPIRE2-201ENST00000378247 PLEKHH2Q8IVE3 1493 aa24.14■■□□□ 1.46
SPIRE2-201ENST00000378247 TBC1D2Q9BYX2 928 aa24.14■■□□□ 1.45
SPIRE2-201ENST00000378247 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
SPIRE2-201ENST00000378247 E9PCH4 1651 aa24.11■■□□□ 1.45
SPIRE2-201ENST00000378247 PDZRN3Q9UPQ7 1066 aa24.11■■□□□ 1.45
SPIRE2-201ENST00000378247 NPM1P06748 294 aaKnown RBP eCLIP24.11■■□□□ 1.45
SPIRE2-201ENST00000378247 KDM5DQ9BY66 1539 aa24.11■■□□□ 1.45
SPIRE2-201ENST00000378247 FAM135AQ9P2D6 1515 aa24.11■■□□□ 1.45
SPIRE2-201ENST00000378247 ARHGEF5Q12774 1597 aa24.1■■□□□ 1.45
SPIRE2-201ENST00000378247 E9PSI1 815 aa24.1■■□□□ 1.45
SPIRE2-201ENST00000378247 XRCC6P12956 609 aaKnown RBP eCLIP24.1■■□□□ 1.45
SPIRE2-201ENST00000378247 PLCH2O75038 1416 aa24.1■■□□□ 1.45
SPIRE2-201ENST00000378247 FOXD4L1Q9NU39 408 aa24.09■■□□□ 1.45
SPIRE2-201ENST00000378247 PLA2R1Q13018 1463 aa24.09■■□□□ 1.45
SPIRE2-201ENST00000378247 TRAPPC8Q9Y2L5 1435 aa24.08■■□□□ 1.44
SPIRE2-201ENST00000378247 GOLGA6L3A6NEY3 463 aa24.06■■□□□ 1.44
SPIRE2-201ENST00000378247 OSCARQ8IYS5 282 aa24.06■■□□□ 1.44
SPIRE2-201ENST00000378247 WWC1Q8IX03 1113 aa24.06■■□□□ 1.44
SPIRE2-201ENST00000378247 CLASP1Q7Z460 1538 aa24.05■■□□□ 1.44
SPIRE2-201ENST00000378247 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
SPIRE2-201ENST00000378247 CGNL1Q0VF96 1302 aa24.04■■□□□ 1.44
SPIRE2-201ENST00000378247 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
SPIRE2-201ENST00000378247 CFAP70Q5T0N1 1121 aa24.03■■□□□ 1.44
SPIRE2-201ENST00000378247 ZCCHC11Q5TAX3 1644 aaKnown RBP24.03■■□□□ 1.44
SPIRE2-201ENST00000378247 TRPM1Q7Z4N2 1603 aa24.03■■□□□ 1.44
SPIRE2-201ENST00000378247 PNNQ9H307 717 aaKnown RBP24.02■■□□□ 1.44
SPIRE2-201ENST00000378247 KIF3BO15066 747 aa24.02■■□□□ 1.44
SPIRE2-201ENST00000378247 CARD14Q9BXL6 1004 aa24.02■■□□□ 1.44
SPIRE2-201ENST00000378247 L1TD1Q5T7N2 865 aaKnown RBP24.01■■□□□ 1.43
SPIRE2-201ENST00000378247 MAPK8IP3Q9UPT6 1336 aa24.01■■□□□ 1.43
SPIRE2-201ENST00000378247 ANTXR1Q9H6X2 564 aa24.01■■□□□ 1.43
SPIRE2-201ENST00000378247 TRMT2AQ8IZ69 625 aaKnown RBP24■■□□□ 1.43
SPIRE2-201ENST00000378247 EIF3AQ14152 1382 aaKnown RBP24■■□□□ 1.43
SPIRE2-201ENST00000378247 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
SPIRE2-201ENST00000378247 WDR7Q9Y4E6 1490 aa23.99■■□□□ 1.43
SPIRE2-201ENST00000378247 VSIG10Q8N0Z9 540 aa23.99■■□□□ 1.43
SPIRE2-201ENST00000378247 TCP11L2Q8N4U5 519 aa23.99■■□□□ 1.43
SPIRE2-201ENST00000378247 GPRASP1Q5JY77 1395 aa23.98■■□□□ 1.43
SPIRE2-201ENST00000378247 MCM4P33991 863 aa23.98■■□□□ 1.43
SPIRE2-201ENST00000378247 TSR2Q969E8 191 aaKnown RBP23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 TBC1D32Q96NH3 1257 aa23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 RARSP54136 660 aaKnown RBP23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 TRAK2O60296 914 aa23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 PDE3AQ14432 1141 aa23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 FTSJ3Q8IY81 847 aaKnown RBP23.97■■□□□ 1.43
SPIRE2-201ENST00000378247 UHRF1BP1LA0JNW5 1464 aa23.96■■□□□ 1.43
SPIRE2-201ENST00000378247 MORC1Q86VD1 984 aa23.96■■□□□ 1.43
SPIRE2-201ENST00000378247 CDCA8Q53HL2 280 aa23.95■■□□□ 1.42
SPIRE2-201ENST00000378247 SCAPERQ9BY12 1400 aa23.94■■□□□ 1.42
SPIRE2-201ENST00000378247 C22orf23Q9BZE7 217 aa23.94■■□□□ 1.42
SPIRE2-201ENST00000378247 SLC12A5Q9H2X9 1139 aa23.93■■□□□ 1.42
SPIRE2-201ENST00000378247 PMFBP1Q8TBY8 1022 aa23.92■■□□□ 1.42
SPIRE2-201ENST00000378247 TRAK1Q9UPV9 953 aa23.91■■□□□ 1.42
SPIRE2-201ENST00000378247 SAFB2Q14151 953 aaKnown RBP eCLIP23.91■■□□□ 1.42
SPIRE2-201ENST00000378247 NUTM2DQ5VT03 806 aaPredicted RBP23.91■■□□□ 1.42
SPIRE2-201ENST00000378247 ITPRIPQ8IWB1 547 aa23.9■■□□□ 1.42
SPIRE2-201ENST00000378247 FANCAO15360 1455 aa23.9■■□□□ 1.42
SPIRE2-201ENST00000378247 DUOX2Q9NRD8 1548 aa23.9■■□□□ 1.42
SPIRE2-201ENST00000378247 RWDD1Q9H446 243 aaPredicted RBP23.89■■□□□ 1.42
SPIRE2-201ENST00000378247 PRDM15P57071 1507 aaPredicted RBP23.89■■□□□ 1.42
SPIRE2-201ENST00000378247 ASXL2Q76L83 1435 aa23.89■■□□□ 1.41
SPIRE2-201ENST00000378247 U2AF1L5P0DN76 240 aaPredicted RBP23.89■■□□□ 1.41
SPIRE2-201ENST00000378247 U2AF1Q01081 240 aaKnown RBP eCLIP23.89■■□□□ 1.41
SPIRE2-201ENST00000378247 HSP90AA1P07900 732 aaKnown RBP23.88■■□□□ 1.41
SPIRE2-201ENST00000378247 MTHFSP49914 203 aa23.87■■□□□ 1.41
SPIRE2-201ENST00000378247 U2SURPO15042 1029 aaKnown RBP23.86■■□□□ 1.41
SPIRE2-201ENST00000378247 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms