RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 DIAPH3Q9NSV4 1193 aa17.33■□□□□ 0.37
TRIM13-202ENST00000378182 ERICH2A1L162 156 aa17.33■□□□□ 0.36
TRIM13-202ENST00000378182 GOLGA6L19H0YKK7 550 aa17.33■□□□□ 0.36
TRIM13-202ENST00000378182 SOGA1O94964 1423 aa17.33■□□□□ 0.36
TRIM13-202ENST00000378182 ZFYVE27Q5T4F4 411 aa17.33■□□□□ 0.36
TRIM13-202ENST00000378182 RALBP1Q15311 655 aa17.32■□□□□ 0.36
TRIM13-202ENST00000378182 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
TRIM13-202ENST00000378182 R3HCC1Q9Y3T6 440 aaKnown RBP17.32■□□□□ 0.36
TRIM13-202ENST00000378182 ODF2Q5BJF6 829 aa17.31■□□□□ 0.36
TRIM13-202ENST00000378182 TPM1P09493 284 aa17.31■□□□□ 0.36
TRIM13-202ENST00000378182 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
TRIM13-202ENST00000378182 NAP1L1P55209 391 aaKnown RBP17.3■□□□□ 0.36
TRIM13-202ENST00000378182 TNIKQ9UKE5 1360 aa17.3■□□□□ 0.36
TRIM13-202ENST00000378182 ZNF592Q92610 1267 aa17.3■□□□□ 0.36
TRIM13-202ENST00000378182 STRN4Q9NRL3 753 aa17.3■□□□□ 0.36
TRIM13-202ENST00000378182 PHF14O94880 888 aa17.3■□□□□ 0.36
TRIM13-202ENST00000378182 CT47A1Q5JQC4 288 aaPredicted RBP17.3■□□□□ 0.36
TRIM13-202ENST00000378182 NEUROD6Q96NK8 337 aa17.29■□□□□ 0.36
TRIM13-202ENST00000378182 GOLGA6L3A6NEY3 463 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 TRDNQ13061 729 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 CPLX1O14810 134 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 BECN2A8MW95 431 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 STK11IPQ8N1F8 1099 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 NACADO15069 1562 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
TRIM13-202ENST00000378182 ABCC8Q09428 1581 aa17.28■□□□□ 0.36
TRIM13-202ENST00000378182 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
TRIM13-202ENST00000378182 CCDC47Q96A33 483 aaKnown RBP17.27■□□□□ 0.35
TRIM13-202ENST00000378182 FAM69CQ0P6D2 419 aa17.26■□□□□ 0.35
TRIM13-202ENST00000378182 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
TRIM13-202ENST00000378182 KANK4Q5T7N3 995 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-202ENST00000378182 NLRP2Q9NX02 1062 aa17.26■□□□□ 0.35
TRIM13-202ENST00000378182 EPS15P42566 896 aa17.25■□□□□ 0.35
TRIM13-202ENST00000378182 WWC2Q6AWC2 1192 aa17.25■□□□□ 0.35
TRIM13-202ENST00000378182 PANK3Q9H999 370 aa17.25■□□□□ 0.35
TRIM13-202ENST00000378182 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
TRIM13-202ENST00000378182 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
TRIM13-202ENST00000378182 WASHC4Q2M389 1173 aa17.24■□□□□ 0.35
TRIM13-202ENST00000378182 DDX58O95786 925 aaKnown RBP17.24■□□□□ 0.35
TRIM13-202ENST00000378182 G3BP1Q13283 466 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRIM13-202ENST00000378182 HMOX1P09601 288 aa17.24■□□□□ 0.35
TRIM13-202ENST00000378182 CPLX2Q6PUV4 134 aaKnown RBP17.24■□□□□ 0.35
TRIM13-202ENST00000378182 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
TRIM13-202ENST00000378182 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
TRIM13-202ENST00000378182 CCDC70Q6NSX1 233 aa17.23■□□□□ 0.35
TRIM13-202ENST00000378182 FKBP5Q13451 457 aaPredicted RBP17.22■□□□□ 0.35
TRIM13-202ENST00000378182 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRIM13-202ENST00000378182 VSIG10Q8N0Z9 540 aa17.21■□□□□ 0.34
TRIM13-202ENST00000378182 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.34
TRIM13-202ENST00000378182 HSP90AB2PQ58FF8 381 aa17.2■□□□□ 0.34
TRIM13-202ENST00000378182 TSPYL4Q9UJ04 414 aa17.2■□□□□ 0.34
TRIM13-202ENST00000378182 SETQ01105 290 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-202ENST00000378182 SKIDA1Q1XH10 827 aa17.19■□□□□ 0.34
TRIM13-202ENST00000378182 RBM19Q9Y4C8 960 aaKnown RBP17.19■□□□□ 0.34
TRIM13-202ENST00000378182 SMARCA2P51531 1590 aa17.18■□□□□ 0.34
TRIM13-202ENST00000378182 ANKRD20A12PQ8NF67 263 aa17.18■□□□□ 0.34
TRIM13-202ENST00000378182 BICD2Q8TD16 824 aa17.18■□□□□ 0.34
TRIM13-202ENST00000378182 RUFY2Q8WXA3 655 aa17.18■□□□□ 0.34
TRIM13-202ENST00000378182 IPO7O95373 1038 aaKnown RBP17.17■□□□□ 0.34
TRIM13-202ENST00000378182 KIF6Q6ZMV9 814 aa17.17■□□□□ 0.34
TRIM13-202ENST00000378182 RAB3GAP2Q9H2M9 1393 aa17.17■□□□□ 0.34
TRIM13-202ENST00000378182 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
TRIM13-202ENST00000378182 ESCO1Q5FWF5 840 aa17.17■□□□□ 0.34
TRIM13-202ENST00000378182 RIPK4P57078 832 aa17.16■□□□□ 0.34
TRIM13-202ENST00000378182 RRP12Q5JTH9 1297 aaKnown RBP17.16■□□□□ 0.34
TRIM13-202ENST00000378182 JPH4Q96JJ6 628 aa17.16■□□□□ 0.34
TRIM13-202ENST00000378182 TTLL5Q6EMB2 1281 aa17.15■□□□□ 0.34
TRIM13-202ENST00000378182 ZKSCAN1P17029 563 aaPredicted RBP17.15■□□□□ 0.34
TRIM13-202ENST00000378182 L3MBTL2Q969R5 705 aa17.15■□□□□ 0.34
TRIM13-202ENST00000378182 HOOK1Q9UJC3 728 aaKnown RBP17.15■□□□□ 0.34
TRIM13-202ENST00000378182 PPM1FP49593 454 aaPredicted RBP17.15■□□□□ 0.34
TRIM13-202ENST00000378182 PAXIP1Q6ZW49 1069 aaPredicted RBP17.15■□□□□ 0.34
TRIM13-202ENST00000378182 CHMP4BP1P59074 171 aa17.14■□□□□ 0.33
TRIM13-202ENST00000378182 CCDC144AA2RUR9 1427 aa17.14■□□□□ 0.33
TRIM13-202ENST00000378182 VPS37CA5D8V6 355 aaPredicted RBP17.14■□□□□ 0.33
TRIM13-202ENST00000378182 CHMP4CQ96CF2 233 aa17.14■□□□□ 0.33
TRIM13-202ENST00000378182 CCER2I3L3R5 266 aa17.14■□□□□ 0.33
TRIM13-202ENST00000378182 DDX49Q9Y6V7 483 aaKnown RBP17.14■□□□□ 0.33
TRIM13-202ENST00000378182 DIAPH1O60610 1272 aaKnown RBP17.13■□□□□ 0.33
TRIM13-202ENST00000378182 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
TRIM13-202ENST00000378182 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
TRIM13-202ENST00000378182 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
TRIM13-202ENST00000378182 FHOD3Q2V2M9 1422 aa17.13■□□□□ 0.33
TRIM13-202ENST00000378182 ST20-MTHFSA0A0A6YYL1 179 aa17.13■□□□□ 0.33
TRIM13-202ENST00000378182 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
TRIM13-202ENST00000378182 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
TRIM13-202ENST00000378182 FAM161AQ3B820 660 aa17.12■□□□□ 0.33
TRIM13-202ENST00000378182 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
TRIM13-202ENST00000378182 SAFBQ15424 915 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM13-202ENST00000378182 RALYLQ86SE5 291 aaKnown RBP17.12■□□□□ 0.33
TRIM13-202ENST00000378182 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
TRIM13-202ENST00000378182 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM13-202ENST00000378182 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
TRIM13-202ENST00000378182 ABTB2Q8N961 1025 aa17.11■□□□□ 0.33
TRIM13-202ENST00000378182 DNAJC2Q99543 621 aaKnown RBP17.11■□□□□ 0.33
TRIM13-202ENST00000378182 UACAQ9BZF9 1416 aa17.1■□□□□ 0.33
TRIM13-202ENST00000378182 BRMS1Q9HCU9 246 aa17.1■□□□□ 0.33
TRIM13-202ENST00000378182 FMN1Q68DA7 1419 aa17.1■□□□□ 0.33
TRIM13-202ENST00000378182 ATP2B1P20020 1258 aa17.1■□□□□ 0.33
TRIM13-202ENST00000378182 ATP6V1DQ9Y5K8 247 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms