RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 ARHGAP35Q9NRY4 1499 aa19.98■□□□□ 0.79
RGP1-201ENST00000378078 EPS15P42566 896 aa19.98■□□□□ 0.79
RGP1-201ENST00000378078 NEXNQ0ZGT2 675 aa19.98■□□□□ 0.79
RGP1-201ENST00000378078 ZNF771Q7L3S4 317 aaPredicted RBP19.97■□□□□ 0.79
RGP1-201ENST00000378078 CUX2O14529 1486 aa19.97■□□□□ 0.79
RGP1-201ENST00000378078 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
RGP1-201ENST00000378078 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
RGP1-201ENST00000378078 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
RGP1-201ENST00000378078 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
RGP1-201ENST00000378078 HOMER1Q86YM7 354 aa19.97■□□□□ 0.79
RGP1-201ENST00000378078 R3HCC1Q9Y3T6 440 aaKnown RBP19.96■□□□□ 0.79
RGP1-201ENST00000378078 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
RGP1-201ENST00000378078 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
RGP1-201ENST00000378078 KIF3AQ9Y496 699 aa19.96■□□□□ 0.79
RGP1-201ENST00000378078 DDX49Q9Y6V7 483 aaKnown RBP19.96■□□□□ 0.79
RGP1-201ENST00000378078 BICD2Q8TD16 824 aa19.96■□□□□ 0.79
RGP1-201ENST00000378078 EEA1Q15075 1411 aa19.95■□□□□ 0.78
RGP1-201ENST00000378078 LMOD3Q0VAK6 560 aa19.95■□□□□ 0.78
RGP1-201ENST00000378078 WASHC4Q2M389 1173 aa19.94■□□□□ 0.78
RGP1-201ENST00000378078 HDAC5Q9UQL6 1122 aa19.94■□□□□ 0.78
RGP1-201ENST00000378078 VPS37CA5D8V6 355 aaPredicted RBP19.93■□□□□ 0.78
RGP1-201ENST00000378078 HMOX1P09601 288 aa19.93■□□□□ 0.78
RGP1-201ENST00000378078 PDILTQ8N807 584 aa19.92■□□□□ 0.78
RGP1-201ENST00000378078 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
RGP1-201ENST00000378078 TRDNQ13061 729 aa19.92■□□□□ 0.78
RGP1-201ENST00000378078 CCDC47Q96A33 483 aaKnown RBP19.92■□□□□ 0.78
RGP1-201ENST00000378078 RALBP1Q15311 655 aa19.91■□□□□ 0.78
RGP1-201ENST00000378078 CEP164Q9UPV0 1460 aa19.91■□□□□ 0.78
RGP1-201ENST00000378078 PANK3Q9H999 370 aa19.91■□□□□ 0.78
RGP1-201ENST00000378078 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
RGP1-201ENST00000378078 PPM1FP49593 454 aaPredicted RBP19.9■□□□□ 0.78
RGP1-201ENST00000378078 RIC3Q7Z5B4 369 aa19.9■□□□□ 0.78
RGP1-201ENST00000378078 STRN4Q9NRL3 753 aa19.9■□□□□ 0.78
RGP1-201ENST00000378078 COG6Q9Y2V7 657 aa19.9■□□□□ 0.78
RGP1-201ENST00000378078 CHMP4BP1P59074 171 aa19.89■□□□□ 0.78
RGP1-201ENST00000378078 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.78
RGP1-201ENST00000378078 CARMIL1Q5VZK9 1371 aa19.89■□□□□ 0.77
RGP1-201ENST00000378078 ATP2B1P20020 1258 aa19.88■□□□□ 0.77
RGP1-201ENST00000378078 EFCAB2Q5VUJ9 269 aa19.88■□□□□ 0.77
RGP1-201ENST00000378078 PIP4K2BP78356 416 aa19.88■□□□□ 0.77
RGP1-201ENST00000378078 IPO7O95373 1038 aaKnown RBP19.88■□□□□ 0.77
RGP1-201ENST00000378078 FAM161AQ3B820 660 aa19.87■□□□□ 0.77
RGP1-201ENST00000378078 CRBNQ96SW2 442 aa19.87■□□□□ 0.77
RGP1-201ENST00000378078 RBM42Q9BTD8 480 aaKnown RBP19.87■□□□□ 0.77
RGP1-201ENST00000378078 G3BP1Q13283 466 aaKnown RBP eCLIP19.87■□□□□ 0.77
RGP1-201ENST00000378078 FKBP5Q13451 457 aaPredicted RBP19.87■□□□□ 0.77
RGP1-201ENST00000378078 CHMP4AQ9BY43 222 aa19.86■□□□□ 0.77
RGP1-201ENST00000378078 ANKRD20A12PQ8NF67 263 aa19.86■□□□□ 0.77
RGP1-201ENST00000378078 WWC2Q6AWC2 1192 aa19.85■□□□□ 0.77
RGP1-201ENST00000378078 RBM5P52756 815 aaKnown RBP eCLIP19.85■□□□□ 0.77
RGP1-201ENST00000378078 BRPF1P55201 1214 aaPredicted RBP19.85■□□□□ 0.77
RGP1-201ENST00000378078 ATF3P18847 181 aa19.85■□□□□ 0.77
RGP1-201ENST00000378078 RUFY1Q96T51 708 aa19.84■□□□□ 0.77
RGP1-201ENST00000378078 CPLX2Q6PUV4 134 aaKnown RBP19.84■□□□□ 0.77
RGP1-201ENST00000378078 PLCD4Q9BRC7 762 aa19.83■□□□□ 0.77
RGP1-201ENST00000378078 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.83■□□□□ 0.77
RGP1-201ENST00000378078 MYCNP04198 464 aaPredicted RBP19.83■□□□□ 0.76
RGP1-201ENST00000378078 IPO9Q96P70 1041 aaKnown RBP19.83■□□□□ 0.76
RGP1-201ENST00000378078 DNAJC2Q99543 621 aaKnown RBP19.83■□□□□ 0.76
RGP1-201ENST00000378078 NLRP2Q9NX02 1062 aa19.83■□□□□ 0.76
RGP1-201ENST00000378078 CAGE1Q8TC20 777 aa19.82■□□□□ 0.76
RGP1-201ENST00000378078 TSPYL4Q9UJ04 414 aa19.82■□□□□ 0.76
RGP1-201ENST00000378078 WDR70Q9NW82 654 aa19.82■□□□□ 0.76
RGP1-201ENST00000378078 SPINK5Q9NQ38 1064 aaPredicted RBP19.81■□□□□ 0.76
RGP1-201ENST00000378078 FHAD1B1AJZ9 1412 aa19.81■□□□□ 0.76
RGP1-201ENST00000378078 TIMELESSQ9UNS1 1208 aa19.81■□□□□ 0.76
RGP1-201ENST00000378078 CARMIL2Q6F5E8 1435 aa19.81■□□□□ 0.76
RGP1-201ENST00000378078 RIPK4P57078 832 aa19.8■□□□□ 0.76
RGP1-201ENST00000378078 CEBPZQ03701 1054 aaKnown RBP19.8■□□□□ 0.76
RGP1-201ENST00000378078 GPS2Q13227 327 aa19.8■□□□□ 0.76
RGP1-201ENST00000378078 ZKSCAN1P17029 563 aaPredicted RBP19.8■□□□□ 0.76
RGP1-201ENST00000378078 CALRP27797 417 aaKnown RBP19.8■□□□□ 0.76
RGP1-201ENST00000378078 ANKRD62A6NC57 917 aa19.79■□□□□ 0.76
RGP1-201ENST00000378078 HSP90AA2PQ14568 343 aaPredicted RBP19.79■□□□□ 0.76
RGP1-201ENST00000378078 LRRFIP1Q32MZ4 808 aaKnown RBP19.79■□□□□ 0.76
RGP1-201ENST00000378078 CCDC97Q96F63 343 aaPredicted RBP19.79■□□□□ 0.76
RGP1-201ENST00000378078 DDX11L8A8MPP1 907 aa19.79■□□□□ 0.76
RGP1-201ENST00000378078 SF3B2Q13435 895 aaKnown RBP19.79■□□□□ 0.76
RGP1-201ENST00000378078 ZHX3Q9H4I2 956 aa19.79■□□□□ 0.76
RGP1-201ENST00000378078 SASS6Q6UVJ0 657 aa19.79■□□□□ 0.76
RGP1-201ENST00000378078 OFD1O75665 1012 aa19.78■□□□□ 0.76
RGP1-201ENST00000378078 RUFY2Q8WXA3 655 aa19.78■□□□□ 0.76
RGP1-201ENST00000378078 ANKRD30AQ9BXX3 1397 aa19.78■□□□□ 0.76
RGP1-201ENST00000378078 EXOC6Q8TAG9 804 aa19.78■□□□□ 0.76
RGP1-201ENST00000378078 HOOK1Q9UJC3 728 aaKnown RBP19.78■□□□□ 0.76
RGP1-201ENST00000378078 DDX58O95786 925 aaKnown RBP19.78■□□□□ 0.76
RGP1-201ENST00000378078 PIBF1Q8WXW3 757 aa19.77■□□□□ 0.76
RGP1-201ENST00000378078 MAP4K4O95819 1239 aaPredicted RBP19.77■□□□□ 0.76
RGP1-201ENST00000378078 MATR3P43243 847 aaKnown RBP eCLIP19.77■□□□□ 0.75
RGP1-201ENST00000378078 MAP7D2Q96T17 732 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 CCER2I3L3R5 266 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 FAM13BQ9NYF5 915 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 IFT57Q9NWB7 429 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 L3MBTL2Q969R5 705 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 ZKSCAN2Q63HK3 967 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 SMC3Q9UQE7 1217 aa19.76■□□□□ 0.75
RGP1-201ENST00000378078 TDRD9Q8NDG6 1382 aaKnown RBP19.75■□□□□ 0.75
RGP1-201ENST00000378078 SAFBQ15424 915 aaKnown RBP eCLIP19.75■□□□□ 0.75
RGP1-201ENST00000378078 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
RGP1-201ENST00000378078 SOGA1O94964 1423 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms