RNA–Protein interactions for RNA: ENST00000376893.7

SSX3-202, Transcript of SSX family member 3, humanhuman

TSL 2 BASIC

Gene SSX3, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-202ENST00000376893 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.9
SSX3-202ENST00000376893 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
SSX3-202ENST00000376893 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
SSX3-202ENST00000376893 MYSM1Q5VVJ2 828 aa9.4□□□□□ -0.9
SSX3-202ENST00000376893 DDX12PQ92771 950 aa9.4□□□□□ -0.9
SSX3-202ENST00000376893 FAM217BQ9NTX9 383 aaPredicted RBP9.4□□□□□ -0.9
SSX3-202ENST00000376893 CLASP1Q7Z460 1538 aa9.4□□□□□ -0.91
SSX3-202ENST00000376893 C2orf72A6NCS6 295 aa9.39□□□□□ -0.91
SSX3-202ENST00000376893 RFC5P40937 340 aa9.39□□□□□ -0.91
SSX3-202ENST00000376893 PRIM1P49642 420 aaKnown RBP9.39□□□□□ -0.91
SSX3-202ENST00000376893 ERICH3Q5RHP9 1530 aa9.39□□□□□ -0.91
SSX3-202ENST00000376893 LOC105371045A0A1W2PR82 267 aa9.38□□□□□ -0.91
SSX3-202ENST00000376893 E9PSI1 815 aa9.38□□□□□ -0.91
SSX3-202ENST00000376893 CEP170Q5SW79 1584 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 TTLL13PA6NNM8 815 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 RBM25P49756 843 aaKnown RBP9.37□□□□□ -0.91
SSX3-202ENST00000376893 TUSC1Q2TAM9 212 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 PRM3Q9NNZ6 103 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 SNRKQ9NRH2 765 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
SSX3-202ENST00000376893 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
SSX3-202ENST00000376893 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
SSX3-202ENST00000376893 RIMBP3CA6NJZ7 1639 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 RIMBP3BA6NNM3 1639 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 RIMBP3Q9UFD9 1639 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 FOXD4L5Q5VV16 416 aaPredicted RBP9.35□□□□□ -0.91
SSX3-202ENST00000376893 KIF27Q86VH2 1401 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 FOXD4L4Q8WXT5 416 aaPredicted RBP9.35□□□□□ -0.91
SSX3-202ENST00000376893 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 CUL7Q14999 1698 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
SSX3-202ENST00000376893 FHAD1B1AJZ9 1412 aa9.34□□□□□ -0.91
SSX3-202ENST00000376893 IGSF3O75054 1194 aa9.34□□□□□ -0.91
SSX3-202ENST00000376893 OATP04181 439 aa9.34□□□□□ -0.91
SSX3-202ENST00000376893 PHOX2BQ99453 314 aa9.34□□□□□ -0.91
SSX3-202ENST00000376893 EPAS1Q99814 870 aa9.34□□□□□ -0.91
SSX3-202ENST00000376893 ATP1B4Q9UN42 357 aaPredicted RBP9.34□□□□□ -0.91
SSX3-202ENST00000376893 EVI5O60447 810 aa9.33□□□□□ -0.92
SSX3-202ENST00000376893 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
SSX3-202ENST00000376893 BMP2KQ9NSY1 1161 aaPredicted RBP9.33□□□□□ -0.92
SSX3-202ENST00000376893 NUP160Q12769 1436 aa9.32□□□□□ -0.92
SSX3-202ENST00000376893 DPY19L2Q6NUT2 758 aa9.32□□□□□ -0.92
SSX3-202ENST00000376893 MTMR14Q8NCE2 650 aa9.32□□□□□ -0.92
SSX3-202ENST00000376893 UPF1Q92900 1129 aaKnown RBP eCLIP9.32□□□□□ -0.92
SSX3-202ENST00000376893 GLMNQ92990 594 aa9.32□□□□□ -0.92
SSX3-202ENST00000376893 ANO8Q9HCE9 1232 aaPredicted RBP9.32□□□□□ -0.92
SSX3-202ENST00000376893 PDCD7Q8N8D1 485 aaKnown RBP9.31□□□□□ -0.92
SSX3-202ENST00000376893 ERCC6L2Q5T890 1561 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 GABBR2O75899 941 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 PHF14O94880 888 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 METTL3Q86U44 580 aaKnown RBP9.3□□□□□ -0.92
SSX3-202ENST00000376893 CHMP7Q8WUX9 453 aaPredicted RBP9.3□□□□□ -0.92
SSX3-202ENST00000376893 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 GDPD2Q9HCC8 539 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 BOLA1Q9Y3E2 137 aa9.3□□□□□ -0.92
SSX3-202ENST00000376893 ARAP1Q96P48 1450 aa9.29□□□□□ -0.92
SSX3-202ENST00000376893 TRIM35Q9UPQ4 493 aa9.29□□□□□ -0.92
SSX3-202ENST00000376893 IGF1RP08069 1367 aa9.28□□□□□ -0.92
SSX3-202ENST00000376893 ZNF428Q96B54 188 aa9.28□□□□□ -0.92
SSX3-202ENST00000376893 SHROOM2Q13796 1616 aa9.27□□□□□ -0.92
SSX3-202ENST00000376893 CSB-PGBD3P0DP91 1061 aa9.27□□□□□ -0.93
SSX3-202ENST00000376893 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.93
SSX3-202ENST00000376893 CDHR5Q9HBB8 845 aa9.27□□□□□ -0.93
SSX3-202ENST00000376893 G3V3G9 751 aa9.26□□□□□ -0.93
SSX3-202ENST00000376893 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
SSX3-202ENST00000376893 GJA5P36382 358 aa9.26□□□□□ -0.93
SSX3-202ENST00000376893 SRPK2P78362 688 aaKnown RBP9.26□□□□□ -0.93
SSX3-202ENST00000376893 CCDC27Q2M243 656 aa9.26□□□□□ -0.93
SSX3-202ENST00000376893 CERKQ8TCT0 537 aa9.26□□□□□ -0.93
SSX3-202ENST00000376893 HMGB1P09429 215 aaKnown RBP9.25□□□□□ -0.93
SSX3-202ENST00000376893 PXYLP1Q8TE99 480 aa9.25□□□□□ -0.93
SSX3-202ENST00000376893 RBM27Q9P2N5 1060 aaKnown RBP9.25□□□□□ -0.93
SSX3-202ENST00000376893 MAP3K7O43318 606 aa9.24□□□□□ -0.93
SSX3-202ENST00000376893 ABL2P42684 1182 aa9.24□□□□□ -0.93
SSX3-202ENST00000376893 SND1Q7KZF4 910 aaKnown RBP eCLIP9.24□□□□□ -0.93
SSX3-202ENST00000376893 LIMD1Q9UGP4 676 aa9.24□□□□□ -0.93
SSX3-202ENST00000376893 POM121CA8CG34 1229 aa9.23□□□□□ -0.93
SSX3-202ENST00000376893 SPTLC1O15269 473 aa9.23□□□□□ -0.93
SSX3-202ENST00000376893 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
SSX3-202ENST00000376893 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
SSX3-202ENST00000376893 CARMIL1Q5VZK9 1371 aa9.23□□□□□ -0.93
SSX3-202ENST00000376893 WASHC4Q2M389 1173 aa9.22□□□□□ -0.93
SSX3-202ENST00000376893 OCEL1Q9H607 264 aa9.22□□□□□ -0.93
SSX3-202ENST00000376893 ADGRG1Q9Y653 693 aa9.22□□□□□ -0.93
SSX3-202ENST00000376893 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
SSX3-202ENST00000376893 SLC34A2O95436 690 aa9.21□□□□□ -0.94
SSX3-202ENST00000376893 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.94
SSX3-202ENST00000376893 CFAP70Q5T0N1 1121 aa9.21□□□□□ -0.94
SSX3-202ENST00000376893 IER5LQ5T953 404 aa9.21□□□□□ -0.94
SSX3-202ENST00000376893 TBC1D2BQ9UPU7 963 aa9.21□□□□□ -0.94
SSX3-202ENST00000376893 PRXQ9BXM0 1461 aa9.21□□□□□ -0.94
SSX3-202ENST00000376893 IQGAP2Q13576 1575 aa9.2□□□□□ -0.94
SSX3-202ENST00000376893 TYW1BQ6NUM6 668 aa9.2□□□□□ -0.94
SSX3-202ENST00000376893 TTC13Q8NBP0 860 aa9.2□□□□□ -0.94
SSX3-202ENST00000376893 SLAIN1Q8ND83 568 aa9.2□□□□□ -0.94
SSX3-202ENST00000376893 CTTNBP2Q8WZ74 1663 aa9.2□□□□□ -0.94
SSX3-202ENST00000376893 CLCN6P51797 869 aa9.19□□□□□ -0.94
SSX3-202ENST00000376893 L3MBTL3Q96JM7 780 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms