RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 TRPM1Q7Z4N2 1603 aa14.99□□□□□ -0.01
PDPN-203ENST00000376061 RGL3Q3MIN7 710 aa14.98□□□□□ -0.01
PDPN-203ENST00000376061 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
PDPN-203ENST00000376061 MYOM2P54296 1465 aa14.97□□□□□ -0.01
PDPN-203ENST00000376061 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
PDPN-203ENST00000376061 NBPF8Q3BBV2 869 aa14.97□□□□□ -0.01
PDPN-203ENST00000376061 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.01
PDPN-203ENST00000376061 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.02
PDPN-203ENST00000376061 SLC52A1Q9NWF4 448 aa14.96□□□□□ -0.02
PDPN-203ENST00000376061 NEXMIFQ5QGS0 1516 aa14.95□□□□□ -0.02
PDPN-203ENST00000376061 TNRQ92752 1358 aa14.95□□□□□ -0.02
PDPN-203ENST00000376061 MYO3AQ8NEV4 1616 aa14.94□□□□□ -0.02
PDPN-203ENST00000376061 UBR1Q8IWV7 1749 aa14.94□□□□□ -0.02
PDPN-203ENST00000376061 IDI1Q13907 227 aa14.94□□□□□ -0.02
PDPN-203ENST00000376061 KIAA1210Q9ULL0 1709 aa14.93□□□□□ -0.02
PDPN-203ENST00000376061 KDM2AQ9Y2K7 1162 aa14.93□□□□□ -0.02
PDPN-203ENST00000376061 NRXN1Q9ULB1 1477 aa14.92□□□□□ -0.02
PDPN-203ENST00000376061 LAMC1P11047 1609 aa14.92□□□□□ -0.02
PDPN-203ENST00000376061 CHGAP10645 457 aaKnown RBP14.92□□□□□ -0.02
PDPN-203ENST00000376061 ZNF326Q5BKZ1 582 aaKnown RBP14.92□□□□□ -0.02
PDPN-203ENST00000376061 A2ML1A8K2U0 1454 aa14.92□□□□□ -0.02
PDPN-203ENST00000376061 NLRP1Q9C000 1473 aa14.92□□□□□ -0.02
PDPN-203ENST00000376061 CEBPAP49715 358 aaPredicted RBP14.9□□□□□ -0.02
PDPN-203ENST00000376061 ZNF142P52746 1687 aaPredicted RBP14.89□□□□□ -0.03
PDPN-203ENST00000376061 RPGRIP1LQ68CZ1 1315 aa14.88□□□□□ -0.03
PDPN-203ENST00000376061 STAC3Q96MF2 364 aa14.88□□□□□ -0.03
PDPN-203ENST00000376061 NPM3O75607 178 aaKnown RBP14.87□□□□□ -0.03
PDPN-203ENST00000376061 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
PDPN-203ENST00000376061 IQGAP1P46940 1657 aa14.86□□□□□ -0.03
PDPN-203ENST00000376061 CEP170BQ9Y4F5 1589 aaPredicted RBP14.86□□□□□ -0.03
PDPN-203ENST00000376061 PTPRMP28827 1452 aa14.86□□□□□ -0.03
PDPN-203ENST00000376061 ZFYVE9O95405 1425 aa14.86□□□□□ -0.03
PDPN-203ENST00000376061 GPRASP1Q5JY77 1395 aa14.86□□□□□ -0.03
PDPN-203ENST00000376061 ZNF316A6NFI3 1004 aaPredicted RBP14.85□□□□□ -0.03
PDPN-203ENST00000376061 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
PDPN-203ENST00000376061 ADGRF5Q8IZF2 1346 aa14.85□□□□□ -0.03
PDPN-203ENST00000376061 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.03
PDPN-203ENST00000376061 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
PDPN-203ENST00000376061 RIMS2Q9UQ26 1411 aa14.83□□□□□ -0.04
PDPN-203ENST00000376061 USP47Q96K76 1375 aa14.82□□□□□ -0.04
PDPN-203ENST00000376061 SETD1AO15047 1707 aaKnown RBP14.82□□□□□ -0.04
PDPN-203ENST00000376061 POLR1AO95602 1720 aaPredicted RBP14.82□□□□□ -0.04
PDPN-203ENST00000376061 SETD1BQ9UPS6 1966 aaKnown RBP14.82□□□□□ -0.04
PDPN-203ENST00000376061 SLIT1O75093 1534 aa14.81□□□□□ -0.04
PDPN-203ENST00000376061 NRXN3Q9Y4C0 1643 aa14.81□□□□□ -0.04
PDPN-203ENST00000376061 ADGRB1O14514 1584 aa14.8□□□□□ -0.04
PDPN-203ENST00000376061 EIF4G2P78344 907 aaKnown RBP eCLIP14.8□□□□□ -0.04
PDPN-203ENST00000376061 NBPF1Q3BBV0 1214 aa14.8□□□□□ -0.04
PDPN-203ENST00000376061 ARHGAP23Q9P227 1491 aa14.8□□□□□ -0.04
PDPN-203ENST00000376061 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
PDPN-203ENST00000376061 VGFO15240 615 aaPredicted RBP14.79□□□□□ -0.04
PDPN-203ENST00000376061 HSPA5P11021 654 aaKnown RBP14.79□□□□□ -0.04
PDPN-203ENST00000376061 DSG3P32926 999 aa14.79□□□□□ -0.04
PDPN-203ENST00000376061 CARD11Q9BXL7 1154 aa14.79□□□□□ -0.04
PDPN-203ENST00000376061 TMEM2Q9UHN6 1383 aa14.79□□□□□ -0.04
PDPN-203ENST00000376061 NUTM2DQ5VT03 806 aaPredicted RBP14.78□□□□□ -0.04
PDPN-203ENST00000376061 HIRIP3Q9BW71 556 aaPredicted RBP14.77□□□□□ -0.04
PDPN-203ENST00000376061 ALKQ9UM73 1620 aa14.77□□□□□ -0.05
PDPN-203ENST00000376061 SCAF11Q99590 1463 aaKnown RBP14.76□□□□□ -0.05
PDPN-203ENST00000376061 CAPN15O75808 1086 aa14.76□□□□□ -0.05
PDPN-203ENST00000376061 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
PDPN-203ENST00000376061 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
PDPN-203ENST00000376061 ARHGEF28Q8N1W1 1705 aaKnown RBP14.75□□□□□ -0.05
PDPN-203ENST00000376061 C14orf93Q9H972 538 aaKnown RBP14.74□□□□□ -0.05
PDPN-203ENST00000376061 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
PDPN-203ENST00000376061 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.73□□□□□ -0.05
PDPN-203ENST00000376061 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
PDPN-203ENST00000376061 QRICH2Q9H0J4 1663 aa14.71□□□□□ -0.05
PDPN-203ENST00000376061 PLEKHG1Q9ULL1 1385 aa14.7□□□□□ -0.06
PDPN-203ENST00000376061 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
PDPN-203ENST00000376061 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
PDPN-203ENST00000376061 EIF3AQ14152 1382 aaKnown RBP14.69□□□□□ -0.06
PDPN-203ENST00000376061 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
PDPN-203ENST00000376061 ST20-MTHFSA0A0A6YYL1 179 aa14.69□□□□□ -0.06
PDPN-203ENST00000376061 LTKP29376 864 aa14.69□□□□□ -0.06
PDPN-203ENST00000376061 HDGFP51858 240 aaKnown RBP14.69□□□□□ -0.06
PDPN-203ENST00000376061 ADAMTS13Q76LX8 1427 aa14.69□□□□□ -0.06
PDPN-203ENST00000376061 MED14O60244 1454 aa14.68□□□□□ -0.06
PDPN-203ENST00000376061 TMEM132EQ6IEE7 984 aa14.67□□□□□ -0.06
PDPN-203ENST00000376061 TXNDC2Q86VQ3 553 aa14.67□□□□□ -0.06
PDPN-203ENST00000376061 CCDC7Q96M83 1385 aa14.67□□□□□ -0.06
PDPN-203ENST00000376061 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
PDPN-203ENST00000376061 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
PDPN-203ENST00000376061 EID1Q9Y6B2 187 aa14.66□□□□□ -0.06
PDPN-203ENST00000376061 DLC1Q96QB1 1528 aa14.65□□□□□ -0.06
PDPN-203ENST00000376061 C11orf95C9JLR9 678 aaPredicted RBP14.65□□□□□ -0.06
PDPN-203ENST00000376061 CPS1P31327 1500 aa14.64□□□□□ -0.07
PDPN-203ENST00000376061 TESK2Q96S53 571 aa14.64□□□□□ -0.07
PDPN-203ENST00000376061 METP08581 1390 aa14.63□□□□□ -0.07
PDPN-203ENST00000376061 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
PDPN-203ENST00000376061 KIF7Q2M1P5 1343 aa14.63□□□□□ -0.07
PDPN-203ENST00000376061 DISP3Q9P2K9 1392 aa14.63□□□□□ -0.07
PDPN-203ENST00000376061 SBNO2Q9Y2G9 1366 aa14.63□□□□□ -0.07
PDPN-203ENST00000376061 DIEXFQ68CQ4 756 aaKnown RBP14.62□□□□□ -0.07
PDPN-203ENST00000376061 TRAK1Q9UPV9 953 aa14.62□□□□□ -0.07
PDPN-203ENST00000376061 LMTK3Q96Q04 1460 aa14.62□□□□□ -0.07
PDPN-203ENST00000376061 XRN1Q8IZH2 1706 aaKnown RBP14.62□□□□□ -0.07
PDPN-203ENST00000376061 TECPR2O15040 1411 aa14.61□□□□□ -0.07
PDPN-203ENST00000376061 CENPJQ9HC77 1338 aaPredicted RBP14.61□□□□□ -0.07
PDPN-203ENST00000376061 MYOM1P52179 1685 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms