RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 BRD4O60885 1362 aaPredicted RBP16.96■□□□□ 0.31
C9orf47-203ENST00000375851 DNMBPQ6XZF7 1577 aa16.96■□□□□ 0.3
C9orf47-203ENST00000375851 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
C9orf47-203ENST00000375851 DZIP1LQ8IYY4 767 aaKnown RBP16.95■□□□□ 0.3
C9orf47-203ENST00000375851 PTMSP20962 102 aa16.95■□□□□ 0.3
C9orf47-203ENST00000375851 GNL2Q13823 731 aaKnown RBP16.95■□□□□ 0.3
C9orf47-203ENST00000375851 FOXD4L1Q9NU39 408 aa16.94■□□□□ 0.3
C9orf47-203ENST00000375851 MTHFSP49914 203 aa16.94■□□□□ 0.3
C9orf47-203ENST00000375851 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
C9orf47-203ENST00000375851 HMOX1P09601 288 aa16.93■□□□□ 0.3
C9orf47-203ENST00000375851 PSME1Q06323 249 aa16.92■□□□□ 0.3
C9orf47-203ENST00000375851 API5Q9BZZ5 524 aaKnown RBP16.92■□□□□ 0.3
C9orf47-203ENST00000375851 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
C9orf47-203ENST00000375851 MSNP26038 577 aaKnown RBP16.92■□□□□ 0.3
C9orf47-203ENST00000375851 EIF2S2P20042 333 aaKnown RBP16.91■□□□□ 0.3
C9orf47-203ENST00000375851 ST18O60284 1047 aa16.91■□□□□ 0.3
C9orf47-203ENST00000375851 ISY1Q9ULR0 285 aaKnown RBP16.91■□□□□ 0.3
C9orf47-203ENST00000375851 ABCA10Q8WWZ4 1543 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 BICRAQ9NZM4 1560 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.9■□□□□ 0.3
C9orf47-203ENST00000375851 KIAA0586Q9BVV6 1533 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 PPP2R1AP30153 589 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 RILPL2Q969X0 211 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 DAPK1P53355 1430 aa16.9■□□□□ 0.3
C9orf47-203ENST00000375851 PLEKHH2Q8IVE3 1493 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 GNAI1P63096 354 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 DRC7Q8IY82 874 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 CDCA7LQ96GN5 454 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 TCP11L2Q8N4U5 519 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 NECTIN2Q92692 538 aa16.89■□□□□ 0.29
C9orf47-203ENST00000375851 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
C9orf47-203ENST00000375851 HTATSF1O43719 755 aaKnown RBP16.87■□□□□ 0.29
C9orf47-203ENST00000375851 NAIPQ13075 1403 aa16.87■□□□□ 0.29
C9orf47-203ENST00000375851 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
C9orf47-203ENST00000375851 SLC12A5Q9H2X9 1139 aa16.87■□□□□ 0.29
C9orf47-203ENST00000375851 SYAP1Q96A49 352 aaPredicted RBP16.87■□□□□ 0.29
C9orf47-203ENST00000375851 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
C9orf47-203ENST00000375851 CDK13Q14004 1512 aaKnown RBP16.86■□□□□ 0.29
C9orf47-203ENST00000375851 HSP90B1P14625 803 aaKnown RBP16.86■□□□□ 0.29
C9orf47-203ENST00000375851 FKBP5Q13451 457 aaPredicted RBP16.86■□□□□ 0.29
C9orf47-203ENST00000375851 NEXNQ0ZGT2 675 aa16.85■□□□□ 0.29
C9orf47-203ENST00000375851 C9orf78Q9NZ63 289 aaPredicted RBP16.85■□□□□ 0.29
C9orf47-203ENST00000375851 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
C9orf47-203ENST00000375851 EVA1CP58658 441 aa16.85■□□□□ 0.29
C9orf47-203ENST00000375851 TTC5Q8N0Z6 440 aa16.85■□□□□ 0.29
C9orf47-203ENST00000375851 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
C9orf47-203ENST00000375851 PRAM1Q96QH2 718 aa16.85■□□□□ 0.29
C9orf47-203ENST00000375851 GOLGA6L3A6NEY3 463 aa16.84■□□□□ 0.29
C9orf47-203ENST00000375851 RAPGEF3O95398 923 aa16.84■□□□□ 0.29
C9orf47-203ENST00000375851 NLRP6P59044 892 aa16.84■□□□□ 0.29
C9orf47-203ENST00000375851 CHAF1AQ13111 956 aaPredicted RBP16.84■□□□□ 0.29
C9orf47-203ENST00000375851 TSPYL4Q9UJ04 414 aa16.84■□□□□ 0.29
C9orf47-203ENST00000375851 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.28
C9orf47-203ENST00000375851 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
C9orf47-203ENST00000375851 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
C9orf47-203ENST00000375851 PNISRQ8TF01 805 aaKnown RBP16.82■□□□□ 0.28
C9orf47-203ENST00000375851 SUPT6HQ7KZ85 1726 aaKnown RBP16.82■□□□□ 0.28
C9orf47-203ENST00000375851 FOXD4L5Q5VV16 416 aaPredicted RBP16.81■□□□□ 0.28
C9orf47-203ENST00000375851 FOXD4L4Q8WXT5 416 aaPredicted RBP16.81■□□□□ 0.28
C9orf47-203ENST00000375851 ROCK1Q13464 1354 aa16.8■□□□□ 0.28
C9orf47-203ENST00000375851 LNPKQ9C0E8 428 aa16.8■□□□□ 0.28
C9orf47-203ENST00000375851 FANCIQ9NVI1 1328 aa16.8■□□□□ 0.28
C9orf47-203ENST00000375851 USP35Q9P2H5 1018 aa16.8■□□□□ 0.28
C9orf47-203ENST00000375851 FRAT2O75474 233 aaPredicted RBP16.79■□□□□ 0.28
C9orf47-203ENST00000375851 TOMM22Q9NS69 142 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 REC8O95072 547 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 PRKAR2BP31323 418 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 AAMPQ13685 434 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 DIAPH3Q9NSV4 1193 aa16.79■□□□□ 0.28
C9orf47-203ENST00000375851 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
C9orf47-203ENST00000375851 CCDC184Q52MB2 194 aa16.78■□□□□ 0.28
C9orf47-203ENST00000375851 RAPGEF4Q8WZA2 1011 aa16.78■□□□□ 0.28
C9orf47-203ENST00000375851 TMX4Q9H1E5 349 aaPredicted RBP16.78■□□□□ 0.28
C9orf47-203ENST00000375851 IQGAP2Q13576 1575 aa16.78■□□□□ 0.28
C9orf47-203ENST00000375851 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
C9orf47-203ENST00000375851 CSPP1Q1MSJ5 1256 aa16.77■□□□□ 0.28
C9orf47-203ENST00000375851 LAMC3Q9Y6N6 1575 aa16.76■□□□□ 0.27
C9orf47-203ENST00000375851 ATF3P18847 181 aa16.76■□□□□ 0.27
C9orf47-203ENST00000375851 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
C9orf47-203ENST00000375851 KIF3AQ9Y496 699 aa16.76■□□□□ 0.27
C9orf47-203ENST00000375851 PCF11O94913 1555 aaKnown RBP16.76■□□□□ 0.27
C9orf47-203ENST00000375851 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
C9orf47-203ENST00000375851 NLRP2Q9NX02 1062 aa16.75■□□□□ 0.27
C9orf47-203ENST00000375851 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
C9orf47-203ENST00000375851 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
C9orf47-203ENST00000375851 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
C9orf47-203ENST00000375851 PLB1Q6P1J6 1458 aa16.75■□□□□ 0.27
C9orf47-203ENST00000375851 IFIT2P09913 472 aaKnown RBP16.75■□□□□ 0.27
C9orf47-203ENST00000375851 RUFY2Q8WXA3 655 aa16.75■□□□□ 0.27
C9orf47-203ENST00000375851 ERBINQ96RT1 1412 aa16.74■□□□□ 0.27
C9orf47-203ENST00000375851 ABTB2Q8N961 1025 aa16.74■□□□□ 0.27
C9orf47-203ENST00000375851 MAGI1Q96QZ7 1491 aaPredicted RBP16.74■□□□□ 0.27
C9orf47-203ENST00000375851 ANKRD30BQ9BXX2 1392 aa16.74■□□□□ 0.27
C9orf47-203ENST00000375851 DDX49Q9Y6V7 483 aaKnown RBP16.73■□□□□ 0.27
C9orf47-203ENST00000375851 G3BP1Q13283 466 aaKnown RBP eCLIP16.72■□□□□ 0.27
C9orf47-203ENST00000375851 CCDC34Q96HJ3 373 aa16.72■□□□□ 0.27
C9orf47-203ENST00000375851 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms