RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 UNC13BO14795 1591 aa35.68■■■■□ 3.3
C9orf47-202ENST00000375850 BCANQ96GW7 911 aa35.68■■■■□ 3.3
C9orf47-202ENST00000375850 ZFYVE9O95405 1425 aa35.67■■■■□ 3.3
C9orf47-202ENST00000375850 PLEKHG1Q9ULL1 1385 aa35.67■■■■□ 3.3
C9orf47-202ENST00000375850 NWD1Q149M9 1564 aa35.66■■■■□ 3.3
C9orf47-202ENST00000375850 SENP3Q9H4L4 574 aaPredicted RBP35.65■■■■□ 3.3
C9orf47-202ENST00000375850 GCC2Q8IWJ2 1684 aa35.65■■■■□ 3.3
C9orf47-202ENST00000375850 PPP1R15AO75807 674 aaPredicted RBP35.63■■■■□ 3.29
C9orf47-202ENST00000375850 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.63■■■■□ 3.29
C9orf47-202ENST00000375850 RIMS2Q9UQ26 1411 aa35.63■■■■□ 3.29
C9orf47-202ENST00000375850 TMEM131LA2VDJ0 1609 aa35.58■■■■□ 3.29
C9orf47-202ENST00000375850 MSH6P52701 1360 aa35.58■■■■□ 3.29
C9orf47-202ENST00000375850 TBX22Q9Y458 520 aa35.56■■■■□ 3.28
C9orf47-202ENST00000375850 IQGAP3Q86VI3 1631 aa35.54■■■■□ 3.28
C9orf47-202ENST00000375850 NCOA3Q9Y6Q9 1424 aa35.52■■■■□ 3.28
C9orf47-202ENST00000375850 NUP155O75694 1391 aa35.51■■■■□ 3.28
C9orf47-202ENST00000375850 CHGAP10645 457 aaKnown RBP35.51■■■■□ 3.28
C9orf47-202ENST00000375850 E9PCH4 1651 aa35.5■■■■□ 3.27
C9orf47-202ENST00000375850 RBM33Q96EV2 1170 aaKnown RBP35.48■■■■□ 3.27
C9orf47-202ENST00000375850 PIK3R4Q99570 1358 aa35.48■■■■□ 3.27
C9orf47-202ENST00000375850 ROBO1Q9Y6N7 1651 aa35.46■■■■□ 3.27
C9orf47-202ENST00000375850 DIP2AQ14689 1571 aa35.46■■■■□ 3.27
C9orf47-202ENST00000375850 MYO5BQ9ULV0 1848 aa35.46■■■■□ 3.27
C9orf47-202ENST00000375850 SLAIN2Q9P270 581 aa35.45■■■■□ 3.27
C9orf47-202ENST00000375850 CHD2O14647 1828 aaKnown RBP35.44■■■■□ 3.26
C9orf47-202ENST00000375850 ITGAEP38570 1179 aa35.42■■■■□ 3.26
C9orf47-202ENST00000375850 ADAMTS13Q76LX8 1427 aa35.41■■■■□ 3.26
C9orf47-202ENST00000375850 RGS17Q9UGC6 210 aaPredicted RBP35.36■■■■□ 3.25
C9orf47-202ENST00000375850 C14orf37Q86TY3 774 aa35.34■■■■□ 3.25
C9orf47-202ENST00000375850 NUTM2DQ5VT03 806 aaPredicted RBP35.33■■■■□ 3.25
C9orf47-202ENST00000375850 CADPS2Q86UW7 1296 aa35.33■■■■□ 3.25
C9orf47-202ENST00000375850 TRPM2O94759 1503 aa35.32■■■■□ 3.25
C9orf47-202ENST00000375850 C19orf44Q9H6X5 657 aa35.32■■■■□ 3.24
C9orf47-202ENST00000375850 JCADQ9P266 1359 aa35.31■■■■□ 3.24
C9orf47-202ENST00000375850 ATF3P18847 181 aa35.27■■■■□ 3.24
C9orf47-202ENST00000375850 AMOTL2Q9Y2J4 779 aa35.25■■■■□ 3.23
C9orf47-202ENST00000375850 PHLPP1O60346 1717 aa35.25■■■■□ 3.23
C9orf47-202ENST00000375850 PPARGC1BQ86YN6 1023 aaKnown RBP35.24■■■■□ 3.23
C9orf47-202ENST00000375850 RRBP1Q9P2E9 1410 aaKnown RBP35.23■■■■□ 3.23
C9orf47-202ENST00000375850 SPHKAPQ2M3C7 1700 aa35.22■■■■□ 3.23
C9orf47-202ENST00000375850 SETBP1Q9Y6X0 1596 aa35.21■■■■□ 3.23
C9orf47-202ENST00000375850 ZNF326Q5BKZ1 582 aaKnown RBP35.2■■■■□ 3.23
C9orf47-202ENST00000375850 DCCP43146 1447 aa35.2■■■■□ 3.23
C9orf47-202ENST00000375850 PTPRUQ92729 1446 aa35.18■■■■□ 3.22
C9orf47-202ENST00000375850 SPATA31A6Q5VVP1 1343 aa35.17■■■■□ 3.22
C9orf47-202ENST00000375850 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.17■■■■□ 3.22
C9orf47-202ENST00000375850 COL16A1Q07092 1604 aaPredicted RBP35.17■■■■□ 3.22
C9orf47-202ENST00000375850 POTEAQ6S8J7 498 aa35.16■■■■□ 3.22
C9orf47-202ENST00000375850 AHDC1Q5TGY3 1603 aaPredicted RBP35.14■■■■□ 3.22
C9orf47-202ENST00000375850 NAIPQ13075 1403 aa35.14■■■■□ 3.22
C9orf47-202ENST00000375850 NRXN3Q9Y4C0 1643 aa35.11■■■■□ 3.21
C9orf47-202ENST00000375850 XRN1Q8IZH2 1706 aaKnown RBP35.1■■■■□ 3.21
C9orf47-202ENST00000375850 BRINP3Q76B58 766 aa35.06■■■■□ 3.2
C9orf47-202ENST00000375850 METP08581 1390 aa35.05■■■■□ 3.2
C9orf47-202ENST00000375850 CLTCL1P53675 1640 aa35.05■■■■□ 3.2
C9orf47-202ENST00000375850 NEXMIFQ5QGS0 1516 aa35.05■■■■□ 3.2
C9orf47-202ENST00000375850 HFM1A2PYH4 1435 aa35.03■■■■□ 3.2
C9orf47-202ENST00000375850 VGFO15240 615 aaPredicted RBP35■■■■□ 3.19
C9orf47-202ENST00000375850 MEX3CQ5U5Q3 659 aaKnown RBP35■■■■□ 3.19
C9orf47-202ENST00000375850 SHPRHQ149N8 1683 aa34.99■■■■□ 3.19
C9orf47-202ENST00000375850 ZNF772Q68DY9 489 aaPredicted RBP34.99■■■■□ 3.19
C9orf47-202ENST00000375850 MST1RQ04912 1400 aa34.98■■■■□ 3.19
C9orf47-202ENST00000375850 ADGRL3Q9HAR2 1447 aa34.98■■■■□ 3.19
C9orf47-202ENST00000375850 TRIM52Q96A61 297 aa34.98■■■■□ 3.19
C9orf47-202ENST00000375850 ASXL1Q8IXJ9 1541 aa34.97■■■■□ 3.19
C9orf47-202ENST00000375850 LRP6O75581 1613 aa34.97■■■■□ 3.19
C9orf47-202ENST00000375850 RPGRIP1LQ68CZ1 1315 aa34.97■■■■□ 3.19
C9orf47-202ENST00000375850 KIF1BO60333 1816 aa34.96■■■■□ 3.19
C9orf47-202ENST00000375850 SETD5Q9C0A6 1442 aa34.94■■■■□ 3.18
C9orf47-202ENST00000375850 SLC4A1APQ9BWU0 796 aaKnown RBP34.93■■■■□ 3.18
C9orf47-202ENST00000375850 PTCH1Q13635 1447 aa34.91■■■■□ 3.18
C9orf47-202ENST00000375850 LRRC59Q96AG4 307 aaKnown RBP34.91■■■■□ 3.18
C9orf47-202ENST00000375850 PRAG1Q86YV5 1406 aa34.88■■■■□ 3.17
C9orf47-202ENST00000375850 NHSL1Q5SYE7 1610 aa34.85■■■■□ 3.17
C9orf47-202ENST00000375850 NALCNQ8IZF0 1738 aa34.81■■■■□ 3.16
C9orf47-202ENST00000375850 NUTM2BA6NNL0 878 aaPredicted RBP34.8■■■■□ 3.16
C9orf47-202ENST00000375850 NUTM2EB1AL46 878 aaPredicted RBP34.8■■■■□ 3.16
C9orf47-202ENST00000375850 NUTM2AQ8IVF1 878 aaPredicted RBP34.8■■■■□ 3.16
C9orf47-202ENST00000375850 C1orf167Q5SNV9 1468 aa34.78■■■■□ 3.16
C9orf47-202ENST00000375850 ROBO2Q9HCK4 1378 aa34.78■■■■□ 3.16
C9orf47-202ENST00000375850 RXRBP28702 533 aa34.76■■■■□ 3.16
C9orf47-202ENST00000375850 SETD1AO15047 1707 aaKnown RBP34.75■■■■□ 3.15
C9orf47-202ENST00000375850 PNPLA6Q8IY17 1366 aa34.74■■■■□ 3.15
C9orf47-202ENST00000375850 CDK12Q9NYV4 1490 aaPredicted RBP34.73■■■■□ 3.15
C9orf47-202ENST00000375850 ACIN1Q9UKV3 1341 aaKnown RBP34.72■■■■□ 3.15
C9orf47-202ENST00000375850 CCDC144AA2RUR9 1427 aa34.72■■■■□ 3.15
C9orf47-202ENST00000375850 AFF2P51816 1311 aa34.71■■■■□ 3.15
C9orf47-202ENST00000375850 PPLO60437 1756 aa34.7■■■■□ 3.15
C9orf47-202ENST00000375850 LAMC1P11047 1609 aa34.7■■■■□ 3.14
C9orf47-202ENST00000375850 DDX17Q92841 729 aaKnown RBP34.68■■■■□ 3.14
C9orf47-202ENST00000375850 SOS2Q07890 1332 aaPredicted RBP34.67■■■■□ 3.14
C9orf47-202ENST00000375850 ANKRD30BQ9BXX2 1392 aa34.66■■■■□ 3.14
C9orf47-202ENST00000375850 C8orf37Q96NL8 207 aa34.63■■■■□ 3.13
C9orf47-202ENST00000375850 ORAI2Q96SN7 254 aa34.63■■■■□ 3.13
C9orf47-202ENST00000375850 FOXD1Q16676 465 aa34.62■■■■□ 3.13
C9orf47-202ENST00000375850 MPHOSPH9Q99550 1183 aa34.62■■■■□ 3.13
C9orf47-202ENST00000375850 SPATA31E1Q6ZUB1 1445 aa34.62■■■■□ 3.13
C9orf47-202ENST00000375850 UPF1Q92900 1129 aaKnown RBP eCLIP34.61■■■■□ 3.13
C9orf47-202ENST00000375850 ADGRF5Q8IZF2 1346 aa34.59■■■■□ 3.13
C9orf47-202ENST00000375850 CDC42BPGQ6DT37 1551 aa34.59■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms