RNA–Protein interactions for RNA: ENST00000375641.6

C6orf48-206, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C6orf48, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-206ENST00000375641 ZFYVE9O95405 1425 aa28.7■■■□□ 2.19
C6orf48-206ENST00000375641 UNC13BO14795 1591 aa28.7■■■□□ 2.18
C6orf48-206ENST00000375641 ITGAEP38570 1179 aa28.69■■■□□ 2.18
C6orf48-206ENST00000375641 PPARGC1BQ86YN6 1023 aaKnown RBP28.69■■■□□ 2.18
C6orf48-206ENST00000375641 PHF23Q9BUL5 403 aaPredicted RBP28.69■■■□□ 2.18
C6orf48-206ENST00000375641 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
C6orf48-206ENST00000375641 RIMS2Q9UQ26 1411 aa28.68■■■□□ 2.18
C6orf48-206ENST00000375641 PLEKHG1Q9ULL1 1385 aa28.67■■■□□ 2.18
C6orf48-206ENST00000375641 PPP1R15AO75807 674 aaPredicted RBP28.67■■■□□ 2.18
C6orf48-206ENST00000375641 CHGAP10645 457 aaKnown RBP28.67■■■□□ 2.18
C6orf48-206ENST00000375641 GCC2Q8IWJ2 1684 aa28.65■■■□□ 2.18
C6orf48-206ENST00000375641 TMEM131LA2VDJ0 1609 aa28.65■■■□□ 2.18
C6orf48-206ENST00000375641 NUP155O75694 1391 aa28.63■■■□□ 2.17
C6orf48-206ENST00000375641 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.63■■■□□ 2.172e-28■■□□□ 14
C6orf48-206ENST00000375641 NKTRP30414 1462 aaKnown RBP28.62■■■□□ 2.17
C6orf48-206ENST00000375641 NWD1Q149M9 1564 aa28.62■■■□□ 2.17
C6orf48-206ENST00000375641 TBX22Q9Y458 520 aa28.61■■■□□ 2.17
C6orf48-206ENST00000375641 MYO5BQ9ULV0 1848 aa28.61■■■□□ 2.17
C6orf48-206ENST00000375641 E9PCH4 1651 aa28.61■■■□□ 2.17
C6orf48-206ENST00000375641 IQGAP3Q86VI3 1631 aa28.59■■■□□ 2.17
C6orf48-206ENST00000375641 NUTM2DQ5VT03 806 aaPredicted RBP28.59■■■□□ 2.17
C6orf48-206ENST00000375641 MSH6P52701 1360 aa28.56■■■□□ 2.16
C6orf48-206ENST00000375641 SLAIN2Q9P270 581 aa28.54■■■□□ 2.16
C6orf48-206ENST00000375641 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
C6orf48-206ENST00000375641 CHD2O14647 1828 aaKnown RBP28.52■■■□□ 2.16
C6orf48-206ENST00000375641 RGS17Q9UGC6 210 aaPredicted RBP28.51■■■□□ 2.15
C6orf48-206ENST00000375641 ROBO1Q9Y6N7 1651 aa28.5■■■□□ 2.15
C6orf48-206ENST00000375641 NCOA3Q9Y6Q9 1424 aa28.47■■■□□ 2.15
C6orf48-206ENST00000375641 PIK3R4Q99570 1358 aa28.46■■■□□ 2.15
C6orf48-206ENST00000375641 C14orf37Q86TY3 774 aa28.43■■■□□ 2.14
C6orf48-206ENST00000375641 DIP2AQ14689 1571 aa28.42■■■□□ 2.14
C6orf48-206ENST00000375641 AMOTL2Q9Y2J4 779 aa28.42■■■□□ 2.14
C6orf48-206ENST00000375641 C19orf44Q9H6X5 657 aa28.41■■■□□ 2.14
C6orf48-206ENST00000375641 RRBP1Q9P2E9 1410 aaKnown RBP28.4■■■□□ 2.14
C6orf48-206ENST00000375641 PTPRUQ92729 1446 aa28.38■■■□□ 2.13
C6orf48-206ENST00000375641 ZNF326Q5BKZ1 582 aaKnown RBP28.38■■■□□ 2.13
C6orf48-206ENST00000375641 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
C6orf48-206ENST00000375641 ATF3P18847 181 aa28.36■■■□□ 2.13
C6orf48-206ENST00000375641 TRPM2O94759 1503 aa28.36■■■□□ 2.13
C6orf48-206ENST00000375641 NAIPQ13075 1403 aa28.35■■■□□ 2.13
C6orf48-206ENST00000375641 SPHKAPQ2M3C7 1700 aa28.34■■■□□ 2.13
C6orf48-206ENST00000375641 JCADQ9P266 1359 aa28.34■■■□□ 2.13
C6orf48-206ENST00000375641 POTEAQ6S8J7 498 aa28.33■■■□□ 2.13
C6orf48-206ENST00000375641 PHLPP1O60346 1717 aa28.32■■■□□ 2.12
C6orf48-206ENST00000375641 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.3■■■□□ 2.12
C6orf48-206ENST00000375641 SETBP1Q9Y6X0 1596 aa28.29■■■□□ 2.12
C6orf48-206ENST00000375641 NRXN3Q9Y4C0 1643 aa28.28■■■□□ 2.12
C6orf48-206ENST00000375641 METP08581 1390 aa28.27■■■□□ 2.12
C6orf48-206ENST00000375641 TRIM52Q96A61 297 aa28.26■■■□□ 2.11
C6orf48-206ENST00000375641 CLTCL1P53675 1640 aa28.25■■■□□ 2.11
C6orf48-206ENST00000375641 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
C6orf48-206ENST00000375641 BRINP3Q76B58 766 aa28.24■■■□□ 2.11
C6orf48-206ENST00000375641 NEXMIFQ5QGS0 1516 aa28.22■■■□□ 2.11
C6orf48-206ENST00000375641 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
C6orf48-206ENST00000375641 SPATA31A6Q5VVP1 1343 aa28.2■■■□□ 2.11
C6orf48-206ENST00000375641 HFM1A2PYH4 1435 aa28.2■■■□□ 2.11
C6orf48-206ENST00000375641 DCCP43146 1447 aa28.2■■■□□ 2.11
C6orf48-206ENST00000375641 AHDC1Q5TGY3 1603 aaPredicted RBP28.2■■■□□ 2.1
C6orf48-206ENST00000375641 SLC4A1APQ9BWU0 796 aaKnown RBP28.18■■■□□ 2.1
C6orf48-206ENST00000375641 VGFO15240 615 aaPredicted RBP28.16■■■□□ 2.1
C6orf48-206ENST00000375641 MST1RQ04912 1400 aa28.14■■■□□ 2.1
C6orf48-206ENST00000375641 LRP6O75581 1613 aa28.14■■■□□ 2.09
C6orf48-206ENST00000375641 KIF1BO60333 1816 aa28.13■■■□□ 2.09
C6orf48-206ENST00000375641 MEX3CQ5U5Q3 659 aaKnown RBP28.13■■■□□ 2.09
C6orf48-206ENST00000375641 RPGRIP1LQ68CZ1 1315 aa28.12■■■□□ 2.09
C6orf48-206ENST00000375641 ADGRL3Q9HAR2 1447 aa28.1■■■□□ 2.09
C6orf48-206ENST00000375641 ASXL1Q8IXJ9 1541 aa28.1■■■□□ 2.09
C6orf48-206ENST00000375641 SHPRHQ149N8 1683 aa28.07■■■□□ 2.08
C6orf48-206ENST00000375641 ZNF772Q68DY9 489 aaPredicted RBP28.07■■■□□ 2.08
C6orf48-206ENST00000375641 NUTM2BA6NNL0 878 aaPredicted RBP28.06■■■□□ 2.08
C6orf48-206ENST00000375641 NUTM2EB1AL46 878 aaPredicted RBP28.06■■■□□ 2.08
C6orf48-206ENST00000375641 FOXD1Q16676 465 aa28.06■■■□□ 2.08
C6orf48-206ENST00000375641 NUTM2AQ8IVF1 878 aaPredicted RBP28.06■■■□□ 2.08
C6orf48-206ENST00000375641 SETD5Q9C0A6 1442 aa28.06■■■□□ 2.08
C6orf48-206ENST00000375641 LRRC59Q96AG4 307 aaKnown RBP28.05■■■□□ 2.08
C6orf48-206ENST00000375641 DDX17Q92841 729 aaKnown RBP28.04■■■□□ 2.08
C6orf48-206ENST00000375641 ROBO2Q9HCK4 1378 aa28.03■■■□□ 2.08
C6orf48-206ENST00000375641 PTCH1Q13635 1447 aa28.02■■■□□ 2.08
C6orf48-206ENST00000375641 NALCNQ8IZF0 1738 aa28■■■□□ 2.07
C6orf48-206ENST00000375641 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
C6orf48-206ENST00000375641 C1orf167Q5SNV9 1468 aa27.99■■■□□ 2.07
C6orf48-206ENST00000375641 SETD1AO15047 1707 aaKnown RBP27.98■■■□□ 2.07
C6orf48-206ENST00000375641 MPHOSPH9Q99550 1183 aa27.97■■■□□ 2.07
C6orf48-206ENST00000375641 PRAG1Q86YV5 1406 aa27.97■■■□□ 2.07
C6orf48-206ENST00000375641 RGL3Q3MIN7 710 aa27.95■■■□□ 2.06
C6orf48-206ENST00000375641 ORAI2Q96SN7 254 aa27.95■■■□□ 2.06
C6orf48-206ENST00000375641 ADGRF5Q8IZF2 1346 aa27.94■■■□□ 2.06
C6orf48-206ENST00000375641 PPLO60437 1756 aa27.94■■■□□ 2.06
C6orf48-206ENST00000375641 PNPLA6Q8IY17 1366 aa27.94■■■□□ 2.06
C6orf48-206ENST00000375641 CCDC144AA2RUR9 1427 aa27.93■■■□□ 2.06
C6orf48-206ENST00000375641 RXRBP28702 533 aa27.93■■■□□ 2.06
C6orf48-206ENST00000375641 AFF2P51816 1311 aa27.92■■■□□ 2.06
C6orf48-206ENST00000375641 SPATA31E1Q6ZUB1 1445 aa27.9■■■□□ 2.06
C6orf48-206ENST00000375641 SOS2Q07890 1332 aaPredicted RBP27.89■■■□□ 2.05
C6orf48-206ENST00000375641 C8orf37Q96NL8 207 aa27.88■■■□□ 2.05
C6orf48-206ENST00000375641 ANKRD30BQ9BXX2 1392 aa27.86■■■□□ 2.05
C6orf48-206ENST00000375641 STK26Q9P289 416 aa27.86■■■□□ 2.05
C6orf48-206ENST00000375641 UPF1Q92900 1129 aaKnown RBP eCLIP27.84■■■□□ 2.055e-22■□□□□ 9.9
C6orf48-206ENST00000375641 LAMC1P11047 1609 aa27.84■■■□□ 2.05
C6orf48-206ENST00000375641 ADAMTS2O95450 1211 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms