RNA–Protein interactions for RNA: ENST00000373184.5

PTPRT-202, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRT, Length 12,483 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-202ENST00000373184 DDX58O95786 925 aaKnown RBP7.37□□□□□ -1.23
PTPRT-202ENST00000373184 RSPH6AQ9H0K4 717 aa7.37□□□□□ -1.23
PTPRT-202ENST00000373184 HMGXB3Q12766 1538 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 HMGB2P26583 209 aaKnown RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 SPRYD3Q8NCJ5 442 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 FRAT2O75474 233 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 TCEAL9Q9UHQ7 104 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 KAT6BQ8WYB5 2073 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 CUL7Q14999 1698 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 SYNJ2O15056 1496 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 ARHGAP5Q13017 1502 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 JPH4Q96JJ6 628 aa7.36□□□□□ -1.23
PTPRT-202ENST00000373184 DHX8Q14562 1220 aaKnown RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 TNNT3P45378 269 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
PTPRT-202ENST00000373184 DHX57Q6P158 1386 aaKnown RBP7.35□□□□□ -1.23
PTPRT-202ENST00000373184 ERC2O15083 957 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 HFM1A2PYH4 1435 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 FOXD1Q16676 465 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 CCDC7Q96M83 1385 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 MARCH6O60337 910 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 FAM184AQ8NB25 1140 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TEFQ10587 303 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TOP2BQ02880 1626 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
PTPRT-202ENST00000373184 KIF7Q2M1P5 1343 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 BECN2A8MW95 431 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TRIM29Q14134 588 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 PKNOX2Q96KN3 472 aa7.35□□□□□ -1.23
PTPRT-202ENST00000373184 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
PTPRT-202ENST00000373184 SLC4A10Q6U841 1118 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 GRIN2BQ13224 1484 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 TRIM34Q9BYJ4 488 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 DAPK1P53355 1430 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 GNAI1P63096 354 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 LRRC9Q6ZRR7 1453 aa7.34□□□□□ -1.23
PTPRT-202ENST00000373184 RRP1P56182 461 aaKnown RBP7.34□□□□□ -1.24
PTPRT-202ENST00000373184 C9orf78Q9NZ63 289 aaPredicted RBP7.34□□□□□ -1.24
PTPRT-202ENST00000373184 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 HNRNPMP52272 730 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 TOMM22Q9NS69 142 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CPLX1O14810 134 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 TRDNQ13061 729 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 ST20-MTHFSA0A0A6YYL1 179 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CDR1P51861 262 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 ARID3AQ99856 593 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 BRD4O60885 1362 aaPredicted RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 RDXP35241 583 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NAT10Q9H0A0 1025 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 PANK3Q9H999 370 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NCAPD3P42695 1498 aa7.33□□□□□ -1.24
PTPRT-202ENST00000373184 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
PTPRT-202ENST00000373184 NUCB2P80303 420 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 VPS53Q5VIR6 699 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 INTS3Q68E01 1043 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 ACBD3Q9H3P7 528 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 PRKRIP1Q9H875 184 aaPredicted RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 IFIT2P09913 472 aaKnown RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 NCOA2Q15596 1464 aa7.32□□□□□ -1.24
PTPRT-202ENST00000373184 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.32□□□□□ -1.24
PTPRT-202ENST00000373184 CT47B1P0C2W7 299 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 PDE4CQ08493 712 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 BRMS1Q9HCU9 246 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 DIAPH1O60610 1272 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 ERICH2A1L162 156 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 SAFBQ15424 915 aaKnown RBP eCLIP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 TEX35Q5T0J7 233 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC141Q6ZP82 1450 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 HIP1O00291 1037 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 DZIP1LQ8IYY4 767 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 FBXO3Q9UK99 471 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 MTERF4Q7Z6M4 381 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 PDIA4P13667 645 aaKnown RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 CCP110O43303 1012 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 RUNDC1Q96C34 613 aa7.31□□□□□ -1.24
PTPRT-202ENST00000373184 GZF1Q9H116 711 aaPredicted RBP7.31□□□□□ -1.24
PTPRT-202ENST00000373184 VPS37DQ86XT2 251 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 G3BP1Q13283 466 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 OSCARQ8IYS5 282 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 ARGLU1Q9NWB6 273 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 XBP1P17861 261 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC146Q8IYE0 955 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 CTDP1Q9Y5B0 961 aaPredicted RBP7.3□□□□□ -1.24
PTPRT-202ENST00000373184 MYO6Q9UM54 1294 aa7.3□□□□□ -1.24
PTPRT-202ENST00000373184 MCM2P49736 904 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DDX49Q9Y6V7 483 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 PDCP20941 246 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 PIP4K2AP48426 406 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 SART3Q15020 963 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DHX16O60231 1041 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 CLUAP1Q96AJ1 413 aa7.29□□□□□ -1.24
PTPRT-202ENST00000373184 CCDC43Q96MW1 224 aaKnown RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.29□□□□□ -1.24
PTPRT-202ENST00000373184 DNMBPQ6XZF7 1577 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms