RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 HDGFP51858 240 aaKnown RBP29.69■■■□□ 2.34
TRAPPC3-204ENST00000373166 SLAIN2Q9P270 581 aa29.68■■■□□ 2.34
TRAPPC3-204ENST00000373166 ROBO1Q9Y6N7 1651 aa29.68■■■□□ 2.34
TRAPPC3-204ENST00000373166 NWD1Q149M9 1564 aa29.65■■■□□ 2.34
TRAPPC3-204ENST00000373166 PPP1R15AO75807 674 aaPredicted RBP29.65■■■□□ 2.34
TRAPPC3-204ENST00000373166 ADGRL2O95490 1459 aa29.65■■■□□ 2.34
TRAPPC3-204ENST00000373166 RPRD2Q5VT52 1461 aaKnown RBP29.65■■■□□ 2.34
TRAPPC3-204ENST00000373166 FAM50AQ14320 339 aaKnown RBP29.63■■■□□ 2.33
TRAPPC3-204ENST00000373166 PLEKHG1Q9ULL1 1385 aa29.63■■■□□ 2.33
TRAPPC3-204ENST00000373166 ANKRD50Q9ULJ7 1429 aa29.62■■■□□ 2.33
TRAPPC3-204ENST00000373166 ZFYVE9O95405 1425 aa29.61■■■□□ 2.33
TRAPPC3-204ENST00000373166 RIMS2Q9UQ26 1411 aa29.59■■■□□ 2.33
TRAPPC3-204ENST00000373166 JCADQ9P266 1359 aa29.58■■■□□ 2.33
TRAPPC3-204ENST00000373166 TBX22Q9Y458 520 aa29.57■■■□□ 2.32
TRAPPC3-204ENST00000373166 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.56■■■□□ 2.32
TRAPPC3-204ENST00000373166 NCOA3Q9Y6Q9 1424 aa29.54■■■□□ 2.32
TRAPPC3-204ENST00000373166 CHGAP10645 457 aaKnown RBP29.53■■■□□ 2.32
TRAPPC3-204ENST00000373166 C14orf37Q86TY3 774 aa29.53■■■□□ 2.32
TRAPPC3-204ENST00000373166 PHLPP1O60346 1717 aa29.5■■■□□ 2.31
TRAPPC3-204ENST00000373166 TMEM131LA2VDJ0 1609 aa29.49■■■□□ 2.31
TRAPPC3-204ENST00000373166 CADPS2Q86UW7 1296 aa29.47■■■□□ 2.31
TRAPPC3-204ENST00000373166 CHD2O14647 1828 aaKnown RBP29.47■■■□□ 2.31
TRAPPC3-204ENST00000373166 C19orf44Q9H6X5 657 aa29.46■■■□□ 2.31
TRAPPC3-204ENST00000373166 GCC2Q8IWJ2 1684 aa29.45■■■□□ 2.31
TRAPPC3-204ENST00000373166 ATF3P18847 181 aa29.45■■■□□ 2.31
TRAPPC3-204ENST00000373166 NUTM2DQ5VT03 806 aaPredicted RBP29.45■■■□□ 2.31
TRAPPC3-204ENST00000373166 SPATA31A6Q5VVP1 1343 aa29.45■■■□□ 2.3
TRAPPC3-204ENST00000373166 PIK3R4Q99570 1358 aa29.44■■■□□ 2.3
TRAPPC3-204ENST00000373166 ADAMTS13Q76LX8 1427 aa29.43■■■□□ 2.3
TRAPPC3-204ENST00000373166 MEX3CQ5U5Q3 659 aaKnown RBP29.42■■■□□ 2.3
TRAPPC3-204ENST00000373166 COL16A1Q07092 1604 aaPredicted RBP29.41■■■□□ 2.3
TRAPPC3-204ENST00000373166 MYO5BQ9ULV0 1848 aa29.41■■■□□ 2.3
TRAPPC3-204ENST00000373166 ZNF772Q68DY9 489 aaPredicted RBP29.39■■■□□ 2.3
TRAPPC3-204ENST00000373166 UNC13BO14795 1591 aa29.39■■■□□ 2.29
TRAPPC3-204ENST00000373166 DIP2AQ14689 1571 aa29.38■■■□□ 2.29
TRAPPC3-204ENST00000373166 AMOTL2Q9Y2J4 779 aa29.37■■■□□ 2.29
TRAPPC3-204ENST00000373166 ROCK1Q13464 1354 aa29.36■■■□□ 2.29
TRAPPC3-204ENST00000373166 LRP6O75581 1613 aa29.34■■■□□ 2.29
TRAPPC3-204ENST00000373166 E9PCH4 1651 aa29.32■■■□□ 2.28
TRAPPC3-204ENST00000373166 AHDC1Q5TGY3 1603 aaPredicted RBP29.32■■■□□ 2.28
TRAPPC3-204ENST00000373166 NUP155O75694 1391 aa29.32■■■□□ 2.28
TRAPPC3-204ENST00000373166 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
TRAPPC3-204ENST00000373166 BRINP3Q76B58 766 aa29.31■■■□□ 2.28
TRAPPC3-204ENST00000373166 TRPM2O94759 1503 aa29.3■■■□□ 2.28
TRAPPC3-204ENST00000373166 SETD1AO15047 1707 aaKnown RBP29.3■■■□□ 2.28
TRAPPC3-204ENST00000373166 TRIM52Q96A61 297 aa29.28■■■□□ 2.28
TRAPPC3-204ENST00000373166 PTPRUQ92729 1446 aa29.28■■■□□ 2.28
TRAPPC3-204ENST00000373166 IQGAP3Q86VI3 1631 aa29.27■■■□□ 2.28
TRAPPC3-204ENST00000373166 NUTM2BA6NNL0 878 aaPredicted RBP29.25■■■□□ 2.27
TRAPPC3-204ENST00000373166 NUTM2EB1AL46 878 aaPredicted RBP29.25■■■□□ 2.27
TRAPPC3-204ENST00000373166 RXRBP28702 533 aa29.25■■■□□ 2.27
TRAPPC3-204ENST00000373166 NUTM2AQ8IVF1 878 aaPredicted RBP29.25■■■□□ 2.27
TRAPPC3-204ENST00000373166 UPF1Q92900 1129 aaKnown RBP eCLIP29.25■■■□□ 2.273e-20■■■□□ 17.9
TRAPPC3-204ENST00000373166 DCCP43146 1447 aa29.25■■■□□ 2.27
TRAPPC3-204ENST00000373166 SHPRHQ149N8 1683 aa29.24■■■□□ 2.27
TRAPPC3-204ENST00000373166 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
TRAPPC3-204ENST00000373166 ITGAEP38570 1179 aa29.22■■■□□ 2.27
TRAPPC3-204ENST00000373166 ZNF326Q5BKZ1 582 aaKnown RBP29.21■■■□□ 2.27
TRAPPC3-204ENST00000373166 ASXL1Q8IXJ9 1541 aa29.17■■■□□ 2.26
TRAPPC3-204ENST00000373166 LRRC59Q96AG4 307 aaKnown RBP29.17■■■□□ 2.26
TRAPPC3-204ENST00000373166 SETD5Q9C0A6 1442 aa29.17■■■□□ 2.26
TRAPPC3-204ENST00000373166 SETBP1Q9Y6X0 1596 aa29.16■■■□□ 2.26
TRAPPC3-204ENST00000373166 MST1RQ04912 1400 aa29.15■■■□□ 2.26
TRAPPC3-204ENST00000373166 AFF2P51816 1311 aa29.15■■■□□ 2.26
TRAPPC3-204ENST00000373166 METP08581 1390 aa29.14■■■□□ 2.26
TRAPPC3-204ENST00000373166 CDK12Q9NYV4 1490 aaPredicted RBP29.12■■■□□ 2.25
TRAPPC3-204ENST00000373166 XRN1Q8IZH2 1706 aaKnown RBP29.12■■■□□ 2.25
TRAPPC3-204ENST00000373166 NRXN3Q9Y4C0 1643 aa29.11■■■□□ 2.25
TRAPPC3-204ENST00000373166 ADGRL3Q9HAR2 1447 aa29.08■■■□□ 2.25
TRAPPC3-204ENST00000373166 C8orf37Q96NL8 207 aa29.07■■■□□ 2.24
TRAPPC3-204ENST00000373166 DDX17Q92841 729 aaKnown RBP29.06■■■□□ 2.24
TRAPPC3-204ENST00000373166 QTRT2Q9H974 415 aaKnown RBP29.05■■■□□ 2.24
TRAPPC3-204ENST00000373166 SPHKAPQ2M3C7 1700 aa29.04■■■□□ 2.24
TRAPPC3-204ENST00000373166 NHSL1Q5SYE7 1610 aa29.04■■■□□ 2.24
TRAPPC3-204ENST00000373166 PNPLA6Q8IY17 1366 aa29.03■■■□□ 2.24
TRAPPC3-204ENST00000373166 RBM6P78332 1123 aaKnown RBP29.03■■■□□ 2.24
TRAPPC3-204ENST00000373166 RRBP1Q9P2E9 1410 aaKnown RBP29.02■■■□□ 2.24
TRAPPC3-204ENST00000373166 NGLY1Q96IV0 654 aa28.98■■■□□ 2.23
TRAPPC3-204ENST00000373166 NEXMIFQ5QGS0 1516 aa28.98■■■□□ 2.23
TRAPPC3-204ENST00000373166 C1orf167Q5SNV9 1468 aa28.97■■■□□ 2.23
TRAPPC3-204ENST00000373166 VGFO15240 615 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC3-204ENST00000373166 ADAMTS2O95450 1211 aa28.96■■■□□ 2.23
TRAPPC3-204ENST00000373166 RGS12O14924 1447 aa28.95■■■□□ 2.23
TRAPPC3-204ENST00000373166 CLTCL1P53675 1640 aa28.94■■■□□ 2.22
TRAPPC3-204ENST00000373166 NALCNQ8IZF0 1738 aa28.92■■■□□ 2.22
TRAPPC3-204ENST00000373166 PTCH1Q13635 1447 aa28.92■■■□□ 2.22
TRAPPC3-204ENST00000373166 ORAI2Q96SN7 254 aa28.91■■■□□ 2.22
TRAPPC3-204ENST00000373166 SOS2Q07890 1332 aaPredicted RBP28.91■■■□□ 2.22
TRAPPC3-204ENST00000373166 ROBO2Q9HCK4 1378 aa28.89■■■□□ 2.22
TRAPPC3-204ENST00000373166 USP21Q9UK80 565 aa28.88■■■□□ 2.21
TRAPPC3-204ENST00000373166 RPGRIP1LQ68CZ1 1315 aa28.87■■■□□ 2.21
TRAPPC3-204ENST00000373166 TRPC5Q9UL62 973 aaPredicted RBP28.85■■■□□ 2.21
TRAPPC3-204ENST00000373166 NAIPQ13075 1403 aa28.85■■■□□ 2.21
TRAPPC3-204ENST00000373166 FNBP4Q8N3X1 1017 aaPredicted RBP28.83■■■□□ 2.21
TRAPPC3-204ENST00000373166 ATAD2Q6PL18 1390 aa28.83■■■□□ 2.21
TRAPPC3-204ENST00000373166 LAMC1P11047 1609 aa28.83■■■□□ 2.21
TRAPPC3-204ENST00000373166 KIF1BO60333 1816 aa28.83■■■□□ 2.21
TRAPPC3-204ENST00000373166 HFM1A2PYH4 1435 aa28.82■■■□□ 2.2
TRAPPC3-204ENST00000373166 PRAG1Q86YV5 1406 aa28.82■■■□□ 2.2
TRAPPC3-204ENST00000373166 SLC4A1APQ9BWU0 796 aaKnown RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms