RNA–Protein interactions for RNA: ENST00000372273.7

TMEM254-201, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-201ENST00000372273 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
TMEM254-201ENST00000372273 NEURL4Q96JN8 1562 aa13.94□□□□□ -0.18
TMEM254-201ENST00000372273 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
TMEM254-201ENST00000372273 ARHGAP23Q9P227 1491 aa13.94□□□□□ -0.18
TMEM254-201ENST00000372273 MYO5BQ9ULV0 1848 aa13.93□□□□□ -0.18
TMEM254-201ENST00000372273 SLIT1O75093 1534 aa13.93□□□□□ -0.18
TMEM254-201ENST00000372273 NPHP4O75161 1426 aaPredicted RBP13.93□□□□□ -0.18
TMEM254-201ENST00000372273 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
TMEM254-201ENST00000372273 DHX57Q6P158 1386 aaKnown RBP13.93□□□□□ -0.18
TMEM254-201ENST00000372273 NEUROD1Q13562 356 aa13.92□□□□□ -0.18
TMEM254-201ENST00000372273 ACIN1Q9UKV3 1341 aaKnown RBP13.92□□□□□ -0.18
TMEM254-201ENST00000372273 RBM33Q96EV2 1170 aaKnown RBP13.92□□□□□ -0.18
TMEM254-201ENST00000372273 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
TMEM254-201ENST00000372273 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
TMEM254-201ENST00000372273 SPATA31E1Q6ZUB1 1445 aa13.89□□□□□ -0.19
TMEM254-201ENST00000372273 MED14O60244 1454 aa13.88□□□□□ -0.19
TMEM254-201ENST00000372273 HDGFP51858 240 aaKnown RBP13.87□□□□□ -0.19
TMEM254-201ENST00000372273 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
TMEM254-201ENST00000372273 DCAF11Q8TEB1 546 aa13.87□□□□□ -0.19
TMEM254-201ENST00000372273 PLEKHG1Q9ULL1 1385 aa13.86□□□□□ -0.19
TMEM254-201ENST00000372273 POLR1AO95602 1720 aaPredicted RBP13.85□□□□□ -0.19
TMEM254-201ENST00000372273 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
TMEM254-201ENST00000372273 VGFO15240 615 aaPredicted RBP13.85□□□□□ -0.19
TMEM254-201ENST00000372273 KDM5AP29375 1690 aaKnown RBP13.85□□□□□ -0.19
TMEM254-201ENST00000372273 IQGAP1P46940 1657 aa13.84□□□□□ -0.19
TMEM254-201ENST00000372273 ADAMTS13Q76LX8 1427 aa13.84□□□□□ -0.19
TMEM254-201ENST00000372273 METP08581 1390 aa13.83□□□□□ -0.19
TMEM254-201ENST00000372273 KIF1BO60333 1816 aa13.83□□□□□ -0.2
TMEM254-201ENST00000372273 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
TMEM254-201ENST00000372273 KCNA6P17658 529 aa13.82□□□□□ -0.2
TMEM254-201ENST00000372273 CERKQ8TCT0 537 aa13.82□□□□□ -0.2
TMEM254-201ENST00000372273 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
TMEM254-201ENST00000372273 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
TMEM254-201ENST00000372273 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
TMEM254-201ENST00000372273 TBX22Q9Y458 520 aa13.81□□□□□ -0.2
TMEM254-201ENST00000372273 LTBP4Q8N2S1 1624 aa13.8□□□□□ -0.2
TMEM254-201ENST00000372273 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
TMEM254-201ENST00000372273 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
TMEM254-201ENST00000372273 STK26Q9P289 416 aa13.79□□□□□ -0.2
TMEM254-201ENST00000372273 NRXN3Q9Y4C0 1643 aa13.77□□□□□ -0.2
TMEM254-201ENST00000372273 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.2
TMEM254-201ENST00000372273 PROSER2Q86WR7 435 aaPredicted RBP13.76□□□□□ -0.21
TMEM254-201ENST00000372273 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
TMEM254-201ENST00000372273 PPLO60437 1756 aa13.75□□□□□ -0.21
TMEM254-201ENST00000372273 TMEM94Q12767 1356 aa13.74□□□□□ -0.21
TMEM254-201ENST00000372273 SETBP1Q9Y6X0 1596 aa13.74□□□□□ -0.21
TMEM254-201ENST00000372273 LRRC7Q96NW7 1537 aa13.74□□□□□ -0.21
TMEM254-201ENST00000372273 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
TMEM254-201ENST00000372273 NBPF1Q3BBV0 1214 aa13.73□□□□□ -0.21
TMEM254-201ENST00000372273 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
TMEM254-201ENST00000372273 WAPLQ7Z5K2 1190 aa13.72□□□□□ -0.21
TMEM254-201ENST00000372273 PIP4K2BP78356 416 aa13.71□□□□□ -0.21
TMEM254-201ENST00000372273 SAFB2Q14151 953 aaKnown RBP eCLIP13.71□□□□□ -0.21
TMEM254-201ENST00000372273 C14orf37Q86TY3 774 aa13.71□□□□□ -0.21
TMEM254-201ENST00000372273 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
TMEM254-201ENST00000372273 UBAP1LF5GYI3 381 aa13.71□□□□□ -0.21
TMEM254-201ENST00000372273 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
TMEM254-201ENST00000372273 NRXN1Q9ULB1 1477 aa13.7□□□□□ -0.22
TMEM254-201ENST00000372273 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
TMEM254-201ENST00000372273 SCAF1Q9H7N4 1312 aaKnown RBP13.7□□□□□ -0.22
TMEM254-201ENST00000372273 IFT172Q9UG01 1749 aa13.7□□□□□ -0.22
TMEM254-201ENST00000372273 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
TMEM254-201ENST00000372273 MYOM2P54296 1465 aa13.69□□□□□ -0.22
TMEM254-201ENST00000372273 TONSLQ96HA7 1378 aa13.69□□□□□ -0.22
TMEM254-201ENST00000372273 CPS1P31327 1500 aa13.68□□□□□ -0.22
TMEM254-201ENST00000372273 ASXL1Q8IXJ9 1541 aa13.68□□□□□ -0.22
TMEM254-201ENST00000372273 PLEKHH1Q9ULM0 1364 aa13.68□□□□□ -0.22
TMEM254-201ENST00000372273 PIK3R4Q99570 1358 aa13.67□□□□□ -0.22
TMEM254-201ENST00000372273 PRAG1Q86YV5 1406 aa13.67□□□□□ -0.22
TMEM254-201ENST00000372273 DIP2AQ14689 1571 aa13.66□□□□□ -0.22
TMEM254-201ENST00000372273 CHD2O14647 1828 aaKnown RBP13.66□□□□□ -0.22
TMEM254-201ENST00000372273 SETD1AO15047 1707 aaKnown RBP13.66□□□□□ -0.22
TMEM254-201ENST00000372273 YTHDC2Q9H6S0 1430 aaKnown RBP13.66□□□□□ -0.22
TMEM254-201ENST00000372273 NUTM2FA1L443 756 aa13.65□□□□□ -0.22
TMEM254-201ENST00000372273 FBXO41Q8TF61 875 aa13.65□□□□□ -0.22
TMEM254-201ENST00000372273 PRAM1Q96QH2 718 aa13.65□□□□□ -0.22
TMEM254-201ENST00000372273 HIRIP3Q9BW71 556 aaPredicted RBP13.65□□□□□ -0.22
TMEM254-201ENST00000372273 CLSPNQ9HAW4 1339 aa13.65□□□□□ -0.22
TMEM254-201ENST00000372273 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
TMEM254-201ENST00000372273 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
TMEM254-201ENST00000372273 NKTRP30414 1462 aaKnown RBP13.63□□□□□ -0.23
TMEM254-201ENST00000372273 TOM1O60784 492 aa13.63□□□□□ -0.23
TMEM254-201ENST00000372273 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
TMEM254-201ENST00000372273 C19orf44Q9H6X5 657 aa13.63□□□□□ -0.23
TMEM254-201ENST00000372273 ADGRB1O14514 1584 aa13.62□□□□□ -0.23
TMEM254-201ENST00000372273 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
TMEM254-201ENST00000372273 XRN1Q8IZH2 1706 aaKnown RBP13.62□□□□□ -0.23
TMEM254-201ENST00000372273 XIRP1Q702N8 1843 aaKnown RBP13.61□□□□□ -0.23
TMEM254-201ENST00000372273 MSH6P52701 1360 aa13.61□□□□□ -0.23
TMEM254-201ENST00000372273 DIEXFQ68CQ4 756 aaKnown RBP13.61□□□□□ -0.23
TMEM254-201ENST00000372273 POGKQ9P215 609 aa13.61□□□□□ -0.23
TMEM254-201ENST00000372273 SLAIN2Q9P270 581 aa13.61□□□□□ -0.23
TMEM254-201ENST00000372273 ZNF316A6NFI3 1004 aaPredicted RBP13.6□□□□□ -0.23
TMEM254-201ENST00000372273 ATF3P18847 181 aa13.6□□□□□ -0.23
TMEM254-201ENST00000372273 ROCK2O75116 1388 aaKnown RBP13.59□□□□□ -0.23
TMEM254-201ENST00000372273 MINK1Q8N4C8 1332 aaPredicted RBP13.59□□□□□ -0.23
TMEM254-201ENST00000372273 PTCH1Q13635 1447 aa13.59□□□□□ -0.23
TMEM254-201ENST00000372273 DDX17Q92841 729 aaKnown RBP13.59□□□□□ -0.23
TMEM254-201ENST00000372273 TECPR2O15040 1411 aa13.57□□□□□ -0.24
TMEM254-201ENST00000372273 CADPS2Q86UW7 1296 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms