RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 PLEKHG1Q9ULL1 1385 aa28.51■■■□□ 2.16
TMEM53-201ENST00000372235 ZFYVE9O95405 1425 aa28.51■■■□□ 2.15
TMEM53-201ENST00000372235 RIMS2Q9UQ26 1411 aa28.51■■■□□ 2.15
TMEM53-201ENST00000372235 DISP3Q9P2K9 1392 aa28.49■■■□□ 2.15
TMEM53-201ENST00000372235 SLC26A8Q96RN1 970 aa28.48■■■□□ 2.15
TMEM53-201ENST00000372235 NAIPQ13075 1403 aa28.48■■■□□ 2.15
TMEM53-201ENST00000372235 HFM1A2PYH4 1435 aa28.45■■■□□ 2.15
TMEM53-201ENST00000372235 NKTRP30414 1462 aaKnown RBP28.43■■■□□ 2.14
TMEM53-201ENST00000372235 TBX22Q9Y458 520 aa28.43■■■□□ 2.14
TMEM53-201ENST00000372235 MYO5BQ9ULV0 1848 aa28.41■■■□□ 2.14
TMEM53-201ENST00000372235 HSPA1LP34931 641 aa28.41■■■□□ 2.14
TMEM53-201ENST00000372235 PROSER2Q86WR7 435 aaPredicted RBP28.41■■■□□ 2.14
TMEM53-201ENST00000372235 SPHKAPQ2M3C7 1700 aa28.39■■■□□ 2.14
TMEM53-201ENST00000372235 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
TMEM53-201ENST00000372235 NWD1Q149M9 1564 aa28.38■■■□□ 2.13
TMEM53-201ENST00000372235 DIP2AQ14689 1571 aa28.37■■■□□ 2.13
TMEM53-201ENST00000372235 TRIM52Q96A61 297 aa28.37■■■□□ 2.13
TMEM53-201ENST00000372235 ACIN1Q9UKV3 1341 aaKnown RBP28.37■■■□□ 2.13
TMEM53-201ENST00000372235 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
TMEM53-201ENST00000372235 ALKQ9UM73 1620 aa28.36■■■□□ 2.13
TMEM53-201ENST00000372235 NCOA3Q9Y6Q9 1424 aa28.33■■■□□ 2.13
TMEM53-201ENST00000372235 ZNF326Q5BKZ1 582 aaKnown RBP28.32■■■□□ 2.12
TMEM53-201ENST00000372235 MSH6P52701 1360 aa28.31■■■□□ 2.12
TMEM53-201ENST00000372235 TRPM2O94759 1503 aa28.31■■■□□ 2.12
TMEM53-201ENST00000372235 XIRP1Q702N8 1843 aaKnown RBP28.31■■■□□ 2.12
TMEM53-201ENST00000372235 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
TMEM53-201ENST00000372235 FAM135BQ49AJ0 1406 aa28.29■■■□□ 2.12
TMEM53-201ENST00000372235 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
TMEM53-201ENST00000372235 ADAMTS13Q76LX8 1427 aa28.27■■■□□ 2.12
TMEM53-201ENST00000372235 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
TMEM53-201ENST00000372235 SENP3Q9H4L4 574 aaPredicted RBP28.24■■■□□ 2.11
TMEM53-201ENST00000372235 KIF1BO60333 1816 aa28.21■■■□□ 2.11
TMEM53-201ENST00000372235 CLTCL1P53675 1640 aa28.21■■■□□ 2.11
TMEM53-201ENST00000372235 SETBP1Q9Y6X0 1596 aa28.2■■■□□ 2.11
TMEM53-201ENST00000372235 RPGRIP1LQ68CZ1 1315 aa28.19■■■□□ 2.1
TMEM53-201ENST00000372235 VGFO15240 615 aaPredicted RBP28.19■■■□□ 2.1
TMEM53-201ENST00000372235 C14orf37Q86TY3 774 aa28.19■■■□□ 2.1
TMEM53-201ENST00000372235 RBM33Q96EV2 1170 aaKnown RBP28.18■■■□□ 2.1
TMEM53-201ENST00000372235 AMOTL2Q9Y2J4 779 aa28.18■■■□□ 2.1
TMEM53-201ENST00000372235 SLAIN2Q9P270 581 aa28.17■■■□□ 2.1
TMEM53-201ENST00000372235 CADPS2Q86UW7 1296 aa28.16■■■□□ 2.1
TMEM53-201ENST00000372235 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
TMEM53-201ENST00000372235 MED1Q15648 1581 aaPredicted RBP28.16■■■□□ 2.1
TMEM53-201ENST00000372235 NEXMIFQ5QGS0 1516 aa28.14■■■□□ 2.1
TMEM53-201ENST00000372235 ATF3P18847 181 aa28.13■■■□□ 2.09
TMEM53-201ENST00000372235 ILDR2Q71H61 639 aa28.13■■■□□ 2.09
TMEM53-201ENST00000372235 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
TMEM53-201ENST00000372235 ROBO1Q9Y6N7 1651 aa28.1■■■□□ 2.09
TMEM53-201ENST00000372235 NRXN3Q9Y4C0 1643 aa28.1■■■□□ 2.09
TMEM53-201ENST00000372235 SOCS7O14512 581 aa28.09■■■□□ 2.09
TMEM53-201ENST00000372235 MPHOSPH9Q99550 1183 aa28.09■■■□□ 2.09
TMEM53-201ENST00000372235 CCDC144AA2RUR9 1427 aa28.09■■■□□ 2.09
TMEM53-201ENST00000372235 PTPRUQ92729 1446 aa28.07■■■□□ 2.08
TMEM53-201ENST00000372235 DCCP43146 1447 aa28.06■■■□□ 2.08
TMEM53-201ENST00000372235 SETD5Q9C0A6 1442 aa28.06■■■□□ 2.08
TMEM53-201ENST00000372235 METP08581 1390 aa28.04■■■□□ 2.08
TMEM53-201ENST00000372235 XRN1Q8IZH2 1706 aaKnown RBP28.04■■■□□ 2.08
TMEM53-201ENST00000372235 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.01■■■□□ 2.07
TMEM53-201ENST00000372235 FOXD1Q16676 465 aa27.99■■■□□ 2.07
TMEM53-201ENST00000372235 ANKRD30BQ9BXX2 1392 aa27.98■■■□□ 2.07
TMEM53-201ENST00000372235 JCADQ9P266 1359 aa27.96■■■□□ 2.07
TMEM53-201ENST00000372235 PPLO60437 1756 aa27.96■■■□□ 2.07
TMEM53-201ENST00000372235 PHLPP1O60346 1717 aa27.95■■■□□ 2.07
TMEM53-201ENST00000372235 PTCH1Q13635 1447 aa27.94■■■□□ 2.06
TMEM53-201ENST00000372235 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
TMEM53-201ENST00000372235 ADGRL3Q9HAR2 1447 aa27.92■■■□□ 2.06
TMEM53-201ENST00000372235 SPATA31E1Q6ZUB1 1445 aa27.92■■■□□ 2.06
TMEM53-201ENST00000372235 RGL3Q3MIN7 710 aa27.9■■■□□ 2.06
TMEM53-201ENST00000372235 RAB3GAP2Q9H2M9 1393 aa27.89■■■□□ 2.06
TMEM53-201ENST00000372235 HRCP23327 699 aa27.89■■■□□ 2.06
TMEM53-201ENST00000372235 AHDC1Q5TGY3 1603 aaPredicted RBP27.89■■■□□ 2.05
TMEM53-201ENST00000372235 BRINP3Q76B58 766 aa27.87■■■□□ 2.05
TMEM53-201ENST00000372235 SPATA31A6Q5VVP1 1343 aa27.87■■■□□ 2.05
TMEM53-201ENST00000372235 SETD1AO15047 1707 aaKnown RBP27.87■■■□□ 2.05
TMEM53-201ENST00000372235 MST1RQ04912 1400 aa27.85■■■□□ 2.05
TMEM53-201ENST00000372235 COL16A1Q07092 1604 aaPredicted RBP27.85■■■□□ 2.05
TMEM53-201ENST00000372235 ADGRF5Q8IZF2 1346 aa27.83■■■□□ 2.05
TMEM53-201ENST00000372235 ROBO2Q9HCK4 1378 aa27.82■■■□□ 2.04
TMEM53-201ENST00000372235 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
TMEM53-201ENST00000372235 IFT172Q9UG01 1749 aa27.79■■■□□ 2.04
TMEM53-201ENST00000372235 NALCNQ8IZF0 1738 aa27.78■■■□□ 2.04
TMEM53-201ENST00000372235 PIK3C2GO75747 1445 aa27.78■■■□□ 2.04
TMEM53-201ENST00000372235 LRRC59Q96AG4 307 aaKnown RBP27.77■■■□□ 2.04
TMEM53-201ENST00000372235 TECPR2O15040 1411 aa27.75■■■□□ 2.03
TMEM53-201ENST00000372235 LRPPRCP42704 1394 aaKnown RBP27.75■■■□□ 2.03
TMEM53-201ENST00000372235 ABCC11Q96J66 1382 aa27.74■■■□□ 2.03
TMEM53-201ENST00000372235 STAC3Q96MF2 364 aa27.74■■■□□ 2.03
TMEM53-201ENST00000372235 RGS17Q9UGC6 210 aaPredicted RBP27.74■■■□□ 2.03
TMEM53-201ENST00000372235 C1orf167Q5SNV9 1468 aa27.74■■■□□ 2.03
TMEM53-201ENST00000372235 SHPRHQ149N8 1683 aa27.74■■■□□ 2.03
TMEM53-201ENST00000372235 MYOM2P54296 1465 aa27.73■■■□□ 2.03
TMEM53-201ENST00000372235 MEX3CQ5U5Q3 659 aaKnown RBP27.73■■■□□ 2.03
TMEM53-201ENST00000372235 NHSL1Q5SYE7 1610 aa27.71■■■□□ 2.03
TMEM53-201ENST00000372235 SIRT1Q96EB6 747 aa27.71■■■□□ 2.03
TMEM53-201ENST00000372235 C14orf93Q9H972 538 aaKnown RBP27.7■■■□□ 2.02
TMEM53-201ENST00000372235 STK26Q9P289 416 aa27.69■■■□□ 2.02
TMEM53-201ENST00000372235 LAMC1P11047 1609 aa27.69■■■□□ 2.02
TMEM53-201ENST00000372235 NRXN1Q9ULB1 1477 aa27.69■■■□□ 2.02
TMEM53-201ENST00000372235 DHX57Q6P158 1386 aaKnown RBP27.68■■■□□ 2.02
TMEM53-201ENST00000372235 ZNF772Q68DY9 489 aaPredicted RBP27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms