RNA–Protein interactions for RNA: ENST00000371368.5

LRRC42-202, Transcript of leucine rich repeat containing 42, humanhuman

TSL 3

Gene LRRC42, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-202ENST00000371368 RIMS2Q9UQ26 1411 aa25.89■■□□□ 1.74
LRRC42-202ENST00000371368 DISP3Q9P2K9 1392 aa25.88■■□□□ 1.73
LRRC42-202ENST00000371368 KCNA6P17658 529 aa25.88■■□□□ 1.73
LRRC42-202ENST00000371368 NAIPQ13075 1403 aa25.88■■□□□ 1.73
LRRC42-202ENST00000371368 PPP1R15AO75807 674 aaPredicted RBP25.87■■□□□ 1.73
LRRC42-202ENST00000371368 HSPA1LP34931 641 aa25.87■■□□□ 1.73
LRRC42-202ENST00000371368 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
LRRC42-202ENST00000371368 ALKQ9UM73 1620 aa25.87■■□□□ 1.73
LRRC42-202ENST00000371368 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
LRRC42-202ENST00000371368 PLEKHG1Q9ULL1 1385 aa25.84■■□□□ 1.73
LRRC42-202ENST00000371368 PROSER2Q86WR7 435 aaPredicted RBP25.81■■□□□ 1.72
LRRC42-202ENST00000371368 XIRP1Q702N8 1843 aaKnown RBP25.81■■□□□ 1.72
LRRC42-202ENST00000371368 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
LRRC42-202ENST00000371368 TBX22Q9Y458 520 aa25.79■■□□□ 1.72
LRRC42-202ENST00000371368 TMEM94Q12767 1356 aa25.79■■□□□ 1.72
LRRC42-202ENST00000371368 TRIM52Q96A61 297 aa25.78■■□□□ 1.72
LRRC42-202ENST00000371368 HFM1A2PYH4 1435 aa25.78■■□□□ 1.72
LRRC42-202ENST00000371368 SPHKAPQ2M3C7 1700 aa25.77■■□□□ 1.72
LRRC42-202ENST00000371368 RBM33Q96EV2 1170 aaKnown RBP25.75■■□□□ 1.71
LRRC42-202ENST00000371368 NWD1Q149M9 1564 aa25.74■■□□□ 1.71
LRRC42-202ENST00000371368 NKTRP30414 1462 aaKnown RBP25.73■■□□□ 1.71
LRRC42-202ENST00000371368 ZNF326Q5BKZ1 582 aaKnown RBP25.71■■□□□ 1.71
LRRC42-202ENST00000371368 ILDR2Q71H61 639 aa25.71■■□□□ 1.71
LRRC42-202ENST00000371368 CHD2O14647 1828 aaKnown RBP25.71■■□□□ 1.71
LRRC42-202ENST00000371368 ADAMTS13Q76LX8 1427 aa25.71■■□□□ 1.71
LRRC42-202ENST00000371368 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
LRRC42-202ENST00000371368 TRPM2O94759 1503 aa25.67■■□□□ 1.7
LRRC42-202ENST00000371368 CLTCL1P53675 1640 aa25.66■■□□□ 1.7
LRRC42-202ENST00000371368 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
LRRC42-202ENST00000371368 PIK3R4Q99570 1358 aa25.65■■□□□ 1.7
LRRC42-202ENST00000371368 FAM135BQ49AJ0 1406 aa25.64■■□□□ 1.7
LRRC42-202ENST00000371368 MSH6P52701 1360 aa25.63■■□□□ 1.69
LRRC42-202ENST00000371368 AMOTL2Q9Y2J4 779 aa25.6■■□□□ 1.69
LRRC42-202ENST00000371368 KIF1BO60333 1816 aa25.59■■□□□ 1.69
LRRC42-202ENST00000371368 NCOA3Q9Y6Q9 1424 aa25.59■■□□□ 1.69
LRRC42-202ENST00000371368 MED1Q15648 1581 aaPredicted RBP25.58■■□□□ 1.69
LRRC42-202ENST00000371368 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
LRRC42-202ENST00000371368 PTPRUQ92729 1446 aa25.57■■□□□ 1.68
LRRC42-202ENST00000371368 NRXN3Q9Y4C0 1643 aa25.57■■□□□ 1.68
LRRC42-202ENST00000371368 C14orf37Q86TY3 774 aa25.57■■□□□ 1.68
LRRC42-202ENST00000371368 NEXMIFQ5QGS0 1516 aa25.57■■□□□ 1.68
LRRC42-202ENST00000371368 SETBP1Q9Y6X0 1596 aa25.56■■□□□ 1.68
LRRC42-202ENST00000371368 FOXD1Q16676 465 aa25.55■■□□□ 1.68
LRRC42-202ENST00000371368 ROBO1Q9Y6N7 1651 aa25.54■■□□□ 1.68
LRRC42-202ENST00000371368 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
LRRC42-202ENST00000371368 C19orf44Q9H6X5 657 aa25.53■■□□□ 1.68
LRRC42-202ENST00000371368 VGFO15240 615 aaPredicted RBP25.51■■□□□ 1.67
LRRC42-202ENST00000371368 METP08581 1390 aa25.51■■□□□ 1.67
LRRC42-202ENST00000371368 SOCS7O14512 581 aa25.5■■□□□ 1.67
LRRC42-202ENST00000371368 RPGRIP1LQ68CZ1 1315 aa25.5■■□□□ 1.67
LRRC42-202ENST00000371368 ATF3P18847 181 aa25.48■■□□□ 1.67
LRRC42-202ENST00000371368 CADPS2Q86UW7 1296 aa25.48■■□□□ 1.67
LRRC42-202ENST00000371368 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
LRRC42-202ENST00000371368 SETD5Q9C0A6 1442 aa25.46■■□□□ 1.67
LRRC42-202ENST00000371368 XRN1Q8IZH2 1706 aaKnown RBP25.46■■□□□ 1.67
LRRC42-202ENST00000371368 ACIN1Q9UKV3 1341 aaKnown RBP25.46■■□□□ 1.67
LRRC42-202ENST00000371368 PHF23Q9BUL5 403 aaPredicted RBP25.46■■□□□ 1.67
LRRC42-202ENST00000371368 CCDC144AA2RUR9 1427 aa25.43■■□□□ 1.66
LRRC42-202ENST00000371368 RGL3Q3MIN7 710 aa25.39■■□□□ 1.66
LRRC42-202ENST00000371368 PPLO60437 1756 aa25.39■■□□□ 1.65
LRRC42-202ENST00000371368 PHLPP1O60346 1717 aa25.38■■□□□ 1.65
LRRC42-202ENST00000371368 DCCP43146 1447 aa25.37■■□□□ 1.65
LRRC42-202ENST00000371368 SPATA31E1Q6ZUB1 1445 aa25.36■■□□□ 1.65
LRRC42-202ENST00000371368 SETD1AO15047 1707 aaKnown RBP25.35■■□□□ 1.65
LRRC42-202ENST00000371368 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
LRRC42-202ENST00000371368 ADGRF5Q8IZF2 1346 aa25.34■■□□□ 1.65
LRRC42-202ENST00000371368 BRINP3Q76B58 766 aa25.33■■□□□ 1.65
LRRC42-202ENST00000371368 ADGRL3Q9HAR2 1447 aa25.33■■□□□ 1.65
LRRC42-202ENST00000371368 JCADQ9P266 1359 aa25.32■■□□□ 1.64
LRRC42-202ENST00000371368 RGS17Q9UGC6 210 aaPredicted RBP25.31■■□□□ 1.64
LRRC42-202ENST00000371368 ANKRD30BQ9BXX2 1392 aa25.31■■□□□ 1.64
LRRC42-202ENST00000371368 ROBO2Q9HCK4 1378 aa25.31■■□□□ 1.64
LRRC42-202ENST00000371368 COL16A1Q07092 1604 aaPredicted RBP25.3■■□□□ 1.64
LRRC42-202ENST00000371368 MST1RQ04912 1400 aa25.3■■□□□ 1.64
LRRC42-202ENST00000371368 PTCH1Q13635 1447 aa25.29■■□□□ 1.64
LRRC42-202ENST00000371368 AHDC1Q5TGY3 1603 aaPredicted RBP25.29■■□□□ 1.64
LRRC42-202ENST00000371368 NALCNQ8IZF0 1738 aa25.27■■□□□ 1.64
LRRC42-202ENST00000371368 PRAG1Q86YV5 1406 aa25.27■■□□□ 1.64
LRRC42-202ENST00000371368 IFT172Q9UG01 1749 aa25.26■■□□□ 1.63
LRRC42-202ENST00000371368 ASXL1Q8IXJ9 1541 aa25.23■■□□□ 1.63
LRRC42-202ENST00000371368 HRCP23327 699 aa25.22■■□□□ 1.63
LRRC42-202ENST00000371368 SPATA31A6Q5VVP1 1343 aa25.21■■□□□ 1.63
LRRC42-202ENST00000371368 STK26Q9P289 416 aa25.21■■□□□ 1.63
LRRC42-202ENST00000371368 TMEM132EQ6IEE7 984 aa25.2■■□□□ 1.62
LRRC42-202ENST00000371368 C1orf167Q5SNV9 1468 aa25.19■■□□□ 1.62
LRRC42-202ENST00000371368 PIK3C2GO75747 1445 aa25.19■■□□□ 1.62
LRRC42-202ENST00000371368 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
LRRC42-202ENST00000371368 POTEAQ6S8J7 498 aa25.18■■□□□ 1.62
LRRC42-202ENST00000371368 DDX17Q92841 729 aaKnown RBP25.17■■□□□ 1.62
LRRC42-202ENST00000371368 SHPRHQ149N8 1683 aa25.17■■□□□ 1.62
LRRC42-202ENST00000371368 NHSL1Q5SYE7 1610 aa25.16■■□□□ 1.62
LRRC42-202ENST00000371368 WAPLQ7Z5K2 1190 aa25.16■■□□□ 1.62
LRRC42-202ENST00000371368 LRRC59Q96AG4 307 aaKnown RBP25.16■■□□□ 1.62
LRRC42-202ENST00000371368 C14orf93Q9H972 538 aaKnown RBP25.16■■□□□ 1.62
LRRC42-202ENST00000371368 ABCC11Q96J66 1382 aa25.16■■□□□ 1.62
LRRC42-202ENST00000371368 ORAI2Q96SN7 254 aa25.15■■□□□ 1.62
LRRC42-202ENST00000371368 TECPR2O15040 1411 aa25.14■■□□□ 1.62
LRRC42-202ENST00000371368 LRP6O75581 1613 aa25.14■■□□□ 1.61
LRRC42-202ENST00000371368 MEX3CQ5U5Q3 659 aaKnown RBP25.13■■□□□ 1.61
LRRC42-202ENST00000371368 NRXN1Q9ULB1 1477 aa25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms