RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 ITGAEP38570 1179 aa23.17■■□□□ 1.3
SS18L1-202ENST00000370848 SCAF1Q9H7N4 1312 aaKnown RBP23.16■■□□□ 1.3
SS18L1-202ENST00000370848 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
SS18L1-202ENST00000370848 STAG3Q9UJ98 1225 aa23.15■■□□□ 1.3
SS18L1-202ENST00000370848 KCNA6P17658 529 aa23.14■■□□□ 1.29
SS18L1-202ENST00000370848 PLEKHG1Q9ULL1 1385 aa23.14■■□□□ 1.29
SS18L1-202ENST00000370848 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
SS18L1-202ENST00000370848 CHD2O14647 1828 aaKnown RBP23.11■■□□□ 1.29
SS18L1-202ENST00000370848 TMEM94Q12767 1356 aa23.11■■□□□ 1.29
SS18L1-202ENST00000370848 RIMS2Q9UQ26 1411 aa23.08■■□□□ 1.29
SS18L1-202ENST00000370848 DIP2AQ14689 1571 aa23.08■■□□□ 1.29
SS18L1-202ENST00000370848 SLC26A8Q96RN1 970 aa23.05■■□□□ 1.28
SS18L1-202ENST00000370848 NCOA3Q9Y6Q9 1424 aa23.04■■□□□ 1.28
SS18L1-202ENST00000370848 ROBO1Q9Y6N7 1651 aa23.03■■□□□ 1.28
SS18L1-202ENST00000370848 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
SS18L1-202ENST00000370848 HDGFP51858 240 aaKnown RBP23.02■■□□□ 1.28
SS18L1-202ENST00000370848 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
SS18L1-202ENST00000370848 TBX22Q9Y458 520 aa23.01■■□□□ 1.27
SS18L1-202ENST00000370848 ABCF1Q8NE71 845 aaKnown RBP eCLIP23■■□□□ 1.27
SS18L1-202ENST00000370848 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
SS18L1-202ENST00000370848 NUP155O75694 1391 aa22.99■■□□□ 1.27
SS18L1-202ENST00000370848 PROSER2Q86WR7 435 aaPredicted RBP22.97■■□□□ 1.27
SS18L1-202ENST00000370848 MSH6P52701 1360 aa22.95■■□□□ 1.26
SS18L1-202ENST00000370848 NRXN3Q9Y4C0 1643 aa22.95■■□□□ 1.26
SS18L1-202ENST00000370848 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
SS18L1-202ENST00000370848 TRPM2O94759 1503 aa22.93■■□□□ 1.26
SS18L1-202ENST00000370848 XRN1Q8IZH2 1706 aaKnown RBP22.91■■□□□ 1.26
SS18L1-202ENST00000370848 PPP1R15AO75807 674 aaPredicted RBP22.91■■□□□ 1.26
SS18L1-202ENST00000370848 NAIPQ13075 1403 aa22.9■■□□□ 1.26
SS18L1-202ENST00000370848 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
SS18L1-202ENST00000370848 COL16A1Q07092 1604 aaPredicted RBP22.88■■□□□ 1.25
SS18L1-202ENST00000370848 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.88■■□□□ 1.25
SS18L1-202ENST00000370848 RBM33Q96EV2 1170 aaKnown RBP22.87■■□□□ 1.25
SS18L1-202ENST00000370848 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
SS18L1-202ENST00000370848 PHLPP1O60346 1717 aa22.86■■□□□ 1.25
SS18L1-202ENST00000370848 PTPRUQ92729 1446 aa22.86■■□□□ 1.25
SS18L1-202ENST00000370848 BCANQ96GW7 911 aa22.86■■□□□ 1.25
SS18L1-202ENST00000370848 SLAIN2Q9P270 581 aa22.86■■□□□ 1.25
SS18L1-202ENST00000370848 RGS17Q9UGC6 210 aaPredicted RBP22.86■■□□□ 1.25
SS18L1-202ENST00000370848 DCCP43146 1447 aa22.85■■□□□ 1.25
SS18L1-202ENST00000370848 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
SS18L1-202ENST00000370848 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
SS18L1-202ENST00000370848 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
SS18L1-202ENST00000370848 CHGAP10645 457 aaKnown RBP22.83■■□□□ 1.25
SS18L1-202ENST00000370848 SENP3Q9H4L4 574 aaPredicted RBP22.8■■□□□ 1.24
SS18L1-202ENST00000370848 C19orf44Q9H6X5 657 aa22.8■■□□□ 1.24
SS18L1-202ENST00000370848 JCADQ9P266 1359 aa22.79■■□□□ 1.24
SS18L1-202ENST00000370848 KIF1BO60333 1816 aa22.78■■□□□ 1.24
SS18L1-202ENST00000370848 CADPS2Q86UW7 1296 aa22.78■■□□□ 1.24
SS18L1-202ENST00000370848 PRAG1Q86YV5 1406 aa22.78■■□□□ 1.24
SS18L1-202ENST00000370848 SHPRHQ149N8 1683 aa22.77■■□□□ 1.24
SS18L1-202ENST00000370848 NUTM2DQ5VT03 806 aaPredicted RBP22.77■■□□□ 1.24
SS18L1-202ENST00000370848 SETD1AO15047 1707 aaKnown RBP22.77■■□□□ 1.23
SS18L1-202ENST00000370848 AMOTL2Q9Y2J4 779 aa22.76■■□□□ 1.23
SS18L1-202ENST00000370848 METP08581 1390 aa22.74■■□□□ 1.23
SS18L1-202ENST00000370848 NHSL1Q5SYE7 1610 aa22.71■■□□□ 1.23
SS18L1-202ENST00000370848 MST1RQ04912 1400 aa22.71■■□□□ 1.23
SS18L1-202ENST00000370848 TRIM52Q96A61 297 aa22.7■■□□□ 1.22
SS18L1-202ENST00000370848 SPATA31A6Q5VVP1 1343 aa22.7■■□□□ 1.22
SS18L1-202ENST00000370848 ADGRL3Q9HAR2 1447 aa22.7■■□□□ 1.22
SS18L1-202ENST00000370848 NALCNQ8IZF0 1738 aa22.7■■□□□ 1.22
SS18L1-202ENST00000370848 LRP6O75581 1613 aa22.69■■□□□ 1.22
SS18L1-202ENST00000370848 ASXL1Q8IXJ9 1541 aa22.69■■□□□ 1.22
SS18L1-202ENST00000370848 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
SS18L1-202ENST00000370848 ATF3P18847 181 aa22.69■■□□□ 1.22
SS18L1-202ENST00000370848 POTEAQ6S8J7 498 aa22.68■■□□□ 1.22
SS18L1-202ENST00000370848 LAMC1P11047 1609 aa22.68■■□□□ 1.22
SS18L1-202ENST00000370848 BRINP3Q76B58 766 aa22.67■■□□□ 1.22
SS18L1-202ENST00000370848 PPLO60437 1756 aa22.67■■□□□ 1.22
SS18L1-202ENST00000370848 ZNF326Q5BKZ1 582 aaKnown RBP22.66■■□□□ 1.22
SS18L1-202ENST00000370848 C14orf37Q86TY3 774 aa22.66■■□□□ 1.22
SS18L1-202ENST00000370848 SETD5Q9C0A6 1442 aa22.65■■□□□ 1.22
SS18L1-202ENST00000370848 RPGRIP1LQ68CZ1 1315 aa22.64■■□□□ 1.22
SS18L1-202ENST00000370848 VGFO15240 615 aaPredicted RBP22.6■■□□□ 1.21
SS18L1-202ENST00000370848 RAB3GAP2Q9H2M9 1393 aa22.6■■□□□ 1.21
SS18L1-202ENST00000370848 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
SS18L1-202ENST00000370848 IFT172Q9UG01 1749 aa22.59■■□□□ 1.21
SS18L1-202ENST00000370848 SPATA31E1Q6ZUB1 1445 aa22.57■■□□□ 1.2
SS18L1-202ENST00000370848 FOXD1Q16676 465 aa22.56■■□□□ 1.2
SS18L1-202ENST00000370848 ROBO2Q9HCK4 1378 aa22.55■■□□□ 1.2
SS18L1-202ENST00000370848 C1orf167Q5SNV9 1468 aa22.54■■□□□ 1.2
SS18L1-202ENST00000370848 TECPR2O15040 1411 aa22.53■■□□□ 1.2
SS18L1-202ENST00000370848 CDC42BPGQ6DT37 1551 aa22.53■■□□□ 1.2
SS18L1-202ENST00000370848 MPHOSPH9Q99550 1183 aa22.52■■□□□ 1.2
SS18L1-202ENST00000370848 ZNF772Q68DY9 489 aaPredicted RBP22.51■■□□□ 1.19
SS18L1-202ENST00000370848 CCDC144AA2RUR9 1427 aa22.5■■□□□ 1.19
SS18L1-202ENST00000370848 CDK12Q9NYV4 1490 aaPredicted RBP22.5■■□□□ 1.19
SS18L1-202ENST00000370848 KNDC1Q76NI1 1749 aa22.5■■□□□ 1.19
SS18L1-202ENST00000370848 ACIN1Q9UKV3 1341 aaKnown RBP22.5■■□□□ 1.19
SS18L1-202ENST00000370848 PNPLA6Q8IY17 1366 aa22.5■■□□□ 1.19
SS18L1-202ENST00000370848 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
SS18L1-202ENST00000370848 ANKRD30BQ9BXX2 1392 aa22.48■■□□□ 1.19
SS18L1-202ENST00000370848 SOS2Q07890 1332 aaPredicted RBP22.46■■□□□ 1.19
SS18L1-202ENST00000370848 PIK3C2GO75747 1445 aa22.46■■□□□ 1.19
SS18L1-202ENST00000370848 COL22A1Q8NFW1 1626 aaPredicted RBP22.46■■□□□ 1.19
SS18L1-202ENST00000370848 NRXN1Q9ULB1 1477 aa22.43■■□□□ 1.18
SS18L1-202ENST00000370848 MEX3CQ5U5Q3 659 aaKnown RBP22.43■■□□□ 1.18
SS18L1-202ENST00000370848 ADGRF5Q8IZF2 1346 aa22.42■■□□□ 1.18
SS18L1-202ENST00000370848 LRPPRCP42704 1394 aaKnown RBP22.41■■□□□ 1.18
SS18L1-202ENST00000370848 ABCC11Q96J66 1382 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms