RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PLEKHG1Q9ULL1 1385 aa24.58■■□□□ 1.53
VMA21-202ENST00000370361 NWD1Q149M9 1564 aa24.57■■□□□ 1.52
VMA21-202ENST00000370361 RIMS2Q9UQ26 1411 aa24.56■■□□□ 1.52
VMA21-202ENST00000370361 PPP1R15AO75807 674 aaPredicted RBP24.54■■□□□ 1.52
VMA21-202ENST00000370361 ITGAEP38570 1179 aa24.54■■□□□ 1.52
VMA21-202ENST00000370361 XIRP1Q702N8 1843 aaKnown RBP24.54■■□□□ 1.52
VMA21-202ENST00000370361 MYO5BQ9ULV0 1848 aa24.54■■□□□ 1.52
VMA21-202ENST00000370361 BCANQ96GW7 911 aa24.52■■□□□ 1.52
VMA21-202ENST00000370361 SLC26A8Q96RN1 970 aa24.52■■□□□ 1.52
VMA21-202ENST00000370361 DIP2AQ14689 1571 aa24.51■■□□□ 1.51
VMA21-202ENST00000370361 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
VMA21-202ENST00000370361 ILDR2Q71H61 639 aa24.49■■□□□ 1.51
VMA21-202ENST00000370361 MED1Q15648 1581 aaPredicted RBP24.48■■□□□ 1.51
VMA21-202ENST00000370361 PROSER2Q86WR7 435 aaPredicted RBP24.48■■□□□ 1.51
VMA21-202ENST00000370361 TBX22Q9Y458 520 aa24.48■■□□□ 1.51
VMA21-202ENST00000370361 FAM135BQ49AJ0 1406 aa24.47■■□□□ 1.51
VMA21-202ENST00000370361 PIK3R4Q99570 1358 aa24.47■■□□□ 1.51
VMA21-202ENST00000370361 SOCS7O14512 581 aa24.47■■□□□ 1.51
VMA21-202ENST00000370361 PPARGC1BQ86YN6 1023 aaKnown RBP24.47■■□□□ 1.51
VMA21-202ENST00000370361 SPHKAPQ2M3C7 1700 aa24.47■■□□□ 1.51
VMA21-202ENST00000370361 NCOA3Q9Y6Q9 1424 aa24.46■■□□□ 1.51
VMA21-202ENST00000370361 CHGAP10645 457 aaKnown RBP24.46■■□□□ 1.51
VMA21-202ENST00000370361 CHD2O14647 1828 aaKnown RBP24.46■■□□□ 1.51
VMA21-202ENST00000370361 MSH6P52701 1360 aa24.43■■□□□ 1.5
VMA21-202ENST00000370361 NAIPQ13075 1403 aa24.43■■□□□ 1.5
VMA21-202ENST00000370361 HFM1A2PYH4 1435 aa24.4■■□□□ 1.5
VMA21-202ENST00000370361 ADAMTS13Q76LX8 1427 aa24.39■■□□□ 1.5
VMA21-202ENST00000370361 TRPM2O94759 1503 aa24.39■■□□□ 1.49
VMA21-202ENST00000370361 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
VMA21-202ENST00000370361 ROBO1Q9Y6N7 1651 aa24.34■■□□□ 1.49
VMA21-202ENST00000370361 PHF23Q9BUL5 403 aaPredicted RBP24.33■■□□□ 1.49
VMA21-202ENST00000370361 SLAIN2Q9P270 581 aa24.3■■□□□ 1.48
VMA21-202ENST00000370361 CLTCL1P53675 1640 aa24.29■■□□□ 1.48
VMA21-202ENST00000370361 KIF1BO60333 1816 aa24.29■■□□□ 1.48
VMA21-202ENST00000370361 ZNF326Q5BKZ1 582 aaKnown RBP24.29■■□□□ 1.48
VMA21-202ENST00000370361 NUTM2DQ5VT03 806 aaPredicted RBP24.28■■□□□ 1.48
VMA21-202ENST00000370361 CADPS2Q86UW7 1296 aa24.28■■□□□ 1.48
VMA21-202ENST00000370361 ACIN1Q9UKV3 1341 aaKnown RBP24.28■■□□□ 1.48
VMA21-202ENST00000370361 C19orf44Q9H6X5 657 aa24.27■■□□□ 1.48
VMA21-202ENST00000370361 NRXN3Q9Y4C0 1643 aa24.26■■□□□ 1.47
VMA21-202ENST00000370361 C14orf37Q86TY3 774 aa24.26■■□□□ 1.47
VMA21-202ENST00000370361 RBM33Q96EV2 1170 aaKnown RBP24.26■■□□□ 1.47
VMA21-202ENST00000370361 DCCP43146 1447 aa24.26■■□□□ 1.47
VMA21-202ENST00000370361 TRIM52Q96A61 297 aa24.25■■□□□ 1.47
VMA21-202ENST00000370361 NEXMIFQ5QGS0 1516 aa24.25■■□□□ 1.47
VMA21-202ENST00000370361 SENP3Q9H4L4 574 aaPredicted RBP24.24■■□□□ 1.47
VMA21-202ENST00000370361 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
VMA21-202ENST00000370361 XRN1Q8IZH2 1706 aaKnown RBP24.24■■□□□ 1.47
VMA21-202ENST00000370361 ATF3P18847 181 aa24.23■■□□□ 1.47
VMA21-202ENST00000370361 SLC4A1APQ9BWU0 796 aaKnown RBP24.23■■□□□ 1.47
VMA21-202ENST00000370361 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.22■■□□□ 1.47
VMA21-202ENST00000370361 RPGRIP1LQ68CZ1 1315 aa24.21■■□□□ 1.47
VMA21-202ENST00000370361 PTPRUQ92729 1446 aa24.2■■□□□ 1.46
VMA21-202ENST00000370361 VGFO15240 615 aaPredicted RBP24.2■■□□□ 1.46
VMA21-202ENST00000370361 PHLPP1O60346 1717 aa24.2■■□□□ 1.46
VMA21-202ENST00000370361 JCADQ9P266 1359 aa24.17■■□□□ 1.46
VMA21-202ENST00000370361 AHDC1Q5TGY3 1603 aaPredicted RBP24.15■■□□□ 1.46
VMA21-202ENST00000370361 METP08581 1390 aa24.15■■□□□ 1.46
VMA21-202ENST00000370361 COL16A1Q07092 1604 aaPredicted RBP24.13■■□□□ 1.45
VMA21-202ENST00000370361 PRAG1Q86YV5 1406 aa24.12■■□□□ 1.45
VMA21-202ENST00000370361 PTCH1Q13635 1447 aa24.11■■□□□ 1.45
VMA21-202ENST00000370361 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
VMA21-202ENST00000370361 CCDC144AA2RUR9 1427 aa24.1■■□□□ 1.45
VMA21-202ENST00000370361 SPATA31A6Q5VVP1 1343 aa24.1■■□□□ 1.45
VMA21-202ENST00000370361 PPLO60437 1756 aa24.09■■□□□ 1.45
VMA21-202ENST00000370361 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
VMA21-202ENST00000370361 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
VMA21-202ENST00000370361 MST1RQ04912 1400 aa24.05■■□□□ 1.44
VMA21-202ENST00000370361 BRINP3Q76B58 766 aa24.05■■□□□ 1.44
VMA21-202ENST00000370361 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
VMA21-202ENST00000370361 MPHOSPH9Q99550 1183 aa24.04■■□□□ 1.44
VMA21-202ENST00000370361 ASXL1Q8IXJ9 1541 aa24.04■■□□□ 1.44
VMA21-202ENST00000370361 ANKRD30BQ9BXX2 1392 aa24.03■■□□□ 1.44
VMA21-202ENST00000370361 NALCNQ8IZF0 1738 aa24.01■■□□□ 1.43
VMA21-202ENST00000370361 NHSL1Q5SYE7 1610 aa24■■□□□ 1.43
VMA21-202ENST00000370361 SPATA31E1Q6ZUB1 1445 aa24■■□□□ 1.43
VMA21-202ENST00000370361 SETD5Q9C0A6 1442 aa24■■□□□ 1.43
VMA21-202ENST00000370361 ROBO2Q9HCK4 1378 aa23.96■■□□□ 1.43
VMA21-202ENST00000370361 FOXD1Q16676 465 aa23.96■■□□□ 1.43
VMA21-202ENST00000370361 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
VMA21-202ENST00000370361 LRRC59Q96AG4 307 aaKnown RBP23.95■■□□□ 1.42
VMA21-202ENST00000370361 LAMC1P11047 1609 aa23.93■■□□□ 1.42
VMA21-202ENST00000370361 MEX3CQ5U5Q3 659 aaKnown RBP23.93■■□□□ 1.42
VMA21-202ENST00000370361 C1orf167Q5SNV9 1468 aa23.93■■□□□ 1.42
VMA21-202ENST00000370361 ZNF772Q68DY9 489 aaPredicted RBP23.92■■□□□ 1.42
VMA21-202ENST00000370361 POTEAQ6S8J7 498 aa23.92■■□□□ 1.42
VMA21-202ENST00000370361 TECPR2O15040 1411 aa23.92■■□□□ 1.42
VMA21-202ENST00000370361 LRP6O75581 1613 aa23.92■■□□□ 1.42
VMA21-202ENST00000370361 PIK3C2GO75747 1445 aa23.9■■□□□ 1.42
VMA21-202ENST00000370361 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
VMA21-202ENST00000370361 ADGRF5Q8IZF2 1346 aa23.89■■□□□ 1.42
VMA21-202ENST00000370361 RGL3Q3MIN7 710 aa23.89■■□□□ 1.41
VMA21-202ENST00000370361 LRPPRCP42704 1394 aaKnown RBP23.89■■□□□ 1.41
VMA21-202ENST00000370361 KNDC1Q76NI1 1749 aa23.88■■□□□ 1.41
VMA21-202ENST00000370361 ABCC11Q96J66 1382 aa23.88■■□□□ 1.41
VMA21-202ENST00000370361 RAB3GAP2Q9H2M9 1393 aa23.86■■□□□ 1.41
VMA21-202ENST00000370361 MYOM2P54296 1465 aa23.86■■□□□ 1.41
VMA21-202ENST00000370361 NRXN1Q9ULB1 1477 aa23.83■■□□□ 1.41
VMA21-202ENST00000370361 PNPLA6Q8IY17 1366 aa23.83■■□□□ 1.41
VMA21-202ENST00000370361 HRCP23327 699 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms