RNA–Protein interactions for RNA: ENST00000369600.5

PHTF1-203, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 5 BASIC

Gene PHTF1, Length 3,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-203ENST00000369600 SEC24BO95487 1268 aa18.51■□□□□ 0.55
PHTF1-203ENST00000369600 SPRYD3Q8NCJ5 442 aa18.51■□□□□ 0.55
PHTF1-203ENST00000369600 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
PHTF1-203ENST00000369600 RRP7AQ9Y3A4 280 aaKnown RBP18.5■□□□□ 0.55
PHTF1-203ENST00000369600 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
PHTF1-203ENST00000369600 POGKQ9P215 609 aa18.48■□□□□ 0.55
PHTF1-203ENST00000369600 SYCP2Q9BX26 1530 aa18.47■□□□□ 0.55
PHTF1-203ENST00000369600 NUP160Q12769 1436 aa18.47■□□□□ 0.55
PHTF1-203ENST00000369600 ZNF521Q96K83 1311 aa18.46■□□□□ 0.55
PHTF1-203ENST00000369600 PRDM15P57071 1507 aaPredicted RBP18.46■□□□□ 0.55
PHTF1-203ENST00000369600 ARHGAP5Q13017 1502 aa18.46■□□□□ 0.55
PHTF1-203ENST00000369600 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.55
PHTF1-203ENST00000369600 SAMD9LQ8IVG5 1584 aa18.45■□□□□ 0.54
PHTF1-203ENST00000369600 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
PHTF1-203ENST00000369600 ABCA8O94911 1581 aa18.44■□□□□ 0.54
PHTF1-203ENST00000369600 CDCA8Q53HL2 280 aa18.43■□□□□ 0.54
PHTF1-203ENST00000369600 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
PHTF1-203ENST00000369600 CENPJQ9HC77 1338 aaPredicted RBP18.43■□□□□ 0.54
PHTF1-203ENST00000369600 E9PSI1 815 aa18.42■□□□□ 0.54
PHTF1-203ENST00000369600 TNNQ9UQP3 1299 aa18.42■□□□□ 0.54
PHTF1-203ENST00000369600 NKTRP30414 1462 aaKnown RBP18.4■□□□□ 0.54
PHTF1-203ENST00000369600 MYO5CQ9NQX4 1742 aa18.4■□□□□ 0.54
PHTF1-203ENST00000369600 BECN1Q14457 450 aa18.39■□□□□ 0.54
PHTF1-203ENST00000369600 GZF1Q9H116 711 aaPredicted RBP18.39■□□□□ 0.54
PHTF1-203ENST00000369600 ARHGEF5Q12774 1597 aa18.39■□□□□ 0.53
PHTF1-203ENST00000369600 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
PHTF1-203ENST00000369600 INSRP06213 1382 aa18.38■□□□□ 0.53
PHTF1-203ENST00000369600 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
PHTF1-203ENST00000369600 USP19O94966 1318 aa18.38■□□□□ 0.53
PHTF1-203ENST00000369600 CDC42BPBQ9Y5S2 1711 aa18.38■□□□□ 0.53
PHTF1-203ENST00000369600 CHGAP10645 457 aaKnown RBP18.36■□□□□ 0.53
PHTF1-203ENST00000369600 UPF2Q9HAU5 1272 aaKnown RBP18.36■□□□□ 0.53
PHTF1-203ENST00000369600 CGNL1Q0VF96 1302 aa18.36■□□□□ 0.53
PHTF1-203ENST00000369600 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
PHTF1-203ENST00000369600 ASXL1Q8IXJ9 1541 aa18.35■□□□□ 0.53
PHTF1-203ENST00000369600 WWC1Q8IX03 1113 aa18.35■□□□□ 0.53
PHTF1-203ENST00000369600 TRMT2AQ8IZ69 625 aaKnown RBP18.35■□□□□ 0.53
PHTF1-203ENST00000369600 AFAP1Q8N556 730 aa18.34■□□□□ 0.53
PHTF1-203ENST00000369600 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
PHTF1-203ENST00000369600 CARD14Q9BXL6 1004 aa18.34■□□□□ 0.53
PHTF1-203ENST00000369600 RLBP1P12271 317 aa18.33■□□□□ 0.53
PHTF1-203ENST00000369600 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
PHTF1-203ENST00000369600 MAPK8IP3Q9UPT6 1336 aa18.32■□□□□ 0.52
PHTF1-203ENST00000369600 PDE3AQ14432 1141 aa18.31■□□□□ 0.52
PHTF1-203ENST00000369600 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
PHTF1-203ENST00000369600 PDZRN3Q9UPQ7 1066 aa18.31■□□□□ 0.52
PHTF1-203ENST00000369600 PIK3C2GO75747 1445 aa18.3■□□□□ 0.52
PHTF1-203ENST00000369600 TTC37Q6PGP7 1564 aa18.3■□□□□ 0.52
PHTF1-203ENST00000369600 PREX2Q70Z35 1606 aa18.3■□□□□ 0.52
PHTF1-203ENST00000369600 SCAF11Q99590 1463 aaKnown RBP18.29■□□□□ 0.52
PHTF1-203ENST00000369600 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
PHTF1-203ENST00000369600 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
PHTF1-203ENST00000369600 TBC1D2Q9BYX2 928 aa18.28■□□□□ 0.52
PHTF1-203ENST00000369600 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
PHTF1-203ENST00000369600 SPAG9O60271 1321 aaKnown RBP18.27■□□□□ 0.52
PHTF1-203ENST00000369600 UNC13BO14795 1591 aa18.27■□□□□ 0.52
PHTF1-203ENST00000369600 EFCAB2Q5VUJ9 269 aa18.27■□□□□ 0.52
PHTF1-203ENST00000369600 RARSP54136 660 aaKnown RBP18.27■□□□□ 0.52
PHTF1-203ENST00000369600 KIF3BO15066 747 aa18.26■□□□□ 0.51
PHTF1-203ENST00000369600 FAM43AQ8N2R8 423 aa18.26■□□□□ 0.51
PHTF1-203ENST00000369600 LAMC1P11047 1609 aa18.26■□□□□ 0.51
PHTF1-203ENST00000369600 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
PHTF1-203ENST00000369600 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
PHTF1-203ENST00000369600 FTSJ3Q8IY81 847 aaKnown RBP18.25■□□□□ 0.51
PHTF1-203ENST00000369600 PMFBP1Q8TBY8 1022 aa18.25■□□□□ 0.51
PHTF1-203ENST00000369600 IQGAP3Q86VI3 1631 aa18.25■□□□□ 0.51
PHTF1-203ENST00000369600 RRAGDQ9NQL2 400 aaPredicted RBP18.24■□□□□ 0.51
PHTF1-203ENST00000369600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.24■□□□□ 0.51
PHTF1-203ENST00000369600 MAST1Q9Y2H9 1570 aa18.24■□□□□ 0.51
PHTF1-203ENST00000369600 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
PHTF1-203ENST00000369600 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
PHTF1-203ENST00000369600 SYNMO15061 1565 aa18.22■□□□□ 0.51
PHTF1-203ENST00000369600 U2AF1L5P0DN76 240 aaPredicted RBP18.22■□□□□ 0.51
PHTF1-203ENST00000369600 MTHFSP49914 203 aa18.22■□□□□ 0.51
PHTF1-203ENST00000369600 U2AF1Q01081 240 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHTF1-203ENST00000369600 TSR2Q969E8 191 aaKnown RBP18.22■□□□□ 0.51
PHTF1-203ENST00000369600 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
PHTF1-203ENST00000369600 PANK2Q9BZ23 570 aa18.22■□□□□ 0.51
PHTF1-203ENST00000369600 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
PHTF1-203ENST00000369600 RUNDC1Q96C34 613 aa18.21■□□□□ 0.51
PHTF1-203ENST00000369600 RWDD1Q9H446 243 aaPredicted RBP18.21■□□□□ 0.51
PHTF1-203ENST00000369600 MADDQ8WXG6 1647 aa18.21■□□□□ 0.51
PHTF1-203ENST00000369600 CHD1O14646 1710 aa18.2■□□□□ 0.5
PHTF1-203ENST00000369600 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
PHTF1-203ENST00000369600 TMEM132EQ6IEE7 984 aa18.2■□□□□ 0.5
PHTF1-203ENST00000369600 RNF17Q9BXT8 1623 aaKnown RBP18.2■□□□□ 0.5
PHTF1-203ENST00000369600 L1TD1Q5T7N2 865 aaKnown RBP18.19■□□□□ 0.5
PHTF1-203ENST00000369600 ANTXR1Q9H6X2 564 aa18.19■□□□□ 0.5
PHTF1-203ENST00000369600 RSPH6AQ9H0K4 717 aa18.19■□□□□ 0.5
PHTF1-203ENST00000369600 ABCC2Q92887 1545 aa18.19■□□□□ 0.5
PHTF1-203ENST00000369600 GOLGA6L3A6NEY3 463 aa18.19■□□□□ 0.5
PHTF1-203ENST00000369600 NSD3Q9BZ95 1437 aa18.19■□□□□ 0.5
PHTF1-203ENST00000369600 ATP10AO60312 1499 aa18.18■□□□□ 0.5
PHTF1-203ENST00000369600 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
PHTF1-203ENST00000369600 ITPRIPQ8IWB1 547 aa18.18■□□□□ 0.5
PHTF1-203ENST00000369600 NAP1L5Q96NT1 182 aaPredicted RBP18.17■□□□□ 0.5
PHTF1-203ENST00000369600 IQGAP1P46940 1657 aa18.17■□□□□ 0.5
PHTF1-203ENST00000369600 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
PHTF1-203ENST00000369600 CLASP1Q7Z460 1538 aa18.17■□□□□ 0.5
PHTF1-203ENST00000369600 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms