RNA–Protein interactions for RNA: ENST00000369487.3

CD58-201, Transcript of CD58 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD58, Length 892 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-201ENST00000369487 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.58■■■□□ 2.49
CD58-201ENST00000369487 KIF1BO60333 1816 aa30.58■■■□□ 2.49
CD58-201ENST00000369487 CCDC144AA2RUR9 1427 aa30.56■■■□□ 2.48
CD58-201ENST00000369487 PPP1R15AO75807 674 aaPredicted RBP30.54■■■□□ 2.48
CD58-201ENST00000369487 ZNF326Q5BKZ1 582 aaKnown RBP30.52■■■□□ 2.48
CD58-201ENST00000369487 LTBP4Q8N2S1 1624 aa30.51■■■□□ 2.48
CD58-201ENST00000369487 ZNF335Q9H4Z2 1342 aaPredicted RBP30.51■■■□□ 2.48
CD58-201ENST00000369487 PLEKHG1Q9ULL1 1385 aa30.51■■■□□ 2.47
CD58-201ENST00000369487 CERKQ8TCT0 537 aa30.46■■■□□ 2.47
CD58-201ENST00000369487 BCANQ96GW7 911 aa30.45■■■□□ 2.47
CD58-201ENST00000369487 NEXMIFQ5QGS0 1516 aa30.44■■■□□ 2.46
CD58-201ENST00000369487 RPGRIP1LQ68CZ1 1315 aa30.43■■■□□ 2.46
CD58-201ENST00000369487 CPS1P31327 1500 aa30.42■■■□□ 2.46
CD58-201ENST00000369487 ANKRD30BQ9BXX2 1392 aa30.42■■■□□ 2.46
CD58-201ENST00000369487 NUTM2DQ5VT03 806 aaPredicted RBP30.42■■■□□ 2.46
CD58-201ENST00000369487 SPATA31E1Q6ZUB1 1445 aa30.39■■■□□ 2.46
CD58-201ENST00000369487 SLC26A8Q96RN1 970 aa30.39■■■□□ 2.46
CD58-201ENST00000369487 ILDR1Q86SU0 546 aaPredicted RBP30.38■■■□□ 2.45
CD58-201ENST00000369487 IQSEC2Q5JU85 1478 aa30.38■■■□□ 2.45
CD58-201ENST00000369487 DIP2AQ14689 1571 aa30.37■■■□□ 2.45
CD58-201ENST00000369487 VGFO15240 615 aaPredicted RBP30.35■■■□□ 2.45
CD58-201ENST00000369487 SETBP1Q9Y6X0 1596 aa30.34■■■□□ 2.45
CD58-201ENST00000369487 ADAMTS13Q76LX8 1427 aa30.34■■■□□ 2.45
CD58-201ENST00000369487 TBX22Q9Y458 520 aa30.34■■■□□ 2.45
CD58-201ENST00000369487 PPLO60437 1756 aa30.33■■■□□ 2.45
CD58-201ENST00000369487 SENP3Q9H4L4 574 aaPredicted RBP30.33■■■□□ 2.45
CD58-201ENST00000369487 STRCP1A6NGW2 1772 aa30.31■■■□□ 2.44
CD58-201ENST00000369487 RGL3Q3MIN7 710 aa30.31■■■□□ 2.44
CD58-201ENST00000369487 NRXN3Q9Y4C0 1643 aa30.29■■■□□ 2.44
CD58-201ENST00000369487 KCNA6P17658 529 aa30.29■■■□□ 2.44
CD58-201ENST00000369487 NWD1Q149M9 1564 aa30.28■■■□□ 2.44
CD58-201ENST00000369487 PIK3R4Q99570 1358 aa30.28■■■□□ 2.44
CD58-201ENST00000369487 FBXO41Q8TF61 875 aa30.26■■■□□ 2.43
CD58-201ENST00000369487 IFT172Q9UG01 1749 aa30.26■■■□□ 2.43
CD58-201ENST00000369487 LRRC7Q96NW7 1537 aa30.24■■■□□ 2.43
CD58-201ENST00000369487 NKTRP30414 1462 aaKnown RBP30.24■■■□□ 2.43
CD58-201ENST00000369487 CHD2O14647 1828 aaKnown RBP30.23■■■□□ 2.43
CD58-201ENST00000369487 DHX57Q6P158 1386 aaKnown RBP30.18■■■□□ 2.42
CD58-201ENST00000369487 MYOM2P54296 1465 aa30.17■■■□□ 2.42
CD58-201ENST00000369487 ADGRF5Q8IZF2 1346 aa30.17■■■□□ 2.42
CD58-201ENST00000369487 ALKQ9UM73 1620 aa30.15■■■□□ 2.42
CD58-201ENST00000369487 METP08581 1390 aa30.14■■■□□ 2.41
CD58-201ENST00000369487 PIK3C2GO75747 1445 aa30.13■■■□□ 2.41
CD58-201ENST00000369487 PROSER2Q86WR7 435 aaPredicted RBP30.13■■■□□ 2.41
CD58-201ENST00000369487 SETD1AO15047 1707 aaKnown RBP30.13■■■□□ 2.41
CD58-201ENST00000369487 TMEM94Q12767 1356 aa30.12■■■□□ 2.41
CD58-201ENST00000369487 PTPRUQ92729 1446 aa30.12■■■□□ 2.41
CD58-201ENST00000369487 NRXN1Q9ULB1 1477 aa30.12■■■□□ 2.41
CD58-201ENST00000369487 STAC3Q96MF2 364 aa30.11■■■□□ 2.41
CD58-201ENST00000369487 PCGF6Q9BYE7 350 aa30.11■■■□□ 2.41
CD58-201ENST00000369487 AMOTL2Q9Y2J4 779 aa30.11■■■□□ 2.41
CD58-201ENST00000369487 XRN1Q8IZH2 1706 aaKnown RBP30.1■■■□□ 2.41
CD58-201ENST00000369487 XIRP1Q702N8 1843 aaKnown RBP30.09■■■□□ 2.41
CD58-201ENST00000369487 UBAP1LF5GYI3 381 aa30.08■■■□□ 2.41
CD58-201ENST00000369487 DCAF11Q8TEB1 546 aa30.06■■■□□ 2.4
CD58-201ENST00000369487 NCOA3Q9Y6Q9 1424 aa30.05■■■□□ 2.4
CD58-201ENST00000369487 TOM1O60784 492 aa30.05■■■□□ 2.4
CD58-201ENST00000369487 LAMC1P11047 1609 aa30.04■■■□□ 2.4
CD58-201ENST00000369487 PRAG1Q86YV5 1406 aa30.01■■■□□ 2.39
CD58-201ENST00000369487 RBM33Q96EV2 1170 aaKnown RBP30■■■□□ 2.39
CD58-201ENST00000369487 C14orf93Q9H972 538 aaKnown RBP30■■■□□ 2.39
CD58-201ENST00000369487 KDM2AQ9Y2K7 1162 aa30■■■□□ 2.39
CD58-201ENST00000369487 PTCH1Q13635 1447 aa29.99■■■□□ 2.39
CD58-201ENST00000369487 MSH6P52701 1360 aa29.99■■■□□ 2.39
CD58-201ENST00000369487 SIN3AQ96ST3 1273 aa29.98■■■□□ 2.39
CD58-201ENST00000369487 ASXL1Q8IXJ9 1541 aa29.96■■■□□ 2.39
CD58-201ENST00000369487 C14orf37Q86TY3 774 aa29.96■■■□□ 2.39
CD58-201ENST00000369487 CFAP70Q5T0N1 1121 aa29.95■■■□□ 2.39
CD58-201ENST00000369487 NEUROD1Q13562 356 aa29.94■■■□□ 2.38
CD58-201ENST00000369487 LRPPRCP42704 1394 aaKnown RBP29.93■■■□□ 2.38
CD58-201ENST00000369487 TECPR2O15040 1411 aa29.92■■■□□ 2.38
CD58-201ENST00000369487 TMEM132EQ6IEE7 984 aa29.91■■■□□ 2.38
CD58-201ENST00000369487 C19orf44Q9H6X5 657 aa29.91■■■□□ 2.38
CD58-201ENST00000369487 ABCC11Q96J66 1382 aa29.9■■■□□ 2.38
CD58-201ENST00000369487 ROBO2Q9HCK4 1378 aa29.9■■■□□ 2.38
CD58-201ENST00000369487 YTHDC2Q9H6S0 1430 aaKnown RBP29.9■■■□□ 2.38
CD58-201ENST00000369487 PIP4K2BP78356 416 aa29.9■■■□□ 2.38
CD58-201ENST00000369487 KNDC1Q76NI1 1749 aa29.9■■■□□ 2.38
CD58-201ENST00000369487 SCAF1Q9H7N4 1312 aaKnown RBP29.89■■■□□ 2.38
CD58-201ENST00000369487 L3MBTL2Q969R5 705 aa29.88■■■□□ 2.37
CD58-201ENST00000369487 DCCP43146 1447 aa29.88■■■□□ 2.37
CD58-201ENST00000369487 STK26Q9P289 416 aa29.87■■■□□ 2.37
CD58-201ENST00000369487 ADGRL3Q9HAR2 1447 aa29.87■■■□□ 2.37
CD58-201ENST00000369487 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.86■■■□□ 2.37
CD58-201ENST00000369487 ADGRB1O14514 1584 aa29.86■■■□□ 2.37
CD58-201ENST00000369487 CADPS2Q86UW7 1296 aa29.85■■■□□ 2.37
CD58-201ENST00000369487 ATF3P18847 181 aa29.84■■■□□ 2.37
CD58-201ENST00000369487 KIAA1210Q9ULL0 1709 aa29.83■■■□□ 2.37
CD58-201ENST00000369487 NALCNQ8IZF0 1738 aa29.82■■■□□ 2.36
CD58-201ENST00000369487 FAM135BQ49AJ0 1406 aa29.81■■■□□ 2.36
CD58-201ENST00000369487 SIRT1Q96EB6 747 aa29.81■■■□□ 2.36
CD58-201ENST00000369487 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
CD58-201ENST00000369487 CLSPNQ9HAW4 1339 aa29.79■■■□□ 2.36
CD58-201ENST00000369487 SLAIN2Q9P270 581 aa29.79■■■□□ 2.36
CD58-201ENST00000369487 DLC1Q96QB1 1528 aa29.79■■■□□ 2.36
CD58-201ENST00000369487 WAPLQ7Z5K2 1190 aa29.74■■■□□ 2.35
CD58-201ENST00000369487 ROBO1Q9Y6N7 1651 aa29.72■■■□□ 2.35
CD58-201ENST00000369487 PLEKHH1Q9ULM0 1364 aa29.72■■■□□ 2.35
CD58-201ENST00000369487 TRAK1Q9UPV9 953 aa29.71■■■□□ 2.35
CD58-201ENST00000369487 CDC42BPGQ6DT37 1551 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms