RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.5■□□□□ 0.55
EFNA1-201ENST00000368406 CERKQ8TCT0 537 aa18.49■□□□□ 0.55
EFNA1-201ENST00000368406 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
EFNA1-201ENST00000368406 CLTCL1P53675 1640 aa18.49■□□□□ 0.55
EFNA1-201ENST00000368406 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
EFNA1-201ENST00000368406 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
EFNA1-201ENST00000368406 CCER1Q8TC90 406 aaPredicted RBP18.48■□□□□ 0.55
EFNA1-201ENST00000368406 CCDC144AA2RUR9 1427 aa18.47■□□□□ 0.55
EFNA1-201ENST00000368406 KIF1BO60333 1816 aa18.45■□□□□ 0.54
EFNA1-201ENST00000368406 PLEKHG1Q9ULL1 1385 aa18.45■□□□□ 0.54
EFNA1-201ENST00000368406 PPP1R15AO75807 674 aaPredicted RBP18.45■□□□□ 0.54
EFNA1-201ENST00000368406 ZNF326Q5BKZ1 582 aaKnown RBP18.43■□□□□ 0.54
EFNA1-201ENST00000368406 ANKRD30BQ9BXX2 1392 aa18.42■□□□□ 0.54
EFNA1-201ENST00000368406 CPS1P31327 1500 aa18.42■□□□□ 0.54
EFNA1-201ENST00000368406 RPGRIP1LQ68CZ1 1315 aa18.42■□□□□ 0.54
EFNA1-201ENST00000368406 IQSEC2Q5JU85 1478 aa18.42■□□□□ 0.54
EFNA1-201ENST00000368406 BCANQ96GW7 911 aa18.4■□□□□ 0.54
EFNA1-201ENST00000368406 NUTM2DQ5VT03 806 aaPredicted RBP18.4■□□□□ 0.54
EFNA1-201ENST00000368406 SLC26A8Q96RN1 970 aa18.4■□□□□ 0.54
EFNA1-201ENST00000368406 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
EFNA1-201ENST00000368406 FBXO41Q8TF61 875 aa18.39■□□□□ 0.53
EFNA1-201ENST00000368406 SPATA31E1Q6ZUB1 1445 aa18.37■□□□□ 0.53
EFNA1-201ENST00000368406 NEXMIFQ5QGS0 1516 aa18.37■□□□□ 0.53
EFNA1-201ENST00000368406 VGFO15240 615 aaPredicted RBP18.37■□□□□ 0.53
EFNA1-201ENST00000368406 KCNA6P17658 529 aa18.36■□□□□ 0.53
EFNA1-201ENST00000368406 NEUROD1Q13562 356 aa18.36■□□□□ 0.53
EFNA1-201ENST00000368406 ADAMTS13Q76LX8 1427 aa18.36■□□□□ 0.53
EFNA1-201ENST00000368406 DIP2AQ14689 1571 aa18.35■□□□□ 0.53
EFNA1-201ENST00000368406 STRCP1A6NGW2 1772 aa18.34■□□□□ 0.53
EFNA1-201ENST00000368406 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
EFNA1-201ENST00000368406 SETBP1Q9Y6X0 1596 aa18.33■□□□□ 0.53
EFNA1-201ENST00000368406 CLSPNQ9HAW4 1339 aa18.33■□□□□ 0.52
EFNA1-201ENST00000368406 ILDR1Q86SU0 546 aaPredicted RBP18.32■□□□□ 0.52
EFNA1-201ENST00000368406 SIN3AQ96ST3 1273 aa18.32■□□□□ 0.52
EFNA1-201ENST00000368406 RGL3Q3MIN7 710 aa18.32■□□□□ 0.52
EFNA1-201ENST00000368406 PPLO60437 1756 aa18.31■□□□□ 0.52
EFNA1-201ENST00000368406 SENP3Q9H4L4 574 aaPredicted RBP18.31■□□□□ 0.52
EFNA1-201ENST00000368406 LRRC7Q96NW7 1537 aa18.31■□□□□ 0.52
EFNA1-201ENST00000368406 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
EFNA1-201ENST00000368406 NRXN3Q9Y4C0 1643 aa18.29■□□□□ 0.52
EFNA1-201ENST00000368406 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
EFNA1-201ENST00000368406 NKTRP30414 1462 aaKnown RBP18.28■□□□□ 0.52
EFNA1-201ENST00000368406 TONSLQ96HA7 1378 aa18.28■□□□□ 0.52
EFNA1-201ENST00000368406 PROSER2Q86WR7 435 aaPredicted RBP18.25■□□□□ 0.51
EFNA1-201ENST00000368406 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
EFNA1-201ENST00000368406 ADGRF5Q8IZF2 1346 aa18.24■□□□□ 0.51
EFNA1-201ENST00000368406 METP08581 1390 aa18.24■□□□□ 0.51
EFNA1-201ENST00000368406 UBAP1LF5GYI3 381 aa18.23■□□□□ 0.51
EFNA1-201ENST00000368406 STAC3Q96MF2 364 aa18.23■□□□□ 0.51
EFNA1-201ENST00000368406 AMOTL2Q9Y2J4 779 aa18.23■□□□□ 0.51
EFNA1-201ENST00000368406 TMEM94Q12767 1356 aa18.23■□□□□ 0.51
EFNA1-201ENST00000368406 TOM1O60784 492 aa18.23■□□□□ 0.51
EFNA1-201ENST00000368406 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
EFNA1-201ENST00000368406 ALKQ9UM73 1620 aa18.22■□□□□ 0.51
EFNA1-201ENST00000368406 NCOA3Q9Y6Q9 1424 aa18.21■□□□□ 0.51
EFNA1-201ENST00000368406 XIRP1Q702N8 1843 aaKnown RBP18.21■□□□□ 0.51
EFNA1-201ENST00000368406 MYOM2P54296 1465 aa18.21■□□□□ 0.51
EFNA1-201ENST00000368406 PIK3C2GO75747 1445 aa18.2■□□□□ 0.5
EFNA1-201ENST00000368406 DCAF11Q8TEB1 546 aa18.2■□□□□ 0.5
EFNA1-201ENST00000368406 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
EFNA1-201ENST00000368406 SETD1AO15047 1707 aaKnown RBP18.19■□□□□ 0.5
EFNA1-201ENST00000368406 KDM2AQ9Y2K7 1162 aa18.19■□□□□ 0.5
EFNA1-201ENST00000368406 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
EFNA1-201ENST00000368406 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
EFNA1-201ENST00000368406 RBM33Q96EV2 1170 aaKnown RBP18.16■□□□□ 0.5
EFNA1-201ENST00000368406 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
EFNA1-201ENST00000368406 PRAG1Q86YV5 1406 aa18.16■□□□□ 0.5
EFNA1-201ENST00000368406 MSH6P52701 1360 aa18.14■□□□□ 0.5
EFNA1-201ENST00000368406 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
EFNA1-201ENST00000368406 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
EFNA1-201ENST00000368406 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
EFNA1-201ENST00000368406 LAMC1P11047 1609 aa18.11■□□□□ 0.49
EFNA1-201ENST00000368406 PIP4K2BP78356 416 aa18.11■□□□□ 0.49
EFNA1-201ENST00000368406 C14orf37Q86TY3 774 aa18.11■□□□□ 0.49
EFNA1-201ENST00000368406 LRPPRCP42704 1394 aaKnown RBP18.1■□□□□ 0.49
EFNA1-201ENST00000368406 CFAP70Q5T0N1 1121 aa18.1■□□□□ 0.49
EFNA1-201ENST00000368406 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
EFNA1-201ENST00000368406 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
EFNA1-201ENST00000368406 TECPR2O15040 1411 aa18.09■□□□□ 0.49
EFNA1-201ENST00000368406 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
EFNA1-201ENST00000368406 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.49
EFNA1-201ENST00000368406 ATF3P18847 181 aa18.07■□□□□ 0.48
EFNA1-201ENST00000368406 SIRT1Q96EB6 747 aa18.07■□□□□ 0.48
EFNA1-201ENST00000368406 ASXL1Q8IXJ9 1541 aa18.07■□□□□ 0.48
EFNA1-201ENST00000368406 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
EFNA1-201ENST00000368406 DCCP43146 1447 aa18.07■□□□□ 0.48
EFNA1-201ENST00000368406 YTHDC2Q9H6S0 1430 aaKnown RBP18.07■□□□□ 0.48
EFNA1-201ENST00000368406 SLAIN2Q9P270 581 aa18.06■□□□□ 0.48
EFNA1-201ENST00000368406 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.06■□□□□ 0.48
EFNA1-201ENST00000368406 FAM135BQ49AJ0 1406 aa18.06■□□□□ 0.48
EFNA1-201ENST00000368406 STK26Q9P289 416 aa18.06■□□□□ 0.48
EFNA1-201ENST00000368406 ADGRL3Q9HAR2 1447 aa18.05■□□□□ 0.48
EFNA1-201ENST00000368406 KIAA1210Q9ULL0 1709 aa18.05■□□□□ 0.48
EFNA1-201ENST00000368406 TRPM1Q7Z4N2 1603 aa18.04■□□□□ 0.48
EFNA1-201ENST00000368406 KNDC1Q76NI1 1749 aa18.04■□□□□ 0.48
EFNA1-201ENST00000368406 ADGRB1O14514 1584 aa18.03■□□□□ 0.48
EFNA1-201ENST00000368406 ZEB1P37275 1124 aaPredicted RBP18.02■□□□□ 0.48
EFNA1-201ENST00000368406 HSPA1LP34931 641 aa18■□□□□ 0.47
EFNA1-201ENST00000368406 WAPLQ7Z5K2 1190 aa18■□□□□ 0.47
EFNA1-201ENST00000368406 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms