RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CERKQ8TCT0 537 aa33.36■■■□□ 2.93
ECHDC1-203ENST00000368291 HRCP23327 699 aa33.35■■■□□ 2.93
ECHDC1-203ENST00000368291 STRCP1A6NGW2 1772 aa33.33■■■□□ 2.93
ECHDC1-203ENST00000368291 PLEKHG1Q9ULL1 1385 aa33.26■■■□□ 2.91
ECHDC1-203ENST00000368291 HDGFP51858 240 aaKnown RBP33.25■■■□□ 2.91
ECHDC1-203ENST00000368291 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.25■■■□□ 2.91
ECHDC1-203ENST00000368291 NUTM2DQ5VT03 806 aaPredicted RBP33.24■■■□□ 2.91
ECHDC1-203ENST00000368291 NEXMIFQ5QGS0 1516 aa33.24■■■□□ 2.91
ECHDC1-203ENST00000368291 PPP1R15AO75807 674 aaPredicted RBP33.21■■■□□ 2.91
ECHDC1-203ENST00000368291 CPS1P31327 1500 aa33.21■■■□□ 2.91
ECHDC1-203ENST00000368291 SLC26A8Q96RN1 970 aa33.21■■■□□ 2.91
ECHDC1-203ENST00000368291 CCDC144AA2RUR9 1427 aa33.2■■■□□ 2.91
ECHDC1-203ENST00000368291 ZNF326Q5BKZ1 582 aaKnown RBP33.2■■■□□ 2.9
ECHDC1-203ENST00000368291 SENP3Q9H4L4 574 aaPredicted RBP33.2■■■□□ 2.9
ECHDC1-203ENST00000368291 IQSEC2Q5JU85 1478 aa33.18■■■□□ 2.9
ECHDC1-203ENST00000368291 ILDR1Q86SU0 546 aaPredicted RBP33.17■■■□□ 2.9
ECHDC1-203ENST00000368291 PPLO60437 1756 aa33.16■■■□□ 2.9
ECHDC1-203ENST00000368291 FBXO41Q8TF61 875 aa33.16■■■□□ 2.9
ECHDC1-203ENST00000368291 NRXN3Q9Y4C0 1643 aa33.15■■■□□ 2.9
ECHDC1-203ENST00000368291 ADAMTS13Q76LX8 1427 aa33.15■■■□□ 2.9
ECHDC1-203ENST00000368291 SPATA31E1Q6ZUB1 1445 aa33.14■■■□□ 2.9
ECHDC1-203ENST00000368291 BCANQ96GW7 911 aa33.13■■■□□ 2.89
ECHDC1-203ENST00000368291 CHD2O14647 1828 aaKnown RBP33.13■■■□□ 2.89
ECHDC1-203ENST00000368291 ANKRD30BQ9BXX2 1392 aa33.12■■■□□ 2.89
ECHDC1-203ENST00000368291 TRIM26Q12899 539 aaPredicted RBP33.11■■■□□ 2.89
ECHDC1-203ENST00000368291 SETBP1Q9Y6X0 1596 aa33.11■■■□□ 2.89
ECHDC1-203ENST00000368291 DIP2AQ14689 1571 aa33.1■■■□□ 2.89
ECHDC1-203ENST00000368291 IFT172Q9UG01 1749 aa33.1■■■□□ 2.89
ECHDC1-203ENST00000368291 LRRC7Q96NW7 1537 aa33.1■■■□□ 2.89
ECHDC1-203ENST00000368291 XIRP1Q702N8 1843 aaKnown RBP33.09■■■□□ 2.89
ECHDC1-203ENST00000368291 NWD1Q149M9 1564 aa33.09■■■□□ 2.89
ECHDC1-203ENST00000368291 TBX22Q9Y458 520 aa33.09■■■□□ 2.89
ECHDC1-203ENST00000368291 RPGRIP1LQ68CZ1 1315 aa33.07■■■□□ 2.88
ECHDC1-203ENST00000368291 KCNA6P17658 529 aa33.05■■■□□ 2.88
ECHDC1-203ENST00000368291 RGL3Q3MIN7 710 aa33.02■■■□□ 2.88
ECHDC1-203ENST00000368291 VGFO15240 615 aaPredicted RBP33■■■□□ 2.87
ECHDC1-203ENST00000368291 SETD1AO15047 1707 aaKnown RBP33■■■□□ 2.87
ECHDC1-203ENST00000368291 NKTRP30414 1462 aaKnown RBP32.98■■■□□ 2.87
ECHDC1-203ENST00000368291 PIK3R4Q99570 1358 aa32.97■■■□□ 2.87
ECHDC1-203ENST00000368291 PTPRUQ92729 1446 aa32.95■■■□□ 2.87
ECHDC1-203ENST00000368291 METP08581 1390 aa32.92■■■□□ 2.86
ECHDC1-203ENST00000368291 ALKQ9UM73 1620 aa32.92■■■□□ 2.86
ECHDC1-203ENST00000368291 XRN1Q8IZH2 1706 aaKnown RBP32.92■■■□□ 2.86
ECHDC1-203ENST00000368291 ADGRF5Q8IZF2 1346 aa32.92■■■□□ 2.86
ECHDC1-203ENST00000368291 TMEM94Q12767 1356 aa32.9■■■□□ 2.86
ECHDC1-203ENST00000368291 UBAP1LF5GYI3 381 aa32.88■■■□□ 2.85
ECHDC1-203ENST00000368291 PROSER2Q86WR7 435 aaPredicted RBP32.88■■■□□ 2.85
ECHDC1-203ENST00000368291 RBM33Q96EV2 1170 aaKnown RBP32.87■■■□□ 2.85
ECHDC1-203ENST00000368291 AMOTL2Q9Y2J4 779 aa32.85■■■□□ 2.85
ECHDC1-203ENST00000368291 MYOM2P54296 1465 aa32.83■■■□□ 2.85
ECHDC1-203ENST00000368291 PIK3C2GO75747 1445 aa32.83■■■□□ 2.85
ECHDC1-203ENST00000368291 NRXN1Q9ULB1 1477 aa32.82■■■□□ 2.84
ECHDC1-203ENST00000368291 DHX57Q6P158 1386 aaKnown RBP32.81■■■□□ 2.84
ECHDC1-203ENST00000368291 TOM1O60784 492 aa32.79■■■□□ 2.84
ECHDC1-203ENST00000368291 NCOA3Q9Y6Q9 1424 aa32.76■■■□□ 2.83
ECHDC1-203ENST00000368291 ASXL1Q8IXJ9 1541 aa32.75■■■□□ 2.83
ECHDC1-203ENST00000368291 PRAG1Q86YV5 1406 aa32.71■■■□□ 2.83
ECHDC1-203ENST00000368291 LAMC1P11047 1609 aa32.71■■■□□ 2.83
ECHDC1-203ENST00000368291 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.71■■■□□ 2.83
ECHDC1-203ENST00000368291 PIP4K2BP78356 416 aa32.7■■■□□ 2.83
ECHDC1-203ENST00000368291 DCAF11Q8TEB1 546 aa32.7■■■□□ 2.83
ECHDC1-203ENST00000368291 MSH6P52701 1360 aa32.69■■■□□ 2.82
ECHDC1-203ENST00000368291 C14orf93Q9H972 538 aaKnown RBP32.69■■■□□ 2.82
ECHDC1-203ENST00000368291 KDM2AQ9Y2K7 1162 aa32.68■■■□□ 2.82
ECHDC1-203ENST00000368291 PTCH1Q13635 1447 aa32.67■■■□□ 2.82
ECHDC1-203ENST00000368291 SIN3AQ96ST3 1273 aa32.66■■■□□ 2.82
ECHDC1-203ENST00000368291 ROBO2Q9HCK4 1378 aa32.66■■■□□ 2.82
ECHDC1-203ENST00000368291 KNDC1Q76NI1 1749 aa32.65■■■□□ 2.82
ECHDC1-203ENST00000368291 CFAP70Q5T0N1 1121 aa32.65■■■□□ 2.82
ECHDC1-203ENST00000368291 NALCNQ8IZF0 1738 aa32.64■■■□□ 2.82
ECHDC1-203ENST00000368291 TMEM132EQ6IEE7 984 aa32.64■■■□□ 2.82
ECHDC1-203ENST00000368291 STAC3Q96MF2 364 aa32.64■■■□□ 2.82
ECHDC1-203ENST00000368291 SCAF1Q9H7N4 1312 aaKnown RBP32.64■■■□□ 2.82
ECHDC1-203ENST00000368291 C19orf44Q9H6X5 657 aa32.61■■■□□ 2.81
ECHDC1-203ENST00000368291 TECPR2O15040 1411 aa32.61■■■□□ 2.81
ECHDC1-203ENST00000368291 LRPPRCP42704 1394 aaKnown RBP32.6■■■□□ 2.81
ECHDC1-203ENST00000368291 C14orf37Q86TY3 774 aa32.6■■■□□ 2.81
ECHDC1-203ENST00000368291 PCGF6Q9BYE7 350 aa32.6■■■□□ 2.81
ECHDC1-203ENST00000368291 YTHDC2Q9H6S0 1430 aaKnown RBP32.58■■■□□ 2.81
ECHDC1-203ENST00000368291 ABCC11Q96J66 1382 aa32.58■■■□□ 2.81
ECHDC1-203ENST00000368291 ADGRB1O14514 1584 aa32.58■■■□□ 2.81
ECHDC1-203ENST00000368291 ADGRL3Q9HAR2 1447 aa32.57■■■□□ 2.8
ECHDC1-203ENST00000368291 STK26Q9P289 416 aa32.57■■■□□ 2.8
ECHDC1-203ENST00000368291 DCCP43146 1447 aa32.56■■■□□ 2.8
ECHDC1-203ENST00000368291 ROBO1Q9Y6N7 1651 aa32.55■■■□□ 2.8
ECHDC1-203ENST00000368291 FAM135BQ49AJ0 1406 aa32.55■■■□□ 2.8
ECHDC1-203ENST00000368291 NEUROD1Q13562 356 aa32.54■■■□□ 2.8
ECHDC1-203ENST00000368291 SLAIN2Q9P270 581 aa32.53■■■□□ 2.8
ECHDC1-203ENST00000368291 HSPA1LP34931 641 aa32.52■■■□□ 2.8
ECHDC1-203ENST00000368291 CADPS2Q86UW7 1296 aa32.52■■■□□ 2.8
ECHDC1-203ENST00000368291 L3MBTL2Q969R5 705 aa32.51■■■□□ 2.79
ECHDC1-203ENST00000368291 KIAA1210Q9ULL0 1709 aa32.51■■■□□ 2.79
ECHDC1-203ENST00000368291 ATF3P18847 181 aa32.5■■■□□ 2.79
ECHDC1-203ENST00000368291 WAPLQ7Z5K2 1190 aa32.48■■■□□ 2.79
ECHDC1-203ENST00000368291 PLEKHH1Q9ULM0 1364 aa32.48■■■□□ 2.79
ECHDC1-203ENST00000368291 MST1RQ04912 1400 aa32.45■■■□□ 2.78
ECHDC1-203ENST00000368291 SIRT1Q96EB6 747 aa32.45■■■□□ 2.78
ECHDC1-203ENST00000368291 DLC1Q96QB1 1528 aa32.44■■■□□ 2.78
ECHDC1-203ENST00000368291 CDC42BPGQ6DT37 1551 aa32.41■■■□□ 2.78
ECHDC1-203ENST00000368291 ARHGEF28Q8N1W1 1705 aaKnown RBP32.38■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms