RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ILDR2Q71H61 639 aa22.61■■□□□ 1.21
CTSD-202ENST00000367196 BCANQ96GW7 911 aa22.61■■□□□ 1.21
CTSD-202ENST00000367196 NUP155O75694 1391 aa22.61■■□□□ 1.21
CTSD-202ENST00000367196 NWD1Q149M9 1564 aa22.6■■□□□ 1.21
CTSD-202ENST00000367196 PPP1R15AO75807 674 aaPredicted RBP22.6■■□□□ 1.21
CTSD-202ENST00000367196 PLEKHG1Q9ULL1 1385 aa22.6■■□□□ 1.21
CTSD-202ENST00000367196 MED1Q15648 1581 aaPredicted RBP22.59■■□□□ 1.21
CTSD-202ENST00000367196 RIMS2Q9UQ26 1411 aa22.59■■□□□ 1.21
CTSD-202ENST00000367196 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.59■■□□□ 1.21
CTSD-202ENST00000367196 SLC26A8Q96RN1 970 aa22.59■■□□□ 1.21
CTSD-202ENST00000367196 SOCS7O14512 581 aa22.57■■□□□ 1.2
CTSD-202ENST00000367196 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
CTSD-202ENST00000367196 TMEM94Q12767 1356 aa22.57■■□□□ 1.2
CTSD-202ENST00000367196 RRBP1Q9P2E9 1410 aaKnown RBP22.56■■□□□ 1.2
CTSD-202ENST00000367196 CHGAP10645 457 aaKnown RBP22.55■■□□□ 1.2
CTSD-202ENST00000367196 DIP2AQ14689 1571 aa22.54■■□□□ 1.2
CTSD-202ENST00000367196 PROSER2Q86WR7 435 aaPredicted RBP22.53■■□□□ 1.2
CTSD-202ENST00000367196 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
CTSD-202ENST00000367196 CHD2O14647 1828 aaKnown RBP22.51■■□□□ 1.19
CTSD-202ENST00000367196 FAM135BQ49AJ0 1406 aa22.5■■□□□ 1.19
CTSD-202ENST00000367196 MSH6P52701 1360 aa22.5■■□□□ 1.19
CTSD-202ENST00000367196 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
CTSD-202ENST00000367196 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
CTSD-202ENST00000367196 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
CTSD-202ENST00000367196 PIK3R4Q99570 1358 aa22.47■■□□□ 1.19
CTSD-202ENST00000367196 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
CTSD-202ENST00000367196 ROBO1Q9Y6N7 1651 aa22.45■■□□□ 1.18
CTSD-202ENST00000367196 TRPM2O94759 1503 aa22.44■■□□□ 1.18
CTSD-202ENST00000367196 NAIPQ13075 1403 aa22.43■■□□□ 1.18
CTSD-202ENST00000367196 ADAMTS13Q76LX8 1427 aa22.43■■□□□ 1.18
CTSD-202ENST00000367196 NUTM2DQ5VT03 806 aaPredicted RBP22.4■■□□□ 1.18
CTSD-202ENST00000367196 RBM33Q96EV2 1170 aaKnown RBP22.4■■□□□ 1.18
CTSD-202ENST00000367196 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
CTSD-202ENST00000367196 ZNF326Q5BKZ1 582 aaKnown RBP22.38■■□□□ 1.17
CTSD-202ENST00000367196 SETBP1Q9Y6X0 1596 aa22.38■■□□□ 1.17
CTSD-202ENST00000367196 KIF1BO60333 1816 aa22.37■■□□□ 1.17
CTSD-202ENST00000367196 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
CTSD-202ENST00000367196 CLTCL1P53675 1640 aa22.37■■□□□ 1.17
CTSD-202ENST00000367196 SLAIN2Q9P270 581 aa22.35■■□□□ 1.17
CTSD-202ENST00000367196 NRXN3Q9Y4C0 1643 aa22.33■■□□□ 1.17
CTSD-202ENST00000367196 PHLPP1O60346 1717 aa22.32■■□□□ 1.16
CTSD-202ENST00000367196 CADPS2Q86UW7 1296 aa22.32■■□□□ 1.16
CTSD-202ENST00000367196 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
CTSD-202ENST00000367196 C19orf44Q9H6X5 657 aa22.31■■□□□ 1.16
CTSD-202ENST00000367196 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
CTSD-202ENST00000367196 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.31■■□□□ 1.16
CTSD-202ENST00000367196 NEXMIFQ5QGS0 1516 aa22.31■■□□□ 1.16
CTSD-202ENST00000367196 ATF3P18847 181 aa22.3■■□□□ 1.16
CTSD-202ENST00000367196 XRN1Q8IZH2 1706 aaKnown RBP22.3■■□□□ 1.16
CTSD-202ENST00000367196 DCCP43146 1447 aa22.28■■□□□ 1.16
CTSD-202ENST00000367196 PTPRUQ92729 1446 aa22.28■■□□□ 1.16
CTSD-202ENST00000367196 SLC4A1APQ9BWU0 796 aaKnown RBP22.27■■□□□ 1.16
CTSD-202ENST00000367196 JCADQ9P266 1359 aa22.25■■□□□ 1.15
CTSD-202ENST00000367196 COL16A1Q07092 1604 aaPredicted RBP22.23■■□□□ 1.15
CTSD-202ENST00000367196 AHDC1Q5TGY3 1603 aaPredicted RBP22.23■■□□□ 1.15
CTSD-202ENST00000367196 VGFO15240 615 aaPredicted RBP22.22■■□□□ 1.15
CTSD-202ENST00000367196 RPGRIP1LQ68CZ1 1315 aa22.21■■□□□ 1.15
CTSD-202ENST00000367196 METP08581 1390 aa22.21■■□□□ 1.15
CTSD-202ENST00000367196 ACIN1Q9UKV3 1341 aaKnown RBP22.19■■□□□ 1.14
CTSD-202ENST00000367196 ADGRL3Q9HAR2 1447 aa22.17■■□□□ 1.14
CTSD-202ENST00000367196 PPLO60437 1756 aa22.17■■□□□ 1.14
CTSD-202ENST00000367196 PTCH1Q13635 1447 aa22.16■■□□□ 1.14
CTSD-202ENST00000367196 SPATA31A6Q5VVP1 1343 aa22.16■■□□□ 1.14
CTSD-202ENST00000367196 CCDC144AA2RUR9 1427 aa22.15■■□□□ 1.14
CTSD-202ENST00000367196 SETD1AO15047 1707 aaKnown RBP22.15■■□□□ 1.14
CTSD-202ENST00000367196 SHPRHQ149N8 1683 aa22.15■■□□□ 1.14
CTSD-202ENST00000367196 RGS17Q9UGC6 210 aaPredicted RBP22.15■■□□□ 1.14
CTSD-202ENST00000367196 BRINP3Q76B58 766 aa22.14■■□□□ 1.13
CTSD-202ENST00000367196 ASXL1Q8IXJ9 1541 aa22.14■■□□□ 1.13
CTSD-202ENST00000367196 NALCNQ8IZF0 1738 aa22.14■■□□□ 1.13
CTSD-202ENST00000367196 MST1RQ04912 1400 aa22.14■■□□□ 1.13
CTSD-202ENST00000367196 PRAG1Q86YV5 1406 aa22.12■■□□□ 1.13
CTSD-202ENST00000367196 NHSL1Q5SYE7 1610 aa22.1■■□□□ 1.13
CTSD-202ENST00000367196 MEX3CQ5U5Q3 659 aaKnown RBP22.08■■□□□ 1.13
CTSD-202ENST00000367196 MPHOSPH9Q99550 1183 aa22.08■■□□□ 1.13
CTSD-202ENST00000367196 FOXD1Q16676 465 aa22.06■■□□□ 1.12
CTSD-202ENST00000367196 ANKRD30BQ9BXX2 1392 aa22.06■■□□□ 1.12
CTSD-202ENST00000367196 SETD5Q9C0A6 1442 aa22.06■■□□□ 1.12
CTSD-202ENST00000367196 POTEAQ6S8J7 498 aa22.05■■□□□ 1.12
CTSD-202ENST00000367196 LRP6O75581 1613 aa22.05■■□□□ 1.12
CTSD-202ENST00000367196 ROBO2Q9HCK4 1378 aa22.04■■□□□ 1.12
CTSD-202ENST00000367196 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
CTSD-202ENST00000367196 LRRC59Q96AG4 307 aaKnown RBP22.03■■□□□ 1.12
CTSD-202ENST00000367196 SPATA31E1Q6ZUB1 1445 aa22.03■■□□□ 1.12
CTSD-202ENST00000367196 ZNF772Q68DY9 489 aaPredicted RBP22.02■■□□□ 1.12
CTSD-202ENST00000367196 C1orf167Q5SNV9 1468 aa22.02■■□□□ 1.12
CTSD-202ENST00000367196 RGL3Q3MIN7 710 aa22■■□□□ 1.11
CTSD-202ENST00000367196 LAMC1P11047 1609 aa21.99■■□□□ 1.11
CTSD-202ENST00000367196 CDC42BPGQ6DT37 1551 aa21.98■■□□□ 1.11
CTSD-202ENST00000367196 ADGRF5Q8IZF2 1346 aa21.97■■□□□ 1.11
CTSD-202ENST00000367196 KNDC1Q76NI1 1749 aa21.97■■□□□ 1.11
CTSD-202ENST00000367196 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
CTSD-202ENST00000367196 TECPR2O15040 1411 aa21.96■■□□□ 1.11
CTSD-202ENST00000367196 NUTM2BA6NNL0 878 aaPredicted RBP21.95■■□□□ 1.1
CTSD-202ENST00000367196 NUTM2EB1AL46 878 aaPredicted RBP21.95■■□□□ 1.1
CTSD-202ENST00000367196 NUTM2AQ8IVF1 878 aaPredicted RBP21.95■■□□□ 1.1
CTSD-202ENST00000367196 LRPPRCP42704 1394 aaKnown RBP21.94■■□□□ 1.1
CTSD-202ENST00000367196 PNPLA6Q8IY17 1366 aa21.93■■□□□ 1.1
CTSD-202ENST00000367196 RAB3GAP2Q9H2M9 1393 aa21.92■■□□□ 1.1
CTSD-202ENST00000367196 MYOM2P54296 1465 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms