RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 SETQ01105 290 aaPredicted RBP19.24■□□□□ 0.67
NUCKS1-201ENST00000367142 ERICH2A1L162 156 aa19.24■□□□□ 0.67
NUCKS1-201ENST00000367142 ELL2O00472 640 aaPredicted RBP19.24■□□□□ 0.67
NUCKS1-201ENST00000367142 TRDNQ13061 729 aa19.24■□□□□ 0.67
NUCKS1-201ENST00000367142 IPO7O95373 1038 aaKnown RBP19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 CPLX1O14810 134 aa19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 ZKSCAN1P17029 563 aaPredicted RBP19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 ZKSCAN2Q63HK3 967 aa19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 PHF23Q9BUL5 403 aaPredicted RBP19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 HOOK1Q9UJC3 728 aaKnown RBP19.23■□□□□ 0.67
NUCKS1-201ENST00000367142 SMARCA2P51531 1590 aa19.22■□□□□ 0.67
NUCKS1-201ENST00000367142 L3MBTL2Q969R5 705 aa19.22■□□□□ 0.67
NUCKS1-201ENST00000367142 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
NUCKS1-201ENST00000367142 CCAR2Q8N163 923 aaKnown RBP19.21■□□□□ 0.67
NUCKS1-201ENST00000367142 ANO2Q9NQ90 1003 aa19.21■□□□□ 0.67
NUCKS1-201ENST00000367142 WASHC2AQ641Q2 1341 aa19.21■□□□□ 0.67
NUCKS1-201ENST00000367142 NFXL1Q6ZNB6 911 aa19.2■□□□□ 0.66
NUCKS1-201ENST00000367142 GPS2Q13227 327 aa19.19■□□□□ 0.66
NUCKS1-201ENST00000367142 G3BP1Q13283 466 aaKnown RBP eCLIP19.19■□□□□ 0.66
NUCKS1-201ENST00000367142 E9PSI1 815 aa19.19■□□□□ 0.66
NUCKS1-201ENST00000367142 MINK1Q8N4C8 1332 aaPredicted RBP19.19■□□□□ 0.66
NUCKS1-201ENST00000367142 PANK3Q9H999 370 aa19.18■□□□□ 0.66
NUCKS1-201ENST00000367142 RNF20Q5VTR2 975 aa19.18■□□□□ 0.66
NUCKS1-201ENST00000367142 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.18■□□□□ 0.66
NUCKS1-201ENST00000367142 ROCK1Q13464 1354 aa19.18■□□□□ 0.66
NUCKS1-201ENST00000367142 IPO9Q96P70 1041 aaKnown RBP19.17■□□□□ 0.66
NUCKS1-201ENST00000367142 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
NUCKS1-201ENST00000367142 ATF3P18847 181 aa19.17■□□□□ 0.66
NUCKS1-201ENST00000367142 JPH4Q96JJ6 628 aa19.16■□□□□ 0.66
NUCKS1-201ENST00000367142 REC8O95072 547 aa19.16■□□□□ 0.66
NUCKS1-201ENST00000367142 R3HCC1Q9Y3T6 440 aaKnown RBP19.16■□□□□ 0.66
NUCKS1-201ENST00000367142 SKOR2Q2VWA4 1001 aaPredicted RBP19.16■□□□□ 0.66
NUCKS1-201ENST00000367142 CENPQQ7L2Z9 268 aaPredicted RBP19.16■□□□□ 0.66
NUCKS1-201ENST00000367142 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
NUCKS1-201ENST00000367142 SAMD1Q6SPF0 538 aaPredicted RBP19.15■□□□□ 0.66
NUCKS1-201ENST00000367142 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.15■□□□□ 0.662e-7■■■□□ 18.1
NUCKS1-201ENST00000367142 API5Q9BZZ5 524 aaKnown RBP19.14■□□□□ 0.65
NUCKS1-201ENST00000367142 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
NUCKS1-201ENST00000367142 DDX49Q9Y6V7 483 aaKnown RBP19.13■□□□□ 0.65
NUCKS1-201ENST00000367142 BCL2L13Q9BXK5 485 aa19.13■□□□□ 0.65
NUCKS1-201ENST00000367142 FHOD3Q2V2M9 1422 aa19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 SAFBQ15424 915 aaKnown RBP eCLIP19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 CYB5RLQ6IPT4 315 aa19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 HSP90AB4PQ58FF6 505 aa19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 NECTIN2Q92692 538 aa19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 CT47A1Q5JQC4 288 aaPredicted RBP19.12■□□□□ 0.65
NUCKS1-201ENST00000367142 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
NUCKS1-201ENST00000367142 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
NUCKS1-201ENST00000367142 ODF2Q5BJF6 829 aa19.11■□□□□ 0.65
NUCKS1-201ENST00000367142 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
NUCKS1-201ENST00000367142 FKBP5Q13451 457 aaPredicted RBP19.1■□□□□ 0.65
NUCKS1-201ENST00000367142 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
NUCKS1-201ENST00000367142 ST20-MTHFSA0A0A6YYL1 179 aa19.09■□□□□ 0.65
NUCKS1-201ENST00000367142 BRMS1Q9HCU9 246 aa19.09■□□□□ 0.65
NUCKS1-201ENST00000367142 ERC2O15083 957 aa19.08■□□□□ 0.65
NUCKS1-201ENST00000367142 BICD2Q8TD16 824 aa19.08■□□□□ 0.65
NUCKS1-201ENST00000367142 FAM161AQ3B820 660 aa19.08■□□□□ 0.65
NUCKS1-201ENST00000367142 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
NUCKS1-201ENST00000367142 PATL2C9JE40 543 aaKnown RBP19.08■□□□□ 0.64
NUCKS1-201ENST00000367142 PTPRGP23470 1445 aa19.07■□□□□ 0.64
NUCKS1-201ENST00000367142 RIC3Q7Z5B4 369 aa19.07■□□□□ 0.64
NUCKS1-201ENST00000367142 RIPK4P57078 832 aa19.06■□□□□ 0.64
NUCKS1-201ENST00000367142 RALYLQ86SE5 291 aaKnown RBP19.06■□□□□ 0.64
NUCKS1-201ENST00000367142 FYB1O15117 783 aa19.06■□□□□ 0.64
NUCKS1-201ENST00000367142 WWC2Q6AWC2 1192 aa19.06■□□□□ 0.64
NUCKS1-201ENST00000367142 TSPYL4Q9UJ04 414 aa19.06■□□□□ 0.64
NUCKS1-201ENST00000367142 OSCARQ8IYS5 282 aa19.05■□□□□ 0.64
NUCKS1-201ENST00000367142 CDR1P51861 262 aa19.05■□□□□ 0.64
NUCKS1-201ENST00000367142 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 NAP1L1P55209 391 aaKnown RBP19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 ZNF592Q92610 1267 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 XBP1P17861 261 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 IKQ13123 557 aaPredicted RBP19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 NEUROD6Q96NK8 337 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 EPS15P42566 896 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 WASHC4Q2M389 1173 aa19.04■□□□□ 0.64
NUCKS1-201ENST00000367142 CCAR1Q8IX12 1150 aaKnown RBP19.03■□□□□ 0.64
NUCKS1-201ENST00000367142 COG6Q9Y2V7 657 aa19.02■□□□□ 0.64
NUCKS1-201ENST00000367142 GNAI1P63096 354 aa19.02■□□□□ 0.63
NUCKS1-201ENST00000367142 TMEM132AQ24JP5 1023 aa19.02■□□□□ 0.63
NUCKS1-201ENST00000367142 HOMER1Q86YM7 354 aa19.02■□□□□ 0.63
NUCKS1-201ENST00000367142 SMC3Q9UQE7 1217 aa19.01■□□□□ 0.63
NUCKS1-201ENST00000367142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.01■□□□□ 0.63
NUCKS1-201ENST00000367142 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
NUCKS1-201ENST00000367142 RRP12Q5JTH9 1297 aaKnown RBP19.01■□□□□ 0.63
NUCKS1-201ENST00000367142 MIA2Q96PC5 1412 aa19■□□□□ 0.63
NUCKS1-201ENST00000367142 INTS3Q68E01 1043 aaKnown RBP19■□□□□ 0.63
NUCKS1-201ENST00000367142 CCDC73Q6ZRK6 1079 aa19■□□□□ 0.63
NUCKS1-201ENST00000367142 SF3B2Q13435 895 aaKnown RBP19■□□□□ 0.63
NUCKS1-201ENST00000367142 SASS6Q6UVJ0 657 aa19■□□□□ 0.63
NUCKS1-201ENST00000367142 RDXP35241 583 aaKnown RBP19■□□□□ 0.63
NUCKS1-201ENST00000367142 VPS37CA5D8V6 355 aaPredicted RBP19■□□□□ 0.63
NUCKS1-201ENST00000367142 RUFY1Q96T51 708 aa18.99■□□□□ 0.63
NUCKS1-201ENST00000367142 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
NUCKS1-201ENST00000367142 DHX57Q6P158 1386 aaKnown RBP18.99■□□□□ 0.63
NUCKS1-201ENST00000367142 CADPSQ9ULU8 1353 aa18.99■□□□□ 0.63
NUCKS1-201ENST00000367142 ZFYVE27Q5T4F4 411 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 550.7 ms