RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 TXNDC2Q86VQ3 553 aa22.99■■□□□ 1.27
PRKN-203ENST00000366894 STAG3Q9UJ98 1225 aa22.99■■□□□ 1.27
PRKN-203ENST00000366894 TMEM131LA2VDJ0 1609 aa22.98■■□□□ 1.27
PRKN-203ENST00000366894 MYO5BQ9ULV0 1848 aa22.97■■□□□ 1.27
PRKN-203ENST00000366894 TRIM52Q96A61 297 aa22.96■■□□□ 1.27
PRKN-203ENST00000366894 SPHKAPQ2M3C7 1700 aa22.95■■□□□ 1.26
PRKN-203ENST00000366894 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
PRKN-203ENST00000366894 ZFYVE9O95405 1425 aa22.93■■□□□ 1.26
PRKN-203ENST00000366894 HRCP23327 699 aa22.93■■□□□ 1.26
PRKN-203ENST00000366894 EID1Q9Y6B2 187 aa22.93■■□□□ 1.26
PRKN-203ENST00000366894 SETD5Q9C0A6 1442 aa22.91■■□□□ 1.26
PRKN-203ENST00000366894 TRIM26Q12899 539 aaPredicted RBP22.91■■□□□ 1.26
PRKN-203ENST00000366894 TRPM2O94759 1503 aa22.88■■□□□ 1.25
PRKN-203ENST00000366894 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
PRKN-203ENST00000366894 CLTCL1P53675 1640 aa22.87■■□□□ 1.25
PRKN-203ENST00000366894 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
PRKN-203ENST00000366894 SLC4A1APQ9BWU0 796 aaKnown RBP22.87■■□□□ 1.25
PRKN-203ENST00000366894 PLEKHG1Q9ULL1 1385 aa22.82■■□□□ 1.24
PRKN-203ENST00000366894 XIRP1Q702N8 1843 aaKnown RBP22.8■■□□□ 1.24
PRKN-203ENST00000366894 FOXD1Q16676 465 aa22.8■■□□□ 1.24
PRKN-203ENST00000366894 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
PRKN-203ENST00000366894 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
PRKN-203ENST00000366894 NUTM2DQ5VT03 806 aaPredicted RBP22.79■■□□□ 1.24
PRKN-203ENST00000366894 MPHOSPH9Q99550 1183 aa22.79■■□□□ 1.24
PRKN-203ENST00000366894 HDGFP51858 240 aaKnown RBP22.78■■□□□ 1.24
PRKN-203ENST00000366894 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKN-203ENST00000366894 PPP1R15AO75807 674 aaPredicted RBP22.76■■□□□ 1.23
PRKN-203ENST00000366894 FAM135BQ49AJ0 1406 aa22.75■■□□□ 1.23
PRKN-203ENST00000366894 RGS17Q9UGC6 210 aaPredicted RBP22.75■■□□□ 1.23
PRKN-203ENST00000366894 ADAMTS13Q76LX8 1427 aa22.74■■□□□ 1.23
PRKN-203ENST00000366894 KIF1BO60333 1816 aa22.74■■□□□ 1.23
PRKN-203ENST00000366894 NEXMIFQ5QGS0 1516 aa22.73■■□□□ 1.23
PRKN-203ENST00000366894 TMEM94Q12767 1356 aa22.73■■□□□ 1.23
PRKN-203ENST00000366894 KCNA6P17658 529 aa22.72■■□□□ 1.23
PRKN-203ENST00000366894 BCANQ96GW7 911 aa22.72■■□□□ 1.23
PRKN-203ENST00000366894 NWD1Q149M9 1564 aa22.72■■□□□ 1.23
PRKN-203ENST00000366894 ZNF326Q5BKZ1 582 aaKnown RBP22.71■■□□□ 1.23
PRKN-203ENST00000366894 TBX22Q9Y458 520 aa22.7■■□□□ 1.22
PRKN-203ENST00000366894 NRXN3Q9Y4C0 1643 aa22.7■■□□□ 1.22
PRKN-203ENST00000366894 ROBO1Q9Y6N7 1651 aa22.69■■□□□ 1.22
PRKN-203ENST00000366894 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
PRKN-203ENST00000366894 CHD2O14647 1828 aaKnown RBP22.68■■□□□ 1.22
PRKN-203ENST00000366894 SETBP1Q9Y6X0 1596 aa22.67■■□□□ 1.22
PRKN-203ENST00000366894 NKTRP30414 1462 aaKnown RBP22.66■■□□□ 1.22
PRKN-203ENST00000366894 RBM33Q96EV2 1170 aaKnown RBP22.66■■□□□ 1.22
PRKN-203ENST00000366894 CCDC144AA2RUR9 1427 aa22.65■■□□□ 1.22
PRKN-203ENST00000366894 PROSER2Q86WR7 435 aaPredicted RBP22.65■■□□□ 1.22
PRKN-203ENST00000366894 SPATA31E1Q6ZUB1 1445 aa22.64■■□□□ 1.21
PRKN-203ENST00000366894 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
PRKN-203ENST00000366894 PIK3R4Q99570 1358 aa22.62■■□□□ 1.21
PRKN-203ENST00000366894 PPLO60437 1756 aa22.61■■□□□ 1.21
PRKN-203ENST00000366894 POTEAQ6S8J7 498 aa22.61■■□□□ 1.21
PRKN-203ENST00000366894 MSH6P52701 1360 aa22.61■■□□□ 1.21
PRKN-203ENST00000366894 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
PRKN-203ENST00000366894 METP08581 1390 aa22.58■■□□□ 1.21
PRKN-203ENST00000366894 VGFO15240 615 aaPredicted RBP22.57■■□□□ 1.2
PRKN-203ENST00000366894 ANKRD30BQ9BXX2 1392 aa22.56■■□□□ 1.2
PRKN-203ENST00000366894 PHLPP1O60346 1717 aa22.56■■□□□ 1.2
PRKN-203ENST00000366894 SETD1AO15047 1707 aaKnown RBP22.55■■□□□ 1.2
PRKN-203ENST00000366894 XRN1Q8IZH2 1706 aaKnown RBP22.55■■□□□ 1.2
PRKN-203ENST00000366894 IFT172Q9UG01 1749 aa22.55■■□□□ 1.2
PRKN-203ENST00000366894 RGL3Q3MIN7 710 aa22.55■■□□□ 1.2
PRKN-203ENST00000366894 AMOTL2Q9Y2J4 779 aa22.54■■□□□ 1.2
PRKN-203ENST00000366894 JCADQ9P266 1359 aa22.53■■□□□ 1.2
PRKN-203ENST00000366894 SLAIN2Q9P270 581 aa22.52■■□□□ 1.2
PRKN-203ENST00000366894 ADGRF5Q8IZF2 1346 aa22.52■■□□□ 1.2
PRKN-203ENST00000366894 NCOA3Q9Y6Q9 1424 aa22.49■■□□□ 1.19
PRKN-203ENST00000366894 PCGF6Q9BYE7 350 aa22.48■■□□□ 1.19
PRKN-203ENST00000366894 COL16A1Q07092 1604 aaPredicted RBP22.47■■□□□ 1.19
PRKN-203ENST00000366894 STAC3Q96MF2 364 aa22.47■■□□□ 1.19
PRKN-203ENST00000366894 PIK3C2GO75747 1445 aa22.44■■□□□ 1.18
PRKN-203ENST00000366894 C14orf37Q86TY3 774 aa22.43■■□□□ 1.18
PRKN-203ENST00000366894 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.43■■□□□ 1.18
PRKN-203ENST00000366894 NRXN1Q9ULB1 1477 aa22.42■■□□□ 1.18
PRKN-203ENST00000366894 PRAG1Q86YV5 1406 aa22.42■■□□□ 1.18
PRKN-203ENST00000366894 SPATA31A6Q5VVP1 1343 aa22.42■■□□□ 1.18
PRKN-203ENST00000366894 MYOM2P54296 1465 aa22.41■■□□□ 1.18
PRKN-203ENST00000366894 C19orf44Q9H6X5 657 aa22.41■■□□□ 1.18
PRKN-203ENST00000366894 LRP6O75581 1613 aa22.41■■□□□ 1.18
PRKN-203ENST00000366894 ASXL1Q8IXJ9 1541 aa22.41■■□□□ 1.18
PRKN-203ENST00000366894 MEX3CQ5U5Q3 659 aaKnown RBP22.4■■□□□ 1.18
PRKN-203ENST00000366894 PTCH1Q13635 1447 aa22.4■■□□□ 1.18
PRKN-203ENST00000366894 ROBO2Q9HCK4 1378 aa22.39■■□□□ 1.18
PRKN-203ENST00000366894 AHDC1Q5TGY3 1603 aaPredicted RBP22.39■■□□□ 1.18
PRKN-203ENST00000366894 ZNF772Q68DY9 489 aaPredicted RBP22.38■■□□□ 1.17
PRKN-203ENST00000366894 CADPS2Q86UW7 1296 aa22.38■■□□□ 1.17
PRKN-203ENST00000366894 SHPRHQ149N8 1683 aa22.37■■□□□ 1.17
PRKN-203ENST00000366894 ATF3P18847 181 aa22.36■■□□□ 1.17
PRKN-203ENST00000366894 NALCNQ8IZF0 1738 aa22.36■■□□□ 1.17
PRKN-203ENST00000366894 DCCP43146 1447 aa22.35■■□□□ 1.17
PRKN-203ENST00000366894 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
PRKN-203ENST00000366894 C14orf93Q9H972 538 aaKnown RBP22.35■■□□□ 1.17
PRKN-203ENST00000366894 DHX57Q6P158 1386 aaKnown RBP22.35■■□□□ 1.17
PRKN-203ENST00000366894 TMEM132EQ6IEE7 984 aa22.34■■□□□ 1.17
PRKN-203ENST00000366894 LRPPRCP42704 1394 aaKnown RBP22.33■■□□□ 1.17
PRKN-203ENST00000366894 CFAP70Q5T0N1 1121 aa22.32■■□□□ 1.16
PRKN-203ENST00000366894 TECPR2O15040 1411 aa22.31■■□□□ 1.16
PRKN-203ENST00000366894 ABCC11Q96J66 1382 aa22.3■■□□□ 1.16
PRKN-203ENST00000366894 LAMC1P11047 1609 aa22.3■■□□□ 1.16
PRKN-203ENST00000366894 MST1RQ04912 1400 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms