RNA–Protein interactions for RNA: ENST00000361320.4

LRRTM3-201, Transcript of leucine rich repeat transmembrane neuronal 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM3, Length 4,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3-201ENST00000361320 PTPN23Q9H3S7 1636 aa9.15□□□□□ -0.94
LRRTM3-201ENST00000361320 SYCP2Q9BX26 1530 aa9.15□□□□□ -0.94
LRRTM3-201ENST00000361320 UBAP1LF5GYI3 381 aa9.15□□□□□ -0.94
LRRTM3-201ENST00000361320 SLC12A5Q9H2X9 1139 aa9.15□□□□□ -0.94
LRRTM3-201ENST00000361320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRTM3-201ENST00000361320 C1orf141Q5JVX7 400 aa9.15□□□□□ -0.95
LRRTM3-201ENST00000361320 NLRP13Q86W25 1043 aa9.15□□□□□ -0.95
LRRTM3-201ENST00000361320 CTTNBP2Q8WZ74 1663 aa9.15□□□□□ -0.95
LRRTM3-201ENST00000361320 FOXO3O43524 673 aa9.15□□□□□ -0.95
LRRTM3-201ENST00000361320 RAPGEF4Q8WZA2 1011 aa9.15□□□□□ -0.95
LRRTM3-201ENST00000361320 PRDM11Q9NQV5 511 aa9.14□□□□□ -0.95
LRRTM3-201ENST00000361320 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
LRRTM3-201ENST00000361320 KDM5BQ9UGL1 1544 aa9.14□□□□□ -0.95
LRRTM3-201ENST00000361320 NBPF8Q3BBV2 869 aa9.13□□□□□ -0.95
LRRTM3-201ENST00000361320 RRP7AQ9Y3A4 280 aaKnown RBP9.13□□□□□ -0.95
LRRTM3-201ENST00000361320 TEFQ10587 303 aa9.13□□□□□ -0.95
LRRTM3-201ENST00000361320 WDR97A6NE52 1622 aa9.13□□□□□ -0.95
LRRTM3-201ENST00000361320 ADGRF5Q8IZF2 1346 aa9.13□□□□□ -0.95
LRRTM3-201ENST00000361320 MAP3K1Q13233 1512 aa9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 RTEL1-TNFRSF6BF6WH68 1400 aa9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 ADAMTS2O95450 1211 aa9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 ZC3H6P61129 1189 aaKnown RBP9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 CALD1Q05682 793 aaKnown RBP9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 NCKAP5LQ9HCH0 1330 aa9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 OS9Q13438 667 aaPredicted RBP9.12□□□□□ -0.95
LRRTM3-201ENST00000361320 DIAPH1O60610 1272 aaKnown RBP9.11□□□□□ -0.95
LRRTM3-201ENST00000361320 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
LRRTM3-201ENST00000361320 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
LRRTM3-201ENST00000361320 NUDT16Q96DE0 195 aaKnown RBP9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 CHD1O14646 1710 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 TOM1O60784 492 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 UHRF1BP1LA0JNW5 1464 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 HMOX1P09601 288 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 STK31Q9BXU1 1019 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 TOM1L2Q6ZVM7 507 aa9.1□□□□□ -0.95
LRRTM3-201ENST00000361320 FAM135AQ9P2D6 1515 aa9.09□□□□□ -0.95
LRRTM3-201ENST00000361320 CADPS2Q86UW7 1296 aa9.09□□□□□ -0.95
LRRTM3-201ENST00000361320 GOLGA2Q08379 1002 aa9.09□□□□□ -0.95
LRRTM3-201ENST00000361320 ZNF692Q9BU19 519 aaPredicted RBP9.09□□□□□ -0.95
LRRTM3-201ENST00000361320 LMOD3Q0VAK6 560 aa9.09□□□□□ -0.95
LRRTM3-201ENST00000361320 TTC5Q8N0Z6 440 aa9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 KIF7Q2M1P5 1343 aa9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 NGEFQ8N5V2 710 aa9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 PHF8Q9UPP1 1060 aa9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 NGLY1Q96IV0 654 aa9.08□□□□□ -0.96
LRRTM3-201ENST00000361320 NOS1P29475 1434 aa9.07□□□□□ -0.96
LRRTM3-201ENST00000361320 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
LRRTM3-201ENST00000361320 ATP10AO60312 1499 aa9.07□□□□□ -0.96
LRRTM3-201ENST00000361320 ERCC6L2Q5T890 1561 aa9.07□□□□□ -0.96
LRRTM3-201ENST00000361320 CCER2I3L3R5 266 aa9.07□□□□□ -0.96
LRRTM3-201ENST00000361320 MYBBP1AQ9BQG0 1328 aaKnown RBP9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 MTHFSP49914 203 aa9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 CHMP4AQ9BY43 222 aa9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 UPF2Q9HAU5 1272 aaKnown RBP9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 SF3B2Q13435 895 aaKnown RBP9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 DDX54Q8TDD1 881 aaKnown RBP9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 TMX4Q9H1E5 349 aaPredicted RBP9.06□□□□□ -0.96
LRRTM3-201ENST00000361320 CHMP3Q9Y3E7 222 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 SLC4A10Q6U841 1118 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 PRKRIP1Q9H875 184 aaPredicted RBP9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 PTPRKQ15262 1439 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 MSH6P52701 1360 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 HSP90AA1P07900 732 aaKnown RBP9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 MS4A1P11836 297 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 EIF2S2P20042 333 aaKnown RBP9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
LRRTM3-201ENST00000361320 DUOX2Q9NRD8 1548 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 UHRF1BP1Q6BDS2 1440 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 APAF1O14727 1248 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 NEO1Q92859 1461 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 APBB1O00213 710 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 NECTIN2Q92692 538 aa9.04□□□□□ -0.96
LRRTM3-201ENST00000361320 WASLO00401 505 aaPredicted RBP9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 PDE3BQ13370 1112 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 RRS1Q15050 365 aaKnown RBP9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 CCDC7Q96M83 1385 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 CHMP4BQ9H444 224 aaKnown RBP9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 SMC4Q9NTJ3 1288 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 ATAD2Q6PL18 1390 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 IPO8O15397 1037 aaKnown RBP9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 KRT28Q7Z3Y7 464 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 C14orf93Q9H972 538 aaKnown RBP9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 KCNA6P17658 529 aa9.03□□□□□ -0.96
LRRTM3-201ENST00000361320 TSPOAP1O95153 1857 aa9.02□□□□□ -0.96
LRRTM3-201ENST00000361320 RIPK4P57078 832 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 TATP17735 454 aaPredicted RBP9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 TAF7LQ5H9L4 462 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 CLUAP1Q96AJ1 413 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 CNTLNQ9NXG0 1405 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 RIMS2Q9UQ26 1411 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 LMTK3Q96Q04 1460 aa9.02□□□□□ -0.97
LRRTM3-201ENST00000361320 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
LRRTM3-201ENST00000361320 TCERG1O14776 1098 aaKnown RBP9.01□□□□□ -0.97
LRRTM3-201ENST00000361320 C19orf44Q9H6X5 657 aa9.01□□□□□ -0.97
LRRTM3-201ENST00000361320 WASHC2AQ641Q2 1341 aa9□□□□□ -0.97
LRRTM3-201ENST00000361320 SULT6B1Q6IMI4 303 aa9□□□□□ -0.97
LRRTM3-201ENST00000361320 RBM42Q9BTD8 480 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms