RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 STAC3Q96MF2 364 aa16.8■□□□□ 0.28
SPTSSB-201ENST00000359175 NESP48681 1621 aa16.79■□□□□ 0.28
SPTSSB-201ENST00000359175 RTEL1-TNFRSF6BF6WH68 1400 aa16.79■□□□□ 0.28
SPTSSB-201ENST00000359175 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
SPTSSB-201ENST00000359175 DYNC1I1O14576 645 aa16.78■□□□□ 0.28
SPTSSB-201ENST00000359175 R3HCC1Q9Y3T6 440 aaKnown RBP16.78■□□□□ 0.28
SPTSSB-201ENST00000359175 KIAA0586Q9BVV6 1533 aa16.77■□□□□ 0.28
SPTSSB-201ENST00000359175 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.27
SPTSSB-201ENST00000359175 BCAR3O75815 825 aa16.77■□□□□ 0.27
SPTSSB-201ENST00000359175 PKD2Q13563 968 aa16.77■□□□□ 0.27
SPTSSB-201ENST00000359175 PRDM10Q9NQV6 1147 aa16.77■□□□□ 0.27
SPTSSB-201ENST00000359175 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 NASPP49321 788 aaPredicted RBP16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 ANKRD30AQ9BXX3 1397 aa16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 UQCRHLA0A096LP55 91 aa16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 UQCRHP07919 91 aa16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 NAP1L2Q9ULW6 460 aaPredicted RBP16.76■□□□□ 0.27
SPTSSB-201ENST00000359175 PMFBP1Q8TBY8 1022 aa16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 COL17A1Q9UMD9 1497 aaPredicted RBP16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 LAMC3Q9Y6N6 1575 aa16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 IBTKQ9P2D0 1353 aaPredicted RBP16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 GBP4Q96PP9 640 aa16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
SPTSSB-201ENST00000359175 CANXP27824 592 aaKnown RBP16.74■□□□□ 0.27
SPTSSB-201ENST00000359175 CIZ1Q9ULV3 898 aaPredicted RBP16.74■□□□□ 0.27
SPTSSB-201ENST00000359175 TNPO1Q92973 898 aaKnown RBP16.74■□□□□ 0.27
SPTSSB-201ENST00000359175 CEP170Q5SW79 1584 aa16.73■□□□□ 0.27
SPTSSB-201ENST00000359175 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
SPTSSB-201ENST00000359175 HSCBQ8IWL3 235 aa16.73■□□□□ 0.27
SPTSSB-201ENST00000359175 NOL7Q9UMY1 257 aaKnown RBP16.73■□□□□ 0.27
SPTSSB-201ENST00000359175 ADGBQ8N7X0 1667 aa16.73■□□□□ 0.27
SPTSSB-201ENST00000359175 CCDC94Q9BW85 323 aaPredicted RBP16.72■□□□□ 0.27
SPTSSB-201ENST00000359175 PANK3Q9H999 370 aa16.71■□□□□ 0.27
SPTSSB-201ENST00000359175 RAD54L2Q9Y4B4 1467 aa16.71■□□□□ 0.27
SPTSSB-201ENST00000359175 TRPM1Q7Z4N2 1603 aa16.71■□□□□ 0.27
SPTSSB-201ENST00000359175 RAB3GAP1Q15042 981 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 PDZRN3Q9UPQ7 1066 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 CSPP1Q1MSJ5 1256 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 SMC5Q8IY18 1101 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 CAMSAP2Q08AD1 1489 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 CADPSQ9ULU8 1353 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 E9PSI1 815 aa16.7■□□□□ 0.26
SPTSSB-201ENST00000359175 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
SPTSSB-201ENST00000359175 COG6Q9Y2V7 657 aa16.69■□□□□ 0.26
SPTSSB-201ENST00000359175 SNX21Q969T3 373 aa16.69■□□□□ 0.26
SPTSSB-201ENST00000359175 KDM2AQ9Y2K7 1162 aa16.69■□□□□ 0.26
SPTSSB-201ENST00000359175 CDK13Q14004 1512 aaKnown RBP16.68■□□□□ 0.26
SPTSSB-201ENST00000359175 KIF20AO95235 890 aa16.68■□□□□ 0.26
SPTSSB-201ENST00000359175 ADGRL2O95490 1459 aa16.68■□□□□ 0.26
SPTSSB-201ENST00000359175 IPO4Q8TEX9 1081 aaKnown RBP16.68■□□□□ 0.26
SPTSSB-201ENST00000359175 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.68■□□□□ 0.26
SPTSSB-201ENST00000359175 ARID3AQ99856 593 aa16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 CHMP4BQ9H444 224 aaKnown RBP16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 PPP2R1AP30153 589 aa16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 PANK1Q8TE04 598 aa16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 GTPBP4Q9BZE4 634 aaKnown RBP16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 TMEM51Q9NW97 253 aa16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 LAMC1P11047 1609 aa16.67■□□□□ 0.26
SPTSSB-201ENST00000359175 MCM5P33992 734 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 SASS6Q6UVJ0 657 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 ZNF644Q9H582 1327 aaPredicted RBP16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 ABCC2Q92887 1545 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 DNMBPQ6XZF7 1577 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 TNNT2P45379 298 aaPredicted RBP16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 TAF7LQ5H9L4 462 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 PDLIM2Q96JY6 352 aa16.66■□□□□ 0.26
SPTSSB-201ENST00000359175 GPRASP1Q5JY77 1395 aa16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 POLA1P09884 1462 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 MFAP1P55081 439 aaKnown RBP16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 KDM5DQ9BY66 1539 aa16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 PCDHB15Q9Y5E8 787 aa16.65■□□□□ 0.26
SPTSSB-201ENST00000359175 TESK2Q96S53 571 aa16.64■□□□□ 0.25
SPTSSB-201ENST00000359175 KLHL40Q2TBA0 621 aa16.64■□□□□ 0.25
SPTSSB-201ENST00000359175 PRAG1Q86YV5 1406 aa16.64■□□□□ 0.25
SPTSSB-201ENST00000359175 CLEC17AQ6ZS10 378 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 ZKSCAN5Q9Y2L8 839 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 ZNF445P59923 1031 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 NGEFQ8N5V2 710 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 ARHGAP31Q2M1Z3 1444 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 WDR62O43379 1518 aa16.63■□□□□ 0.25
SPTSSB-201ENST00000359175 PRDM15P57071 1507 aaPredicted RBP16.62■□□□□ 0.25
SPTSSB-201ENST00000359175 LETM1O95202 739 aaPredicted RBP16.62■□□□□ 0.25
SPTSSB-201ENST00000359175 PIK3C2GO75747 1445 aa16.62■□□□□ 0.25
SPTSSB-201ENST00000359175 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
SPTSSB-201ENST00000359175 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
SPTSSB-201ENST00000359175 EIF4G3O43432 1585 aaKnown RBP16.61■□□□□ 0.25
SPTSSB-201ENST00000359175 CROCC2H7BZ55 1655 aa16.61■□□□□ 0.25
SPTSSB-201ENST00000359175 GOLGA6L22H0YM25 854 aa16.6■□□□□ 0.25
SPTSSB-201ENST00000359175 SHROOM2Q13796 1616 aa16.59■□□□□ 0.25
SPTSSB-201ENST00000359175 APAF1O14727 1248 aa16.59■□□□□ 0.25
SPTSSB-201ENST00000359175 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
SPTSSB-201ENST00000359175 ANKRD50Q9ULJ7 1429 aa16.58■□□□□ 0.25
SPTSSB-201ENST00000359175 TMF1P82094 1093 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms