RNA–Protein interactions for RNA: ENST00000357490.6

COPS7B-202, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 4

Gene COPS7B, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-202ENST00000357490 SLC52A1Q9NWF4 448 aa23.81■■□□□ 1.4
COPS7B-202ENST00000357490 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
COPS7B-202ENST00000357490 LRRC7Q96NW7 1537 aa23.8■■□□□ 1.4
COPS7B-202ENST00000357490 FOXD1Q16676 465 aa23.8■■□□□ 1.4
COPS7B-202ENST00000357490 PCGF6Q9BYE7 350 aa23.8■■□□□ 1.4
COPS7B-202ENST00000357490 MYO5BQ9ULV0 1848 aa23.78■■□□□ 1.4
COPS7B-202ENST00000357490 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
COPS7B-202ENST00000357490 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
COPS7B-202ENST00000357490 SPHKAPQ2M3C7 1700 aa23.74■■□□□ 1.39
COPS7B-202ENST00000357490 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
COPS7B-202ENST00000357490 TMEM131LA2VDJ0 1609 aa23.7■■□□□ 1.39
COPS7B-202ENST00000357490 HSPA1LP34931 641 aa23.7■■□□□ 1.38
COPS7B-202ENST00000357490 TRPM2O94759 1503 aa23.67■■□□□ 1.38
COPS7B-202ENST00000357490 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
COPS7B-202ENST00000357490 ILDR2Q71H61 639 aa23.65■■□□□ 1.38
COPS7B-202ENST00000357490 CLTCL1P53675 1640 aa23.64■■□□□ 1.38
COPS7B-202ENST00000357490 ZFYVE9O95405 1425 aa23.64■■□□□ 1.37
COPS7B-202ENST00000357490 CHGAP10645 457 aaKnown RBP23.63■■□□□ 1.37
COPS7B-202ENST00000357490 KCNA6P17658 529 aa23.63■■□□□ 1.37
COPS7B-202ENST00000357490 NWD1Q149M9 1564 aa23.63■■□□□ 1.37
COPS7B-202ENST00000357490 SLC26A8Q96RN1 970 aa23.63■■□□□ 1.37
COPS7B-202ENST00000357490 CHD2O14647 1828 aaKnown RBP23.62■■□□□ 1.37
COPS7B-202ENST00000357490 BCANQ96GW7 911 aa23.62■■□□□ 1.37
COPS7B-202ENST00000357490 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
COPS7B-202ENST00000357490 RIMS2Q9UQ26 1411 aa23.61■■□□□ 1.37
COPS7B-202ENST00000357490 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
COPS7B-202ENST00000357490 PLEKHG1Q9ULL1 1385 aa23.61■■□□□ 1.37
COPS7B-202ENST00000357490 MED1Q15648 1581 aaPredicted RBP23.61■■□□□ 1.37
COPS7B-202ENST00000357490 ANKRD30BQ9BXX2 1392 aa23.59■■□□□ 1.37
COPS7B-202ENST00000357490 TMEM94Q12767 1356 aa23.58■■□□□ 1.37
COPS7B-202ENST00000357490 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
COPS7B-202ENST00000357490 DHX57Q6P158 1386 aaKnown RBP23.57■■□□□ 1.36
COPS7B-202ENST00000357490 CCDC144AA2RUR9 1427 aa23.57■■□□□ 1.36
COPS7B-202ENST00000357490 SOCS7O14512 581 aa23.56■■□□□ 1.36
COPS7B-202ENST00000357490 PROSER2Q86WR7 435 aaPredicted RBP23.56■■□□□ 1.36
COPS7B-202ENST00000357490 KIF1BO60333 1816 aa23.55■■□□□ 1.36
COPS7B-202ENST00000357490 DIP2AQ14689 1571 aa23.54■■□□□ 1.36
COPS7B-202ENST00000357490 ZNF326Q5BKZ1 582 aaKnown RBP23.51■■□□□ 1.35
COPS7B-202ENST00000357490 TBX22Q9Y458 520 aa23.51■■□□□ 1.35
COPS7B-202ENST00000357490 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
COPS7B-202ENST00000357490 ROBO1Q9Y6N7 1651 aa23.49■■□□□ 1.35
COPS7B-202ENST00000357490 MSH6P52701 1360 aa23.49■■□□□ 1.35
COPS7B-202ENST00000357490 RGL3Q3MIN7 710 aa23.48■■□□□ 1.35
COPS7B-202ENST00000357490 NUTM2DQ5VT03 806 aaPredicted RBP23.48■■□□□ 1.35
COPS7B-202ENST00000357490 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
COPS7B-202ENST00000357490 SPATA31E1Q6ZUB1 1445 aa23.47■■□□□ 1.35
COPS7B-202ENST00000357490 PIK3R4Q99570 1358 aa23.46■■□□□ 1.35
COPS7B-202ENST00000357490 ADAMTS13Q76LX8 1427 aa23.45■■□□□ 1.34
COPS7B-202ENST00000357490 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
COPS7B-202ENST00000357490 RBM33Q96EV2 1170 aaKnown RBP23.44■■□□□ 1.34
COPS7B-202ENST00000357490 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
COPS7B-202ENST00000357490 SIN3AQ96ST3 1273 aa23.42■■□□□ 1.34
COPS7B-202ENST00000357490 NEXMIFQ5QGS0 1516 aa23.42■■□□□ 1.34
COPS7B-202ENST00000357490 SETBP1Q9Y6X0 1596 aa23.4■■□□□ 1.34
COPS7B-202ENST00000357490 RPGRIP1LQ68CZ1 1315 aa23.4■■□□□ 1.34
COPS7B-202ENST00000357490 NRXN3Q9Y4C0 1643 aa23.39■■□□□ 1.33
COPS7B-202ENST00000357490 SLAIN2Q9P270 581 aa23.38■■□□□ 1.33
COPS7B-202ENST00000357490 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
COPS7B-202ENST00000357490 PHLPP1O60346 1717 aa23.37■■□□□ 1.33
COPS7B-202ENST00000357490 PPLO60437 1756 aa23.37■■□□□ 1.33
COPS7B-202ENST00000357490 NEUROD1Q13562 356 aa23.36■■□□□ 1.33
COPS7B-202ENST00000357490 C14orf37Q86TY3 774 aa23.36■■□□□ 1.33
COPS7B-202ENST00000357490 VGFO15240 615 aaPredicted RBP23.35■■□□□ 1.33
COPS7B-202ENST00000357490 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
COPS7B-202ENST00000357490 IFT172Q9UG01 1749 aa23.33■■□□□ 1.32
COPS7B-202ENST00000357490 C19orf44Q9H6X5 657 aa23.32■■□□□ 1.32
COPS7B-202ENST00000357490 AMOTL2Q9Y2J4 779 aa23.32■■□□□ 1.32
COPS7B-202ENST00000357490 CADPS2Q86UW7 1296 aa23.31■■□□□ 1.32
COPS7B-202ENST00000357490 ADGRF5Q8IZF2 1346 aa23.31■■□□□ 1.32
COPS7B-202ENST00000357490 PTPRUQ92729 1446 aa23.3■■□□□ 1.32
COPS7B-202ENST00000357490 ATF3P18847 181 aa23.29■■□□□ 1.32
COPS7B-202ENST00000357490 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
COPS7B-202ENST00000357490 KDM2AQ9Y2K7 1162 aa23.29■■□□□ 1.32
COPS7B-202ENST00000357490 CCER1Q8TC90 406 aaPredicted RBP23.27■■□□□ 1.32
COPS7B-202ENST00000357490 COL16A1Q07092 1604 aaPredicted RBP23.26■■□□□ 1.31
COPS7B-202ENST00000357490 DCCP43146 1447 aa23.26■■□□□ 1.31
COPS7B-202ENST00000357490 L3MBTL2Q969R5 705 aa23.24■■□□□ 1.31
COPS7B-202ENST00000357490 MYOM2P54296 1465 aa23.24■■□□□ 1.31
COPS7B-202ENST00000357490 AHDC1Q5TGY3 1603 aaPredicted RBP23.23■■□□□ 1.31
COPS7B-202ENST00000357490 METP08581 1390 aa23.23■■□□□ 1.31
COPS7B-202ENST00000357490 JCADQ9P266 1359 aa23.23■■□□□ 1.31
COPS7B-202ENST00000357490 SETD1AO15047 1707 aaKnown RBP23.22■■□□□ 1.31
COPS7B-202ENST00000357490 CLSPNQ9HAW4 1339 aa23.21■■□□□ 1.31
COPS7B-202ENST00000357490 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
COPS7B-202ENST00000357490 NRXN1Q9ULB1 1477 aa23.21■■□□□ 1.31
COPS7B-202ENST00000357490 STAC3Q96MF2 364 aa23.2■■□□□ 1.3
COPS7B-202ENST00000357490 NALCNQ8IZF0 1738 aa23.19■■□□□ 1.3
COPS7B-202ENST00000357490 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
COPS7B-202ENST00000357490 RGS17Q9UGC6 210 aaPredicted RBP23.18■■□□□ 1.3
COPS7B-202ENST00000357490 ADGRL3Q9HAR2 1447 aa23.16■■□□□ 1.3
COPS7B-202ENST00000357490 TONSLQ96HA7 1378 aa23.16■■□□□ 1.3
COPS7B-202ENST00000357490 CFAP70Q5T0N1 1121 aa23.16■■□□□ 1.3
COPS7B-202ENST00000357490 C14orf93Q9H972 538 aaKnown RBP23.15■■□□□ 1.3
COPS7B-202ENST00000357490 NHSL1Q5SYE7 1610 aa23.14■■□□□ 1.29
COPS7B-202ENST00000357490 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
COPS7B-202ENST00000357490 ASXL1Q8IXJ9 1541 aa23.13■■□□□ 1.29
COPS7B-202ENST00000357490 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
COPS7B-202ENST00000357490 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
COPS7B-202ENST00000357490 MST1RQ04912 1400 aa23.13■■□□□ 1.29
COPS7B-202ENST00000357490 TMEM132EQ6IEE7 984 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms