RNA–Protein interactions for RNA: ENST00000357396.7

CEACAM3-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,316 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-202ENST00000357396 CLTCL1P53675 1640 aa29.57■■■□□ 2.32
CEACAM3-202ENST00000357396 KIF1BO60333 1816 aa29.55■■■□□ 2.32
CEACAM3-202ENST00000357396 CHGAP10645 457 aaKnown RBP29.55■■■□□ 2.32
CEACAM3-202ENST00000357396 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.53■■■□□ 2.32
CEACAM3-202ENST00000357396 STRCP1A6NGW2 1772 aa29.53■■■□□ 2.32
CEACAM3-202ENST00000357396 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
CEACAM3-202ENST00000357396 PPP1R15AO75807 674 aaPredicted RBP29.48■■■□□ 2.31
CEACAM3-202ENST00000357396 RAB3GAP2Q9H2M9 1393 aa29.48■■■□□ 2.31
CEACAM3-202ENST00000357396 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
CEACAM3-202ENST00000357396 DIP2AQ14689 1571 aa29.45■■■□□ 2.3
CEACAM3-202ENST00000357396 LRRC7Q96NW7 1537 aa29.41■■■□□ 2.3
CEACAM3-202ENST00000357396 BCANQ96GW7 911 aa29.41■■■□□ 2.3
CEACAM3-202ENST00000357396 NWD1Q149M9 1564 aa29.41■■■□□ 2.3
CEACAM3-202ENST00000357396 SLC26A8Q96RN1 970 aa29.4■■■□□ 2.3
CEACAM3-202ENST00000357396 NEXMIFQ5QGS0 1516 aa29.4■■■□□ 2.3
CEACAM3-202ENST00000357396 HRCP23327 699 aa29.39■■■□□ 2.3
CEACAM3-202ENST00000357396 ZNF326Q5BKZ1 582 aaKnown RBP29.38■■■□□ 2.29
CEACAM3-202ENST00000357396 CHD2O14647 1828 aaKnown RBP29.37■■■□□ 2.29
CEACAM3-202ENST00000357396 CCDC144AA2RUR9 1427 aa29.37■■■□□ 2.29
CEACAM3-202ENST00000357396 NKTRP30414 1462 aaKnown RBP29.36■■■□□ 2.29
CEACAM3-202ENST00000357396 SETBP1Q9Y6X0 1596 aa29.36■■■□□ 2.29
CEACAM3-202ENST00000357396 KCNA6P17658 529 aa29.35■■■□□ 2.29
CEACAM3-202ENST00000357396 FOXD1Q16676 465 aa29.35■■■□□ 2.29
CEACAM3-202ENST00000357396 TBX22Q9Y458 520 aa29.35■■■□□ 2.29
CEACAM3-202ENST00000357396 ADAMTS13Q76LX8 1427 aa29.34■■■□□ 2.29
CEACAM3-202ENST00000357396 XIRP1Q702N8 1843 aaKnown RBP29.33■■■□□ 2.29
CEACAM3-202ENST00000357396 NRXN3Q9Y4C0 1643 aa29.32■■■□□ 2.28
CEACAM3-202ENST00000357396 PIK3R4Q99570 1358 aa29.32■■■□□ 2.28
CEACAM3-202ENST00000357396 UBAP1LF5GYI3 381 aa29.32■■■□□ 2.28
CEACAM3-202ENST00000357396 NUTM2DQ5VT03 806 aaPredicted RBP29.32■■■□□ 2.28
CEACAM3-202ENST00000357396 PPLO60437 1756 aa29.31■■■□□ 2.28
CEACAM3-202ENST00000357396 RPGRIP1LQ68CZ1 1315 aa29.31■■■□□ 2.28
CEACAM3-202ENST00000357396 TOM1O60784 492 aa29.27■■■□□ 2.28
CEACAM3-202ENST00000357396 SPATA31E1Q6ZUB1 1445 aa29.25■■■□□ 2.27
CEACAM3-202ENST00000357396 SENP3Q9H4L4 574 aaPredicted RBP29.24■■■□□ 2.27
CEACAM3-202ENST00000357396 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
CEACAM3-202ENST00000357396 IFT172Q9UG01 1749 aa29.23■■■□□ 2.27
CEACAM3-202ENST00000357396 TMEM94Q12767 1356 aa29.21■■■□□ 2.27
CEACAM3-202ENST00000357396 ALKQ9UM73 1620 aa29.21■■■□□ 2.27
CEACAM3-202ENST00000357396 PROSER2Q86WR7 435 aaPredicted RBP29.2■■■□□ 2.26
CEACAM3-202ENST00000357396 XRN1Q8IZH2 1706 aaKnown RBP29.18■■■□□ 2.26
CEACAM3-202ENST00000357396 NCOA3Q9Y6Q9 1424 aa29.17■■■□□ 2.26
CEACAM3-202ENST00000357396 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
CEACAM3-202ENST00000357396 ANKRD30BQ9BXX2 1392 aa29.16■■■□□ 2.26
CEACAM3-202ENST00000357396 PTPRUQ92729 1446 aa29.13■■■□□ 2.25
CEACAM3-202ENST00000357396 METP08581 1390 aa29.12■■■□□ 2.25
CEACAM3-202ENST00000357396 AMOTL2Q9Y2J4 779 aa29.11■■■□□ 2.25
CEACAM3-202ENST00000357396 MSH6P52701 1360 aa29.11■■■□□ 2.25
CEACAM3-202ENST00000357396 PIP4K2BP78356 416 aa29.1■■■□□ 2.25
CEACAM3-202ENST00000357396 RGL3Q3MIN7 710 aa29.1■■■□□ 2.25
CEACAM3-202ENST00000357396 SCAF1Q9H7N4 1312 aaKnown RBP29.09■■■□□ 2.25
CEACAM3-202ENST00000357396 MYOM2P54296 1465 aa29.05■■■□□ 2.24
CEACAM3-202ENST00000357396 PRAG1Q86YV5 1406 aa29.05■■■□□ 2.24
CEACAM3-202ENST00000357396 RBM33Q96EV2 1170 aaKnown RBP29.04■■■□□ 2.24
CEACAM3-202ENST00000357396 PIK3C2GO75747 1445 aa29.03■■■□□ 2.24
CEACAM3-202ENST00000357396 ADGRF5Q8IZF2 1346 aa29.03■■■□□ 2.24
CEACAM3-202ENST00000357396 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.01■■■□□ 2.23
CEACAM3-202ENST00000357396 LAMC1P11047 1609 aa29.01■■■□□ 2.23
CEACAM3-202ENST00000357396 PTCH1Q13635 1447 aa29.01■■■□□ 2.23
CEACAM3-202ENST00000357396 NRXN1Q9ULB1 1477 aa29■■■□□ 2.23
CEACAM3-202ENST00000357396 FAM135BQ49AJ0 1406 aa28.99■■■□□ 2.23
CEACAM3-202ENST00000357396 C14orf37Q86TY3 774 aa28.98■■■□□ 2.23
CEACAM3-202ENST00000357396 DCCP43146 1447 aa28.98■■■□□ 2.23
CEACAM3-202ENST00000357396 C19orf44Q9H6X5 657 aa28.97■■■□□ 2.23
CEACAM3-202ENST00000357396 ROBO1Q9Y6N7 1651 aa28.95■■■□□ 2.23
CEACAM3-202ENST00000357396 HSPA1LP34931 641 aa28.94■■■□□ 2.22
CEACAM3-202ENST00000357396 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
CEACAM3-202ENST00000357396 CADPS2Q86UW7 1296 aa28.94■■■□□ 2.22
CEACAM3-202ENST00000357396 KNDC1Q76NI1 1749 aa28.93■■■□□ 2.22
CEACAM3-202ENST00000357396 NALCNQ8IZF0 1738 aa28.93■■■□□ 2.22
CEACAM3-202ENST00000357396 STAC3Q96MF2 364 aa28.93■■■□□ 2.22
CEACAM3-202ENST00000357396 ADGRL3Q9HAR2 1447 aa28.91■■■□□ 2.22
CEACAM3-202ENST00000357396 ATF3P18847 181 aa28.91■■■□□ 2.22
CEACAM3-202ENST00000357396 SLAIN2Q9P270 581 aa28.91■■■□□ 2.22
CEACAM3-202ENST00000357396 ASXL1Q8IXJ9 1541 aa28.91■■■□□ 2.22
CEACAM3-202ENST00000357396 TECPR2O15040 1411 aa28.89■■■□□ 2.22
CEACAM3-202ENST00000357396 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
CEACAM3-202ENST00000357396 LRPPRCP42704 1394 aaKnown RBP28.87■■■□□ 2.21
CEACAM3-202ENST00000357396 C14orf93Q9H972 538 aaKnown RBP28.87■■■□□ 2.21
CEACAM3-202ENST00000357396 ABCC11Q96J66 1382 aa28.84■■■□□ 2.21
CEACAM3-202ENST00000357396 DCAF11Q8TEB1 546 aa28.83■■■□□ 2.21
CEACAM3-202ENST00000357396 YTHDC2Q9H6S0 1430 aaKnown RBP28.83■■■□□ 2.21
CEACAM3-202ENST00000357396 DHX57Q6P158 1386 aaKnown RBP28.82■■■□□ 2.2
CEACAM3-202ENST00000357396 PHLPP1O60346 1717 aa28.79■■■□□ 2.2
CEACAM3-202ENST00000357396 MST1RQ04912 1400 aa28.79■■■□□ 2.2
CEACAM3-202ENST00000357396 CFAP70Q5T0N1 1121 aa28.79■■■□□ 2.2
CEACAM3-202ENST00000357396 TMEM132EQ6IEE7 984 aa28.78■■■□□ 2.2
CEACAM3-202ENST00000357396 CDC42BPGQ6DT37 1551 aa28.77■■■□□ 2.2
CEACAM3-202ENST00000357396 STK26Q9P289 416 aa28.76■■■□□ 2.19
CEACAM3-202ENST00000357396 KDM2AQ9Y2K7 1162 aa28.76■■■□□ 2.19
CEACAM3-202ENST00000357396 ADGRB1O14514 1584 aa28.76■■■□□ 2.19
CEACAM3-202ENST00000357396 AHDC1Q5TGY3 1603 aaPredicted RBP28.76■■■□□ 2.19
CEACAM3-202ENST00000357396 SIRT1Q96EB6 747 aa28.75■■■□□ 2.19
CEACAM3-202ENST00000357396 DLC1Q96QB1 1528 aa28.74■■■□□ 2.19
CEACAM3-202ENST00000357396 KIAA1210Q9ULL0 1709 aa28.73■■■□□ 2.19
CEACAM3-202ENST00000357396 COL16A1Q07092 1604 aaPredicted RBP28.71■■■□□ 2.19
CEACAM3-202ENST00000357396 MED1Q15648 1581 aaPredicted RBP28.71■■■□□ 2.19
CEACAM3-202ENST00000357396 NHSL1Q5SYE7 1610 aa28.7■■■□□ 2.18
CEACAM3-202ENST00000357396 BRINP3Q76B58 766 aa28.69■■■□□ 2.18
CEACAM3-202ENST00000357396 C1orf167Q5SNV9 1468 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms